prot_H-elongata_contig61880.13749.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig61880.13749.1
Unique Nameprot_H-elongata_contig61880.13749.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length247
Homology
BLAST of mRNA_H-elongata_contig61880.13749.1 vs. uniprot
Match: D8LR58_ECTSI (Protein CLP1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR58_ECTSI)

HSP 1 Score: 443 bits (1139), Expect = 3.290e-153
Identity = 217/247 (87.85%), Postives = 233/247 (94.33%), Query Frame = 0
Query:    1 MFGIELAVEHEYRFSSAKAAIFTWYGCTLETTGWVSSVYVAQETPMKAYVNTHAQLEAKRDKALQALQTGNTSVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTIPGSIAAAALDSNSMSVEEGFSLTAPLVLFYGHTSLQENPELYKVLVERMAECLKRRVANDIDASASGAVFNTCGWVEGLGLQLLLHAIKTFEIDVVLVMKHDRLYADMNANLPRSIAVINLPRSGG 247
            MFGIELA E+EY+FSS KAA+FTWYGCT+ETTGWVSS+YVAQETPMK+YVNTHAQLEA+RDKALQALQ G T++TGPRVMVVGE DSGKSTLANILAAYAVRLGRCPTFVDLDVGQGM+T+PG IAAAALDSNSMSVEEGFSLTAPLVLFYGHTSLQENPEL+K LV RMAECLKRRVANDIDASASGA+FNTCGWVEGLGL+LL HAI   +IDVVLVMKHDRLYADM A LPRS+AVINLPRSGG
Sbjct:   42 MFGIELAAEYEYKFSSTKAAVFTWYGCTIETTGWVSSIYVAQETPMKSYVNTHAQLEARRDKALQALQAGRTNITGPRVMVVGEADSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMITVPGGIAAAALDSNSMSVEEGFSLTAPLVLFYGHTSLQENPELFKKLVGRMAECLKRRVANDIDASASGAIFNTCGWVEGLGLELLAHAITVLDIDVVLVMKHDRLYADMVATLPRSVAVINLPRSGG 288          
BLAST of mRNA_H-elongata_contig61880.13749.1 vs. uniprot
Match: A0A6H5KLD2_9PHAE (Protein CLP1 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLD2_9PHAE)

HSP 1 Score: 440 bits (1131), Expect = 9.690e-143
Identity = 215/247 (87.04%), Postives = 232/247 (93.93%), Query Frame = 0
Query:    1 MFGIELAVEHEYRFSSAKAAIFTWYGCTLETTGWVSSVYVAQETPMKAYVNTHAQLEAKRDKALQALQTGNTSVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTIPGSIAAAALDSNSMSVEEGFSLTAPLVLFYGHTSLQENPELYKVLVERMAECLKRRVANDIDASASGAVFNTCGWVEGLGLQLLLHAIKTFEIDVVLVMKHDRLYADMNANLPRSIAVINLPRSGG 247
            MFGIELA E+EY+FSS KAA+FTWYGCT+ETTGWVSS+YVAQETPMK+YVNTHAQLEA+RDKALQALQ G T++TGPRVMVVGE DSGKSTLANILAAYAVRLGRCPTFVDLDVGQGM+ +PG IAAAALDSNSMSVEEGFSLTAPLVLFYGHTSLQENPEL+K LV RMAECLKRR+ANDIDASASGA+FNTCGWVEGLGL+LL HAI   +IDVVLVMKHDRLYADM A LPRS+AVINLPRSGG
Sbjct:   42 MFGIELAAEYEYKFSSTKAAVFTWYGCTIETTGWVSSIYVAQETPMKSYVNTHAQLEARRDKALQALQAGRTNITGPRVMVVGEADSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMIAVPGGIAAAALDSNSMSVEEGFSLTAPLVLFYGHTSLQENPELFKKLVGRMAECLKRRMANDIDASASGAIFNTCGWVEGLGLELLAHAITVLDIDVVLVMKHDRLYADMVATLPRSVAVINLPRSGG 288          
BLAST of mRNA_H-elongata_contig61880.13749.1 vs. uniprot
Match: A0A835YJV7_9STRA (Protein CLP1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJV7_9STRA)

HSP 1 Score: 296 bits (759), Expect = 1.100e-95
Identity = 151/254 (59.45%), Postives = 191/254 (75.20%), Query Frame = 0
Query:    1 MFGIELAVEHEYRFSS-AKAAIFTWYGCTLETTGWVSSVYVAQETPMKAYVNTHAQLEAKRDKALQALQTGNTSVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTIPGSIAAAALDSNSMSVEEGFSLTAPLVLFYGHTSLQENPELYKVLVERMAECLKRRVANDIDASASGAVFNTCGWVEGLGLQLLLHAIKTFEIDVVLVMKHDRLYADMNAN---LPRSI---AVINLPRSGG 247
            +FG+ELAV  EY FS+ AK A+FTWYGC L+TT     +YVA++TPM +YVNTH QLEA+RD+AL  L  G  +V GPRV+V G TDSGKS+L  +L AYAVRLGR PTFVDLDVGQG +TIPG+++A +LDS ++S+EE  SL APL  FYGH S  ENPEL++ +V R+AEC+++R AND DA+A+G V NTCGWV+GLGL+LL H I    ID+VLVM HD+LYA++ A+   LP       V+ LP SGG
Sbjct:   44 IFGVELAVNTEYHFSAGAKVAVFTWYGCKLQTTRTAEVLYVAKDTPMLSYVNTHIQLEARRDQALSKLSKGEKAV-GPRVLVAGATDSGKSSLCAVLCAYAVRLGRTPTFVDLDVGQGEITIPGTVSAVSLDSGTLSIEERLSLAAPLTFFYGHDSPGENPELFRHMVSRLAECVEQRQANDRDAAAAGTVVNTCGWVDGLGLELLRHCIDALSIDIVLVMGHDKLYAELMADSEALPDDAPPRTVVKLPTSGG 296          
BLAST of mRNA_H-elongata_contig61880.13749.1 vs. uniprot
Match: H3GV05_PHYRM (Protein CLP1 homolog n=12 Tax=Phytophthora TaxID=4783 RepID=H3GV05_PHYRM)

HSP 1 Score: 257 bits (656), Expect = 1.940e-80
Identity = 127/253 (50.20%), Postives = 175/253 (69.17%), Query Frame = 0
Query:    1 MFGIELAVEHEYRFSSAKAAIFTWYGCTLETTGWVSSVYVAQETPMKAYVNTHAQLEAKRDKALQALQTGNTSVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTIPGSIAAAALDSNSMSVEEGFSLTAPLVLFYGHTSLQENPELYKVLVERMAECLKRRVANDIDASASGAVFNTCGWVEGLGLQLLLHAIKTFEIDVVLVMKHDRLYADMNANLPRSIA------VINLPRSGG 247
            +FG+ELA++ EY F   K AIFTWYGCTLE  G     Y +++T M +Y+N HAQL+ +R+ A            GPRV+V G  DSGKSTL +ILA YA+RLG  PT V+LDVG G +++PG+++A+ LD NS+S+EE F LT PL  FYGH +  EN EL++   +++A+ +KRR+AND + +ASG V NTCGWV+G+G  LLLHAIK FE+DVVLV+  DRL++ + ++L  + A      ++ L RSGG
Sbjct:   36 LFGVELAIDREYTFRDRKLAIFTWYGCTLEVRGAPEVAYTSEDTTMDSYLNIHAQLQRRRELAKAK------HAAGPRVLVCGPVDSGKSTLTHILANYALRLGEKPTLVELDVGHGCLSVPGTLSASPLDMNSLSIEEDFILTNPLAFFYGHAAASENVELFRYQQQQLAKAVKRRLANDEEVNASGCVINTCGWVDGMGFDLLLHAIKEFEVDVVLVIGQDRLFSRLQSSLTGANANGVDRSIVKLSRSGG 282          
BLAST of mRNA_H-elongata_contig61880.13749.1 vs. uniprot
Match: D0NWZ0_PHYIT (Pre-mRNA cleavage complex II protein Clp1, putative n=2 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NWZ0_PHYIT)

HSP 1 Score: 254 bits (650), Expect = 4.690e-80
Identity = 126/253 (49.80%), Postives = 173/253 (68.38%), Query Frame = 0
Query:    1 MFGIELAVEHEYRFSSAKAAIFTWYGCTLETTGWVSSVYVAQETPMKAYVNTHAQLEAKRDKALQALQTGNTSVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTIPGSIAAAALDSNSMSVEEGFSLTAPLVLFYGHTSLQENPELYKVLVERMAECLKRRVANDIDASASGAVFNTCGWVEGLGLQLLLHAIKTFEIDVVLVMKHDRLYADMNANLPRSIA------VINLPRSGG 247
            +FG+ELA++ EY F   K AIFTWYGCTLE  G +   Y ++ETPM +Y+N HAQL+ +R+ A            GPRV+V G  DSGKSTL  IL  YA+RLG  PT V+LDVGQG +++PG+I+A+ LD NS+S+EE F LT PL  FYGH +  EN EL++   + +++ +KRR+AND + +ASG V NTCGWV+G G  +L+HAIK F++D+VLV+  DRLY+ + + L  + A      ++ L RSGG
Sbjct:   39 LFGVELAIDREYVFRDRKLAIFTWYGCTLEVRGALEEAYTSEETPMDSYLNIHAQLQRRRELAKAK------HAAGPRVLVCGPVDSGKSTLTQILVNYALRLGEKPTLVELDVGQGCLSVPGTISASPLDMNSLSIEEDFILTNPLAYFYGHAASSENVELFRYQQQVLSKAVKRRLANDEEVNASGCVINTCGWVDGTGFDMLVHAIKDFDVDLVLVIGQDRLYSRLQSALTGANANGADRSIVKLSRSGG 285          
BLAST of mRNA_H-elongata_contig61880.13749.1 vs. uniprot
Match: A0A2D4BR80_PYTIN (Protein CLP1 homolog n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BR80_PYTIN)

HSP 1 Score: 255 bits (652), Expect = 7.310e-80
Identity = 122/252 (48.41%), Postives = 177/252 (70.24%), Query Frame = 0
Query:    1 MFGIELAVEHEYRFSSAKAAIFTWYGCTLETTGWVSSVYVAQETPMKAYVNTHAQLEAKRDKALQALQTGNTSVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTIPGSIAAAALDSNSMSVEEGFSLTAPLVLFYGHTSLQENPELYKVLVERMAECLKRRVANDIDASASGAVFNTCGWVEGLGLQLLLHAIKTFEIDVVLVMKHDRLYADMNANLP-----RSIAVINLPRSGG 247
            +FG+ELA+ +EY     KAAIFTWYG TL+ TG     Y ++ETPM +Y+N HAQL+ +R+ A+           GPRV++ G  DSGKSTL  IL  YA+RLG  PT VDLDVGQ  +++PGS+AA  LD N +SVEEG+ LT PLV F+GHTS+ EN E ++  +++++  +KRR+A D++A+ASG + NTCGWV+GLG  LL+ +++ F+ DVVLV+  DRL++ + ++L      ++++++ L RSGG
Sbjct:   33 LFGVELAINNEYTLRDQKAAIFTWYGATLQVTGTPEVAYTSEETPMNSYINIHAQLQKRRELAMLK------GSAGPRVLIAGPVDSGKSTLTQILLNYALRLGEKPTHVDLDVGQNSLSVPGSLAATPLDMNCLSVEEGYVLTNPLVYFFGHTSMSENVEHFRSHLQQLSRAVKRRLAEDVEANASGCIINTCGWVDGLGYDLLVESVRAFDADVVLVIGQDRLFSRLQSSLAQQVTSKNLSIVKLVRSGG 278          
BLAST of mRNA_H-elongata_contig61880.13749.1 vs. uniprot
Match: A0A3R7G6W1_9STRA (Protein CLP1 homolog n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G6W1_9STRA)

HSP 1 Score: 254 bits (648), Expect = 3.000e-79
Identity = 129/253 (50.99%), Postives = 175/253 (69.17%), Query Frame = 0
Query:    1 MFGIELAVEHEYRFSSAKAAIFTWYGCTLETTGWVSSVYVAQETPMKAYVNTHAQLEAKRDKALQALQTGNTSVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTIPGSIAAAALDSNSMSVEEGFSLTAPLVLFYGHTSLQENPELYKVLVERMAECLKRRVANDIDASASGAVFNTCGWVEGLGLQLLLHAIKTFEIDVVLVMKHDRLYADMNANLPRSIA------VINLPRSGG 247
            +FG+ELA++ EY F   K AIFTWYGCTLE  G     Y ++ETPM +Y+N HAQL+ +R+  L   + G     GPRV+V G  DSGKSTL  IL  YA+RLG  PT V+LDVG G +++PG+++A+ LD NS+SVEE F LT PL  FYGHT+  EN EL++   +++A+ +KRR+ ND + +A+G V NTCGWV+G+G  LL+HAIK FE+DVVLV+  DRLY+ + + L  + A      ++ L RSGG
Sbjct:   35 LFGVELAIDREYVFRDRKLAIFTWYGCTLEVRGAPEVAYTSEETPMDSYLNIHAQLQRRRE--LAKAKHG----AGPRVLVCGPVDSGKSTLTQILINYALRLGEKPTLVELDVGHGCISVPGTLSASPLDMNSLSVEEEFILTNPLAFFYGHTAPSENVELFRYQQQQLAKVVKRRLTNDEEVNAAGCVVNTCGWVDGVGFDLLVHAIKEFELDVVLVIGQDRLYSRLQSALTGANAGGVERSILKLSRSGG 281          
BLAST of mRNA_H-elongata_contig61880.13749.1 vs. uniprot
Match: G4YIC2_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YIC2_PHYSP)

HSP 1 Score: 250 bits (639), Expect = 1.950e-78
Identity = 126/253 (49.80%), Postives = 170/253 (67.19%), Query Frame = 0
Query:    1 MFGIELAVEHEYRFSSAKAAIFTWYGCTLETTGWVSSVYVAQETPMKAYVNTHAQLEAKRDKALQALQTGNTSVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTIPGSIAAAALDSNSMSVEEGFSLTAPLVLFYGHTSLQENPELYKVLVERMAECLKRRVANDIDASASGAVFNTCGWVEGLGLQLLLHAIKTFEIDVVLVMKHDRLYADMNANLPRSIA------VINLPRSGG 247
            +FG+ELA+  EY F   K AIFTWYGC LE  G     Y ++ETPM +Y+N HAQL+ +R+ A            GPRV+V G  DSGKSTL  IL  YA+RLG  PT V+LDVG G +++PG+++A+ LD NS+SVEE F LT PL  FYGH +  EN EL++   +++A+ +KRR+AND + +ASG V NTCGWV+G+G  LL+ AIK F++DVVLV+  DRLY+ + + L  + A      ++ L RSGG
Sbjct:   34 LFGVELAIGREYVFRDRKLAIFTWYGCALEVRGAPEVAYTSEETPMDSYLNIHAQLQRRRELAKAK------HAAGPRVLVCGPVDSGKSTLTQILVNYALRLGEKPTLVELDVGHGCLSVPGTLSASPLDMNSLSVEEDFILTNPLAFFYGHAASSENVELFRYQQQQLAKAVKRRLANDEEVNASGCVVNTCGWVDGMGFDLLVQAIKDFDVDVVLVIGQDRLYSRLQSTLAGANANGVDRSIVKLARSGG 280          
BLAST of mRNA_H-elongata_contig61880.13749.1 vs. uniprot
Match: A0A484DUE3_BRELC (Protein CLP1 homolog n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DUE3_BRELC)

HSP 1 Score: 251 bits (640), Expect = 8.450e-78
Identity = 127/253 (50.20%), Postives = 174/253 (68.77%), Query Frame = 0
Query:    1 MFGIELAVEHEYRFSSAKAAIFTWYGCTLETTGWVSSVYVAQETPMKAYVNTHAQLEAKRDKALQALQTGNTSVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTIPGSIAAAALDSNSMSVEEGFSLTAPLVLFYGHTSLQENPELYKVLVERMAECLKRRVANDIDASASGAVFNTCGWVEGLGLQLLLHAIKTFEIDVVLVMKHDRLYADMNANLPRSIA------VINLPRSGG 247
            +FG+ELA++ EY F   K AIFTWYGCTLE  G     Y ++ETPM++Y+N HAQL+ +R+ A +A Q+      GPRV+V G  DSGKSTLA IL  YA+RL   PT V+LDVG+G +++PG+++A  LD NS+S+EE F LT PLV FYGH +  EN EL++   +++A  +  R+ ND + +ASG V NTCGWV+G G +LLLHAIK F +DVVL++  DRLY+ + + L  + A      ++ L RSGG
Sbjct:   37 LFGVELAIDREYAFRDRKLAIFTWYGCTLEVRGAPDEAYTSEETPMESYLNIHAQLQRRRELA-KAKQSA-----GPRVLVCGPVDSGKSTLAQILVNYALRLSEKPTLVELDVGRGFLSVPGTLSATPLDLNSLSIEEDFVLTNPLVYFYGHAASSENVELFRYQQKQLARTVNIRMENDKEVNASGCVINTCGWVDGAGFELLLHAIKDFVVDVVLIIGQDRLYSRLQSALTGANANGVERSIVKLSRSGG 283          
BLAST of mRNA_H-elongata_contig61880.13749.1 vs. uniprot
Match: A0A3M6VIE0_9STRA (Protein CLP1 homolog n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VIE0_9STRA)

HSP 1 Score: 249 bits (637), Expect = 1.380e-77
Identity = 126/253 (49.80%), Postives = 167/253 (66.01%), Query Frame = 0
Query:    1 MFGIELAVEHEYRFSSAKAAIFTWYGCTLETTGWVSSVYVAQETPMKAYVNTHAQLEAKRDKALQALQTGNTSVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTIPGSIAAAALDSNSMSVEEGFSLTAPLVLFYGHTSLQENPELYKVLVERMAECLKRRVANDIDASASGAVFNTCGWVEGLGLQLLLHAIKTFEIDVVLVMKHDRLYADMNANLPRSIA------VINLPRSGG 247
            +FG+ELA++HEY F   K AIFTWYGCTLE  G     Y ++ETPM +Y+N H+QL+  R+ A            GPRV+V G  DSGKSTL  IL  YA+RLG  PT V+LDVG G +++PG+++A+ LD NS+SVEE F LT PL  FYGH    +N EL++   +++A+ +KRR+ ND   +ASG V NTCGWV+G G  LL+HAIK FE+DVVLV+  DRLY+ + + L    A      ++ L RS G
Sbjct:   36 LFGVELAIDHEYVFRDRKVAIFTWYGCTLEVNGAPEVAYTSEETPMDSYLNIHSQLQRCRELAKAK------HAAGPRVLVCGPVDSGKSTLTQILVNYALRLGEKPTLVELDVGHGCLSVPGTLSASPLDMNSLSVEEDFVLTNPLAYFYGHAMSSDNVELFRYQQQQLAKTVKRRLENDAQVNASGCVINTCGWVDGAGFDLLVHAIKDFEVDVVLVIGQDRLYSRLQSTLTGVHANGVDRSIVKLSRSDG 282          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61880.13749.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR58_ECTSI3.290e-15387.85Protein CLP1 homolog n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5KLD2_9PHAE9.690e-14387.04Protein CLP1 homolog n=1 Tax=Ectocarpus sp. CCAP 1... [more]
A0A835YJV7_9STRA1.100e-9559.45Protein CLP1 homolog n=1 Tax=Tribonema minus TaxID... [more]
H3GV05_PHYRM1.940e-8050.20Protein CLP1 homolog n=12 Tax=Phytophthora TaxID=4... [more]
D0NWZ0_PHYIT4.690e-8049.80Pre-mRNA cleavage complex II protein Clp1, putativ... [more]
A0A2D4BR80_PYTIN7.310e-8048.41Protein CLP1 homolog n=1 Tax=Pythium insidiosum Ta... [more]
A0A3R7G6W1_9STRA3.000e-7950.99Protein CLP1 homolog n=3 Tax=Phytophthora kernovia... [more]
G4YIC2_PHYSP1.950e-7849.80Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A484DUE3_BRELC8.450e-7850.20Protein CLP1 homolog n=1 Tax=Bremia lactucae TaxID... [more]
A0A3M6VIE0_9STRA1.380e-7749.80Protein CLP1 homolog n=1 Tax=Peronospora effusa Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 46..66
NoneNo IPR availableGENE3D3.40.50.300coord: 45..247
e-value: 4.4E-74
score: 250.7
NoneNo IPR availablePANTHERPTHR12755:SF6POLYRIBONUCLEOTIDE 5'-HYDROXYL-KINASE CLP1coord: 1..247
NoneNo IPR availablePANTHERPTHR12755CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1Pcoord: 1..247
IPR032319Polyribonucleotide 5'-hydroxyl-kinase Clp1, P-loop domainPFAMPF16575CLP1_Pcoord: 83..247
e-value: 3.6E-56
score: 189.9
IPR038239Clp1, N-terminal beta-sandwich domain superfamilyGENE3D2.60.120.1030coord: 1..44
e-value: 1.6E-12
score: 48.9
IPR032324Clp1, N-terminal beta-sandwich domainPFAMPF16573CLP1_Ncoord: 1..63
e-value: 3.0E-19
score: 69.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 77..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig61880contigH-elongata_contig61880:436..3314 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig61880.13749.1mRNA_H-elongata_contig61880.13749.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig61880 415..3314 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig61880.13749.1 ID=prot_H-elongata_contig61880.13749.1|Name=mRNA_H-elongata_contig61880.13749.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=247bp
MFGIELAVEHEYRFSSAKAAIFTWYGCTLETTGWVSSVYVAQETPMKAYV
NTHAQLEAKRDKALQALQTGNTSVTGPRVMVVGETDSGKSTLANILAAYA
VRLGRCPTFVDLDVGQGMVTIPGSIAAAALDSNSMSVEEGFSLTAPLVLF
YGHTSLQENPELYKVLVERMAECLKRRVANDIDASASGAVFNTCGWVEGL
GLQLLLHAIKTFEIDVVLVMKHDRLYADMNANLPRSIAVINLPRSGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032319CLP1_P
IPR038239Clp1_N_sf
IPR032324Clp1_N
IPR027417P-loop_NTPase