prot_H-elongata_contig6179.13737.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6179.13737.1
Unique Nameprot_H-elongata_contig6179.13737.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length233
Homology
BLAST of mRNA_H-elongata_contig6179.13737.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 338 bits (867), Expect = 7.960e-111
Identity = 167/232 (71.98%), Postives = 196/232 (84.48%), Query Frame = 0
Query:    1 MLDGEFVAITTDDWTSRKNDSHMSLTMTYIDFKWKLHTLFLDCSKHTGTTTREDLAKGIAAMIERHGLTGRVVACVTDCEPSIIKAGCLVEV-GRDLSHIGCFNHRLESTTSSVFNGKSLGALSLARGVVGRYTNSSQMAVRLTAMCGILEISALCMMQDVETRWWSTWAMVNCLLYLMKVIKHHDSIDNINPLLSDTNWKVLRLIDCILEPFMLAKKKLEGAEYVTGSLVI 231
            MLD EFVAITTD WTSR N+S+MSLT+ YID++WKLH L LDC+KHTGTTT EDLA  +A M+ERH LTGRV+ACVTDCEPS+IKAG L+EV G  +SHIGC NHR+ESTTSSVFNG+SLGAL LAR +VGRY  SSQMA RL  +CGIL++  L +MQDVETRWWSTWAMV  LLYLMK IK H+S+D ++PLLSDT+W+VLRLI+ IL PFM A+K LEGA+YVTGS+ I
Sbjct:   35 MLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLGALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTI 266          
BLAST of mRNA_H-elongata_contig6179.13737.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 323 bits (828), Expect = 3.450e-105
Identity = 160/233 (68.67%), Postives = 193/233 (82.83%), Query Frame = 0
Query:    1 MLDGEFVAITTDDWTSRKNDSHMSLTMTYIDFKWKLHTLFLDCSKHTGTTTREDLAKGIAAMIERHGLTGRVVACVTDCEPSIIKAGCLVEVG-RDLSHIGCFNHRLESTTSSVFNGKSLGALSLARGVVGRYTNSSQMAVRLTAMCGILEISALCMMQDVETRWWSTWAMVNCLLYLMKVIKHHDSIDNINPLLSDTNWKVLRLIDCILEPFMLAKKKLEGAEYVTGSLVIP 232
            MLD E+VAITTD WTSR N+S+MSLT+ YID  W+LH L L+C+KHTG+T  EDLA+ I +MIERHGLTGRV ACVTDCEPS++KAG L+EVG  +L HIGC NHR+ESTTSSVFNGKSLGAL+ AR VVGRY  SSQM+ RL    GIL++S L ++QDVETRWWS+WAM+  LLYLMK IK H+S DNI P+LS+T+W+VLRLI+ IL PFM A+K LEGA+YVTGS+ +P
Sbjct:   71 MLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLGALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVP 303          
BLAST of mRNA_H-elongata_contig6179.13737.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 219 bits (557), Expect = 2.900e-65
Identity = 115/232 (49.57%), Postives = 158/232 (68.10%), Query Frame = 0
Query:    2 LDGEFVAITTDDWTSRKNDSHMSLTMTYIDFKWKLHTLFLDCSKHTGTTTREDLAKGIAAMIERHGLTGRVVACVTDCEPSIIKAGCLVEVGRDLSHIGCFNHRLESTTSSVFNGKSLG-ALSLARGVVGRYTNSSQMAVRLTAMCGILEISALCMMQDVETRWWSTWAMVNCLLYLMKVIKHHDSIDNINPLLSDTNWKVLRLIDCILEPFMLAKKKLEGAEYVTGSLVIP 232
            L GE VA+T+D WTS  ND++M  T TYI   + L  L ++C KH G TT EDL + + AMI R+GLT R VA  TDCEPS++KAG L+E    ++H+GCF HRLES TS  F G  +  AL+LAR VV RY  SSQ + RL  M  I+++    ++QDVETRWWST+A +  LL L + I  H+ ID+I PLL + +W+VL++++ + +PF+L++K  E ++ VT SLVIP
Sbjct:   45 LTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIP 276          
BLAST of mRNA_H-elongata_contig6179.13737.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 1.880e-62
Identity = 114/232 (49.14%), Postives = 156/232 (67.24%), Query Frame = 0
Query:    2 LDGEFVAITTDDWTSRKNDSHMSLTMTYIDFKWKLHTLFLDCSKHTGTTTREDLAKGIAAMIERHGLTGRVVACVTDCEPSIIKAGCLVEVGRDLSHIGCFNHRLESTTSSVFNGKSLG-ALSLARGVVGRYTNSSQMAVRLTAMCGILEISALCMMQDVETRWWSTWAMVNCLLYLMKVIKHHDSIDNINPLLSDTNWKVLRLIDCILEPFMLAKKKLEGAEYVTGSLVIP 232
            + GE VA+T+D WT   ND++MS T TYI   + L  L L+C KH   T  EDL + + AMI R+GLTGR VA  TDCE S++KAG L+E    ++H+GCF HRLES TS  F G  +  AL+LARGVV RYT SSQ + RL  +C I+++    ++QDVETRWWST+  +  L+ L + I  H+ ID+  PLL + +W+VL+L++ +L+PFM A+K LE ++ VT  LV P
Sbjct:    1 MTGEHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSP 232          
BLAST of mRNA_H-elongata_contig6179.13737.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 3.040e-54
Identity = 104/216 (48.15%), Postives = 137/216 (63.43%), Query Frame = 0
Query:   16 SRKNDSHMSLTMTYIDFKWKLHTLFLDCSKHTGTTTREDLAKGIAAMIERHGLTGRVVACVTDCEPSIIKAGCLVEVGRDLSHIGCFNHRLESTTSSVFNGKSLG-ALSLARGVVGRYTNSSQMAVRLTAMCGILEISALCMMQDVETRWWSTWAMVNCLLYLMKVIKHHDSIDNINPLLSDTNWKVLRLIDCILEPFMLAKKKLEGAEYVTGSLV 230
            S  ND++M+ T TYI   + L  L L+  KH G TT EDL + + AMI R+GLTGR VA  TDCEP ++KAG L+E    +SH+GCF HR ES TS  F G  +  AL+L RGVV RYT SSQ + RL  MC I+++    ++QDVETRWWST                   ID+I PLL++ +W+VL+L++ +L PFM A+K LE ++ VT SLV
Sbjct:    3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWST----------------PREIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLV 202          
BLAST of mRNA_H-elongata_contig6179.13737.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 1.120e-34
Identity = 79/144 (54.86%), Postives = 99/144 (68.75%), Query Frame = 0
Query:    1 MLDGEFVAITTDDWTSRKNDSHMSLTMTYIDFKWKLHTLFLDCSKHTGTTTREDLAKGIAAMIERHGLTGRVVACVTDCEPSIIKAGCLVEVGRDLS-HIGCFNHRLESTTSSVFNGKSLG-ALSLARGVVGRYTNSSQMAVRL 142
            +++GE V IT+D WTS  ND++MSLT T I   WKL TL +DCSK  GTTT + LA GI A + +HGLTG+V A  TDCEPS++K G L+     +S  IGC N+RLEST+S VFNG  +   + LARG+V RY  SSQ A RL
Sbjct:   35 LIEGEQVCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRL 178          
BLAST of mRNA_H-elongata_contig6179.13737.1 vs. uniprot
Match: A0A224XKI7_9HEMI (Putative hat-25 zm (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224XKI7_9HEMI)

HSP 1 Score: 105 bits (263), Expect = 1.440e-22
Identity = 66/234 (28.21%), Postives = 121/234 (51.71%), Query Frame = 0
Query:    1 MLDGEFVAITTDDWTSRKNDSHMSLTMTYIDFKWKLHTLFLDCSKHTGTTTREDLAKGIAAMIERHGLTGRVVACVTDCEPSIIKAGCLVEVGRDLSHIGCFNHRLESTTSSVFNGKSLGAL-SLARGVVGRYTNSSQMAVRLTAMCGILEISALCMMQDVETRWWSTWAMVNCLLYLMKVIKHHDSI-DNINPLLSDTNWKVLRLIDCILEPFMLAKKKLEGAEYVTGSLVIP 232
            +L G+   ITTD WTS   ++++ +T  ++D  +KLH+L L+CSK   +   ED+A  +  + +  G+  +++  V+D   ++ KA   ++   +  H GCF H +          K + A+    + +V  +  S     +L+        + L ++Q+V+TRW ST+ M+   + L + IK   +I D   P L+   WK+L+ +  IL+P+    K + G +Y T ++VIP
Sbjct:  177 ILTGKSFCITTDSWTSNNTENYIGVTAHFLDENFKLHSLLLECSKTDASHKAEDIAGTLKRITQYWGIDQKIILAVSDNASNMQKA---IQQLLEWKHFGCFAHTINLIVKDALKCKDIQAIVEKVKRIVEYFRRSCTATEKLSRYQATSRNTPLKLIQEVQTRWNSTYYMLERFVSLEEAIKSTMAIIDKDLPKLNFEEWKILKEMCQILKPYENVTKAISGDKYCTAAIVIP 407          
BLAST of mRNA_H-elongata_contig6179.13737.1 vs. uniprot
Match: A0A7E5WZM1_TRINI (zinc finger BED domain-containing protein 1-like n=1 Tax=Trichoplusia ni TaxID=7111 RepID=A0A7E5WZM1_TRINI)

HSP 1 Score: 100 bits (249), Expect = 1.100e-20
Identity = 67/226 (29.65%), Postives = 114/226 (50.44%), Query Frame = 0
Query:    7 VAITTDDWTSRKNDSHMSLTMTYIDFKWKLHTLFLDCSKHTGTTTREDLAKGIAAMIERHGLTGRVVACVTDCEPSIIKAGCLVEVGRDLSHIGCFNHRLESTTSSVFNGKSLGALSLARGVVGRYTNSSQMAVRLTAMCGILEISALCMMQDVETRWWSTWAMVNCLLYLMKVIKHHDSIDNIN-PLLSDTNWKVLRLIDCILEPFMLAKKKLEGAEYVTGSLVI 231
            + ITTD WTSR  +S++++T  YI    +  T+ L C   +G  T  ++A  I+A+I+  GL  ++   V+D   +++KA   ++ G    H GCF H L    +        G +   + +V  Y  S+  + RL+      + +   ++QDVETRW ST+ MV   + L + ++   ++ N N P++++  W  L  +  IL PF      +    Y+TGS VI
Sbjct:  195 MCITTDLWTSRVTESYIAVTGHYITKDLEFKTVLLGCCHFSGNHTATNIADEISALIDNWGLKDKINFAVSDNATNVVKA---IKEGLGWKHFGCFAHTLNLIVNDALV-LVKGLIEKVKTIVAHYKRSTVSSERLSKYQVQQQQTPKHLIQDVETRWNSTFYMVRRFIELQEAVRSTLALVNKNLPVITNDEWSTLSQLCQILRPFEEVTSMMSAQNYLTGSYVI 416          
BLAST of mRNA_H-elongata_contig6179.13737.1 vs. uniprot
Match: A0A6J2XAE3_SITOR (zinc finger BED domain-containing protein DAYSLEEPER-like n=1 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2XAE3_SITOR)

HSP 1 Score: 98.2 bits (243), Expect = 5.950e-20
Identity = 68/230 (29.57%), Postives = 109/230 (47.39%), Query Frame = 0
Query:    7 VAITTDDWTSRKNDSHMSLTMTYIDFKWKLHTLFLDCSKHTGTTTREDLAKGIAAMIERHGLTGRVVACVTDCEPSIIKAGCLVEVGRDLSHIGCFNHRLESTTSSVFNGKSLGALSLARGVVGRYTNSSQMAVRLTA---MCGILEISALCMMQDVETRWWSTWAMVNCLLYLMKVIKHHDSIDNIN-PLLSDTNWKVLRLIDCILEPFMLAKKKLEGAEYVTGSLVIP 232
            V ITTD WTS  NDS+ +LT  YI+  +++ T+ LDCS    + T E+LA+ I  M+    L  ++   ++D   +I      V       H GC+ H+L               L   + +V  +  S+    +L       GI +   L  +QDV TRW ST+ M+  +  L + +KH  ++ N + PLL++  W   R +  +LEP      ++    Y+T S +IP
Sbjct:  134 VCITTDAWTSSVNDSYCALTAHYINEHFEMKTVLLDCSVFKDSHTAENLAEYITKMVSEWNLKDKITIVISDNASNITST---VTNILKWKHYGCYAHKLNLVVQDALRHVK-DVLMKVKAIVTYFKRSNAATRKLVTYQEQIGIKQPKKL--LQDVVTRWNSTYFMLQRITLLEEAVKHSLALSNTDLPLLTEHEWNTCRELCMVLEPCAEVTTEMSSENYITASKIIP 357          
BLAST of mRNA_H-elongata_contig6179.13737.1 vs. uniprot
Match: UPI0008405D89 (zinc finger BED domain-containing protein 1-like n=1 Tax=Ceratina calcarata TaxID=156304 RepID=UPI0008405D89)

HSP 1 Score: 96.7 bits (239), Expect = 2.600e-19
Identity = 71/228 (31.14%), Postives = 114/228 (50.00%), Query Frame = 0
Query:    7 VAITTDDWTSRKNDSHMSLTMTYIDFKWKLHTLFLDCSKHTGTTTREDLAKGIAAMIERHGLTGRVVACVTDCEPSIIKAGCLVEVGRDLSHIGCFNHRLESTTSSVFNGKSLGAL-SLARGVVGRYTNSSQMAVRLTAMCGILEISALCMMQDVETRWWSTWAMVNCLLYLMKVIKHHDSIDNIN-PLLSDTNWKVLRLIDCILEPFMLAKKKLEGAEYVTGSLVIP 232
            + +TTD WTSR  DS +++T  +I+  +KL ++ L C K T   T E++A  +  + E   +  +++  VTD  P+I +   +  +G    HI CF H L        N  ++  L    R +V  +  S+     L         +AL ++QDV TRW ST+ M++  + L + IK    I N N P +S + W++LR I  IL+P   A K +    Y   S++IP
Sbjct:  495 ICVTTDTWTSRHTDSFLAITAHFIN-DFKLESVLLSCRKVTEAHTSENIANILKTVCEEWNILDKIIFAVTDNAPNI-RNSIIHHLG--WYHIACFAHTLNLIVKHSLNTDTINLLIDKIRKIVTYFKESTTAMDILDTYQVTAGANALKLLQDVSTRWDSTYYMIDRFVLLEEPIKATIPIINNNLPCISSSEWEILREIAVILKPIESATKIISDQRYPIVSILIP 718          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6179.13737.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCS5_ECTSI7.960e-11171.98Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5KUY5_9PHAE3.450e-10568.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJV8_9PHAE2.900e-6549.57Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JHP9_9PHAE1.880e-6249.14Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5KVI1_9PHAE3.040e-5448.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7Y8_9PHAE1.120e-3454.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A224XKI7_9HEMI1.440e-2228.21Putative hat-25 zm (Fragment) n=1 Tax=Panstrongylu... [more]
A0A7E5WZM1_TRINI1.100e-2029.65zinc finger BED domain-containing protein 1-like n... [more]
A0A6J2XAE3_SITOR5.950e-2029.57zinc finger BED domain-containing protein DAYSLEEP... [more]
UPI0008405D892.600e-1931.14zinc finger BED domain-containing protein 1-like n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46169FAMILY NOT NAMEDcoord: 6..232
NoneNo IPR availablePANTHERPTHR46169:SF3coord: 6..232
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..232

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6179contigH-elongata_contig6179:5877..6575 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6179.13737.1mRNA_H-elongata_contig6179.13737.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6179 5028..6578 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6179.13737.1 ID=prot_H-elongata_contig6179.13737.1|Name=mRNA_H-elongata_contig6179.13737.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=233bp
MLDGEFVAITTDDWTSRKNDSHMSLTMTYIDFKWKLHTLFLDCSKHTGTT
TREDLAKGIAAMIERHGLTGRVVACVTDCEPSIIKAGCLVEVGRDLSHIG
CFNHRLESTTSSVFNGKSLGALSLARGVVGRYTNSSQMAVRLTAMCGILE
ISALCMMQDVETRWWSTWAMVNCLLYLMKVIKHHDSIDNINPLLSDTNWK
VLRLIDCILEPFMLAKKKLEGAEYVTGSLVIP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf