prot_H-elongata_contig6170.13723.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6170.13723.1
Unique Nameprot_H-elongata_contig6170.13723.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length205
Homology
BLAST of mRNA_H-elongata_contig6170.13723.1 vs. uniprot
Match: D7FVE6_ECTSI (Voltage Gated Calcium/Sodium Channel subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE6_ECTSI)

HSP 1 Score: 349 bits (896), Expect = 7.540e-108
Identity = 174/205 (84.88%), Postives = 182/205 (88.78%), Query Frame = 0
Query:    1 IERANYTFSLIFTLEAIVKILALRQAYFIDPWNRFDIFIVIGTNLGLVLLWENGRSYGSIATIIRTFRIGRVLRLVRGLESMAQLFNTLLLTLPSLGNVGALLFLQFFIYAVMGVQLFATVRQEQNQTYLYLPHEANFQTFWGSMVLLLRFSTGENWNGFMYDMVATREGCQSQPVYDPDMCGFTYHANCTPLNGCGSWSIYPYM 205
            IE ANY+FS IFT+EAI+KILA R+AYFIDPWNRFDIFIVIGTNLGL +LW  GRSYGSIATIIRTFRIGRVLRLVRGLESMAQLFNTLLLTLPSLGNVGALLFLQFFIYAVMGVQLFATV          +  +ANFQTFWGSMVLLLRFSTGENWNGFMYDMVA RE C S PVYDPDMCGFT HANCTPLNGCGSWSI+PYM
Sbjct: 1319 IEGANYSFSFIFTVEAIIKILAFRRAYFIDPWNRFDIFIVIGTNLGLAMLWMTGRSYGSIATIIRTFRIGRVLRLVRGLESMAQLFNTLLLTLPSLGNVGALLFLQFFIYAVMGVQLFATVGLRGA-----VDEQANFQTFWGSMVLLLRFSTGENWNGFMYDMVAEREDCVSNPVYDPDMCGFTSHANCTPLNGCGSWSIFPYM 1518          
BLAST of mRNA_H-elongata_contig6170.13723.1 vs. uniprot
Match: A0A6H5JIB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIB7_9PHAE)

HSP 1 Score: 345 bits (884), Expect = 4.990e-107
Identity = 174/221 (78.73%), Postives = 184/221 (83.26%), Query Frame = 0
Query:    1 IERANYTFSLIFTLEAIVKILALRQAYFIDPWNRFDIFIVIGTNLGLVLLWENGRSYGSIATIIRTFRIGRVLRLVRGLESMAQLFNTLLLTLPSLGNVGALLFLQFFIYAVMGVQLFATVRQEQNQTYLYLPH----------------EANFQTFWGSMVLLLRFSTGENWNGFMYDMVATREGCQSQPVYDPDMCGFTYHANCTPLNGCGSWSIYPYM 205
            IE ANY+FS IFT+EAI+KILA R+AYFIDPWNRFDIFIV+GTNLGL +LW  GRSYGSIATIIRTFRIGRVLRLVRGLESMAQLFNTLLLTLPSLGNVGALLFLQFFIYAVMGVQLFATV +  +       H                +ANFQTFWGSMVLLLRFSTGENWNGFMYDMVA RE C S PVYDPDMCGFT HANCTPLNGCGSWSI+PYM
Sbjct:  821 IEGANYSFSFIFTVEAIIKILAFRRAYFIDPWNRFDIFIVMGTNLGLAMLWMTGRSYGSIATIIRTFRIGRVLRLVRGLESMAQLFNTLLLTLPSLGNVGALLFLQFFIYAVMGVQLFATVSEPGHLFSSLWTHNGYALIMVGLRGAVDEQANFQTFWGSMVLLLRFSTGENWNGFMYDMVAEREDCVSNPVYDPDMCGFTSHANCTPLNGCGSWSIFPYM 1041          
BLAST of mRNA_H-elongata_contig6170.13723.1 vs. uniprot
Match: A0A812VYI9_SYMMI (Scn4ab protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VYI9_SYMMI)

HSP 1 Score: 240 bits (613), Expect = 5.500e-73
Identity = 119/205 (58.05%), Postives = 145/205 (70.73%), Query Frame = 0
Query:    1 IERANYTFSLIFTLEAIVKILALRQAYFIDPWNRFDIFIVIGTNLGLVLLWENGRSYGSIATIIRTFRIGRVLRLVRGLESMAQLFNTLLLTLPSLGNVGALLFLQFFIYAVMGVQLFATVRQEQNQTYLYLPHEANFQTFWGSMVLLLRFSTGENWNGFMYDMVATREGCQSQPVYDPDMCGFTYHANCTPLNGCGSWSIYPYM 205
            +E  N  F++IFTLEA++KI AL+  YF D WNRFD  +V+GTN GL+ LW +G + G   TI+RTFRI R+LRL+ G ES++QLFNTLLLTLP LGN+ ALLFL FFIYAVMGVQLFA V    +         ANF+ F  +M+ LLRFSTGENW+GFMYD+      C + P YD   CGF     CTPLNGCGS++IYPYM
Sbjct:   29 LETMNTMFAMIFTLEAVIKISALKSKYFSDMWNRFDFVVVVGTNAGLIFLWISGSNIGMTVTILRTFRIARLLRLMNGAESISQLFNTLLLTLPGLGNIAALLFLLFFIYAVMGVQLFAKVEYSGDHD-----EHANFRDFGIAMISLLRFSTGENWDGFMYDVGRKSSTCVNDPDYDSAYCGFNDRTGCTPLNGCGSFAIYPYM 228          
BLAST of mRNA_H-elongata_contig6170.13723.1 vs. uniprot
Match: A0A662WJW7_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WJW7_9STRA)

HSP 1 Score: 206 bits (524), Expect = 7.730e-58
Identity = 105/205 (51.22%), Postives = 141/205 (68.78%), Query Frame = 0
Query:    1 IERANYTFSLIFTLEAIVKILALRQAYFIDPWNRFDIFIVIGTNLGLVLLWENGRSYGSIATIIRTFRIGRVLRLVRGLESMAQLFNTLLLTLPSLGNVGALLFLQFFIYAVMGVQLFATVRQEQNQTYLYLPHEANFQTFWGSMVLLLRFSTGENWNGFMYDMVATREGCQSQPVYDPDMCGFTYHANCTPLNGCGSWSIYPYM 205
            +E +NY FS IF LEAIVKI+ LR+ Y+ D WN FD  IV+GT+ G++  +  G + G+ A+ +R+FR+GR+ RL+    S+ QLFNTLL+TLPSL N+G LLFL FFIYA MGVQLFA V+     T       +NFQT  G+MV L+R STGE WN  M+++ A ++ C + P YDP+MCGF+   +C PLNGCGS   + Y+
Sbjct: 1073 LEYSNYFFSTIFALEAIVKIIGLRRNYWKDSWNLFDFVIVLGTSCGMLYHFFGGSTVGTAASAVRSFRVGRLFRLLHSAPSLRQLFNTLLVTLPSLVNIGGLLFLVFFIYAAMGVQLFAKVKLGPLNT-----SSSNFQTIAGAMVTLVRCSTGERWNDLMFEL-ANQDDCVTDPSYDPNMCGFSSDVDCVPLNGCGSPVAFAYL 1271          
BLAST of mRNA_H-elongata_contig6170.13723.1 vs. uniprot
Match: A0A8K1CRX9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CRX9_PYTOL)

HSP 1 Score: 205 bits (522), Expect = 1.460e-57
Identity = 108/205 (52.68%), Postives = 134/205 (65.37%), Query Frame = 0
Query:    1 IERANYTFSLIFTLEAIVKILALRQAYFIDPWNRFDIFIVIGTNLGLVLLWENGRSYGSIATIIRTFRIGRVLRLVRGLESMAQLFNTLLLTLPSLGNVGALLFLQFFIYAVMGVQLFATVRQEQNQTYLYLPHEANFQTFWGSMVLLLRFSTGENWNGFMYDMVATREGCQSQPVYDPDMCGFTYHANCTPLNGCGSWSIYPYM 205
            IE +NY F+LIFT EA +KI  L   Y+ D WNRFD  IV+G+ +GL+  W  G S G++AT  R FR+GR+ RL++   S+ QLFNTLL+TLPSL N+G LLFL FFIYA MGVQLFA V+       L  P   NFQT   +MV L+R +TGE WN  MY++ +T E C   P YDP MCGF    NC  LNGCGS   + Y+
Sbjct: 1203 IEFSNYVFALIFTCEAAIKITGLGHYYWKDAWNRFDFVIVLGSFIGLLYQWAGGSSVGALATSFRGFRVGRLFRLIQSAPSLRQLFNTLLITLPSLVNIGGLLFLVFFIYAAMGVQLFAKVKFRD----LITP-TTNFQTIERAMVTLIRCATGERWNDVMYELAST-EDCVEDPTYDPTMCGFNNSPNCVALNGCGSPVAFIYL 1401          
BLAST of mRNA_H-elongata_contig6170.13723.1 vs. uniprot
Match: A0A662XYJ8_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XYJ8_9STRA)

HSP 1 Score: 204 bits (519), Expect = 3.610e-57
Identity = 106/205 (51.71%), Postives = 139/205 (67.80%), Query Frame = 0
Query:    1 IERANYTFSLIFTLEAIVKILALRQAYFIDPWNRFDIFIVIGTNLGLVLLWENGRSYGSIATIIRTFRIGRVLRLVRGLESMAQLFNTLLLTLPSLGNVGALLFLQFFIYAVMGVQLFATVRQEQNQTYLYLPHEANFQTFWGSMVLLLRFSTGENWNGFMYDMVATREGCQSQPVYDPDMCGFTYHANCTPLNGCGSWSIYPYM 205
            +E +NY FS IF LEAIVKI+ LR+ Y+ D WN FD  IV+GT+ G +  +  G + G+ A+ +R+FR+GR+ RL+    S+ QLFNTLL+TLPSL N+G LLFL FFIYA MGVQLFA V+     T       ANFQT  G+MV L+R STGE WN  M+++ A ++ C + P YDP+MCGF+   +C PLNGCGS   + Y 
Sbjct:  502 LEYSNYFFSTIFALEAIVKIIGLRRNYWKDSWNLFDFVIVLGTSCGNLYHFLGGSTVGTSASAVRSFRVGRLFRLLHSAPSLRQLFNTLLVTLPSLVNIGGLLFLVFFIYAAMGVQLFAKVKLGPLNT-----SSANFQTIAGAMVTLVRCSTGERWNDLMFEL-ANQDDCVTDPSYDPNMCGFSSDVDCVPLNGCGSPVAFAYF 700          
BLAST of mRNA_H-elongata_contig6170.13723.1 vs. uniprot
Match: A0A7S4DBN8_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBN8_HETAK)

HSP 1 Score: 200 bits (509), Expect = 7.710e-56
Identity = 108/207 (52.17%), Postives = 137/207 (66.18%), Query Frame = 0
Query:    1 IERANYTFSLIFTLEAIVKILALRQAYFIDPWNRFDIFIVIGTNLGLVLLWENGRSYGSIATIIRTFRIGRVLRLVRGLESMAQLFNTLLLTLPSLGNVGALLFLQFFIYAVMGVQLFATVRQEQNQTYLYLPHEANFQTFWGSMVLLLRFSTGENWNGFMYDMVATR--EGCQSQPVYDPDMCGFTYHANCTPLNGCGSWSIYPYM 205
            +E  NY F+L+FT+EA++K+ ALR+AYF + WN FD  IV+ TNLGL+  W  G S GSIA+IIRTFRIGRV RLV   E++ QLF TL  TL  L NV ALLFL  FI++V  +QLF+TV    + T        NFQTF  S++ L+ FSTGENWNGFM+  VAT   + C S   Y   MCG+T    C PL+GCG+  + P+M
Sbjct:  709 LEYINYFFALVFTVEAVIKLFALRKAYFKEGWNCFDFSIVLATNLGLLFYWVFGSSIGSIASIIRTFRIGRVTRLVSRAETLNQLFQTLFSTLVGLSNVAALLFLVLFIHSVTAMQLFSTVALHDDLT-----EHMNFQTFGKSLLTLIAFSTGENWNGFMWS-VATDFDDSCSSSVSYSATMCGYTRSPGCEPLDGCGNPYVVPFM 909          
BLAST of mRNA_H-elongata_contig6170.13723.1 vs. uniprot
Match: A0A2D4C6S1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6S1_PYTIN)

HSP 1 Score: 200 bits (509), Expect = 8.170e-56
Identity = 104/205 (50.73%), Postives = 134/205 (65.37%), Query Frame = 0
Query:    1 IERANYTFSLIFTLEAIVKILALRQAYFIDPWNRFDIFIVIGTNLGLVLLWENGRSYGSIATIIRTFRIGRVLRLVRGLESMAQLFNTLLLTLPSLGNVGALLFLQFFIYAVMGVQLFATVRQEQNQTYLYLPHEANFQTFWGSMVLLLRFSTGENWNGFMYDMVATREGCQSQPVYDPDMCGFTYHANCTPLNGCGSWSIYPYM 205
            IE  NY F+L+F LEA +K+  L   Y+ D WN FD  +V+G+ LG++  W  G S G++AT IR+FR+GR+ RLV+   S+ QLFNTLL+TLPSL N+G LLFL FFIYA MGVQLFA V+  +      +   ANFQ+   +MV L+R +TGE WN  MY++ AT+  C   P YDP MCGF     C  LNGCGS   + YM
Sbjct: 1275 IEFTNYFFALVFALEAAIKVYGLGHYYWKDRWNIFDFVLVLGSFLGMLYQWVGGSSVGTVATSIRSFRVGRLFRLVQSAPSLRQLFNTLLITLPSLVNIGGLLFLVFFIYAAMGVQLFAKVKFGE-----LITRTANFQSITRAMVTLVRCATGERWNDMMYEL-ATQSDCTPDPDYDPHMCGFNNTLGCVDLNGCGSPVAFIYM 1473          
BLAST of mRNA_H-elongata_contig6170.13723.1 vs. uniprot
Match: K3WQ22_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQ22_GLOUD)

HSP 1 Score: 194 bits (494), Expect = 4.460e-55
Identity = 105/205 (51.22%), Postives = 135/205 (65.85%), Query Frame = 0
Query:    1 IERANYTFSLIFTLEAIVKILALRQAYFIDPWNRFDIFIVIGTNLGLVLLWENGRSYGSIATIIRTFRIGRVLRLVRGLESMAQLFNTLLLTLPSLGNVGALLFLQFFIYAVMGVQLFATVRQEQNQTYLYLPHEANFQTFWGSMVLLLRFSTGENWNGFMYDMVATREGCQSQPVYDPDMCGFTYHANCTPLNGCGSWSIYPYM 205
            IE +NY F+ IFTLEA+VKI  L + Y+ D WN FD  IV G+ LG++  W  G S G++A  +R+FR  R+ RLV+   S+ QLFNTLL+TLPSL ++G LLFL FFIYA MGVQLFA V+       L  P  ANFQT   +MV L+R +TGE WN  MY++ ++++ C   P Y+P+MCGF   A C  LNGCGS   Y Y 
Sbjct:  425 IEYSNYVFAFIFTLEAVVKIAGLGRYYWKDSWNIFDFLIVSGSLLGMLYTWIGGSSVGTVAGAVRSFRTWRLFRLVQSAPSLRQLFNTLLITLPSLVSIGGLLFLIFFIYAAMGVQLFAKVKFGD----LVTP-TANFQTIARAMVTLVRCATGERWNDLMYEL-SSQDDCVEDPPYNPEMCGFNNTAGCKMLNGCGSPVAYAYF 623          
BLAST of mRNA_H-elongata_contig6170.13723.1 vs. uniprot
Match: G4YKH5_PHYSP (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=G4YKH5_PHYSP)

HSP 1 Score: 193 bits (490), Expect = 2.880e-53
Identity = 100/201 (49.75%), Postives = 134/201 (66.67%), Query Frame = 0
Query:    5 NYTFSLIFTLEAIVKILALRQAYFIDPWNRFDIFIVIGTNLGLVLLWENGRSYGSIATIIRTFRIGRVLRLVRGLESMAQLFNTLLLTLPSLGNVGALLFLQFFIYAVMGVQLFATVRQEQNQTYLYLPHEANFQTFWGSMVLLLRFSTGENWNGFMYDMVATREGCQSQPVYDPDMCGFTYHANCTPLNGCGSWSIYPYM 205
            NY FS +F LEA++KI+ L + Y+ D WN FD  +V+G   G++     G S G+ A+ +R+FR+GR+ RLV    S+ QLFNTLL+TLPSL N+G LLFL FFIYA MGVQLFA V+  +    L  P  ANFQ+   +M+ L+R +TGE WN  MY++ A +E C S P YDP+ CG +  A+C PLNGCGS   + Y+
Sbjct: 1105 NYFFSAVFALEAVLKIIGLGKYYWKDRWNVFDFIVVLGALFGVIYQMFGGSSVGAAASTVRSFRVGRLFRLVHSAPSLRQLFNTLLITLPSLANIGGLLFLVFFIYAAMGVQLFAKVKFGE----LITP-TANFQSLLKAMITLVRCATGERWNDMMYEL-ANQEDCISDPPYDPNSCGISSDADCIPLNGCGSPVAFVYL 1299          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6170.13723.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVE6_ECTSI7.540e-10884.88Voltage Gated Calcium/Sodium Channel subunit alpha... [more]
A0A6H5JIB7_9PHAE4.990e-10778.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A812VYI9_SYMMI5.500e-7358.05Scn4ab protein n=1 Tax=Symbiodinium microadriaticu... [more]
A0A662WJW7_9STRA7.730e-5851.22Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A8K1CRX9_PYTOL1.460e-5752.68Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662XYJ8_9STRA3.610e-5751.71Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A7S4DBN8_HETAK7.710e-5652.17Hypothetical protein (Fragment) n=3 Tax=Heterosigm... [more]
A0A2D4C6S1_PYTIN8.170e-5650.73Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
K3WQ22_GLOUD4.460e-5551.22Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
G4YKH5_PHYSP2.880e-5349.75Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 4..168
e-value: 3.2E-31
score: 108.4
IPR027359Voltage-dependent channel domain superfamilyGENE3D1.20.120.350coord: 1..81
e-value: 1.6E-18
score: 68.8
NoneNo IPR availableGENE3D1.10.287.70coord: 82..187
e-value: 8.9E-18
score: 66.2
NoneNo IPR availablePANTHERPTHR10037VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUMcoord: 4..204
NoneNo IPR availablePANTHERPTHR10037:SF62SODIUM CHANNEL PROTEIN 60Ecoord: 4..204
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 120..205
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..51
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 52..98
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 24..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..119
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 3..164
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 99..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6170contigH-elongata_contig6170:8132..9837 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6170.13723.1mRNA_H-elongata_contig6170.13723.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6170 8132..9837 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6170.13723.1 ID=prot_H-elongata_contig6170.13723.1|Name=mRNA_H-elongata_contig6170.13723.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=205bp
IERANYTFSLIFTLEAIVKILALRQAYFIDPWNRFDIFIVIGTNLGLVLL
WENGRSYGSIATIIRTFRIGRVLRLVRGLESMAQLFNTLLLTLPSLGNVG
ALLFLQFFIYAVMGVQLFATVRQEQNQTYLYLPHEANFQTFWGSMVLLLR
FSTGENWNGFMYDMVATREGCQSQPVYDPDMCGFTYHANCTPLNGCGSWS
IYPYM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005821Ion_trans_dom
IPR027359Volt_channel_dom_sf