prot_H-elongata_contig61585.13709.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig61585.13709.1
Unique Nameprot_H-elongata_contig61585.13709.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length100
Homology
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BLAST of mRNA_H-elongata_contig61585.13709.1 vs. uniprot
Match: A0A6H5KBT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBT0_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 6.110e-20
Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 0 
Query:   38 EWEHLDAFQAMGSMFQQELYHEKMSGFVEVLGDKTKVPLLIILVGVMAALVGMTISYCSSTAR 100
            +WEHLDAFQAMGSMFQQELYHEK SG V+VL D+ +VPLLIILVG++AAL GM +S  S+ AR
Sbjct:  132 DWEHLDAFQAMGSMFQQELYHEKSSGLVDVLVDRMRVPLLIILVGILAALAGMFVSLLSAWAR 194
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BLAST of mRNA_H-elongata_contig61585.13709.1 vs. uniprot
Match: D8LJI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJI9_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 1.680e-10
Identity = 30/37 (81.08%), Postives = 33/37 (89.19%), Query Frame = 0 
Query:   38 EWEHLDAFQAMGSMFQQELYHEKMSGFVEVLGDKTKV 74
            EWEHLDAFQAMGSMFQQELYHEK SG V+VL D+ +V
Sbjct:  132 EWEHLDAFQAMGSMFQQELYHEKSSGLVDVLVDRMRV 168
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61585.13709.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KBT0_9PHAE6.110e-2073.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJI9_ECTSI1.680e-1081.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 96..100
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..95
NoneNo IPR availableTMHMMTMhelixcoord: 74..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig61585contigH-elongata_contig61585:1534..2980 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig61585.13709.1mRNA_H-elongata_contig61585.13709.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig61585 1534..2980 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig61585.13709.1 ID=prot_H-elongata_contig61585.13709.1|Name=mRNA_H-elongata_contig61585.13709.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=100bp
WNEPGVKKYAGEGEAYGGHDRGSEGHGEKKDPPPQPVEWEHLDAFQAMGS
MFQQELYHEKMSGFVEVLGDKTKVPLLIILVGVMAALVGMTISYCSSTAR
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