prot_H-elongata_contig61388.13691.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig61388.13691.1
Unique Nameprot_H-elongata_contig61388.13691.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length102
Homology
BLAST of mRNA_H-elongata_contig61388.13691.1 vs. uniprot
Match: D7G5R8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R8_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 7.060e-45
Identity = 75/97 (77.32%), Postives = 89/97 (91.75%), Query Frame = 0
Query:    1 QLGGLFQKPKLTEKLLSKAPFRFLHDIVLAVSASTGFTAGLFSGDELESGAIKEKAVKIAYLDKLVALVGICSGYDVPVRPSKVVAGLEPEGTNALL 97
            QLGGLFQKP+L+EKLLSKAPFRFLHD++ AV+ASTGF AGL+S +EL+SG++K+K  KI YLDK++ALVGICSG D+ VRPSKVVAGLEPEGTNALL
Sbjct:   12 QLGGLFQKPRLSEKLLSKAPFRFLHDVISAVTASTGFAAGLYSDEELDSGSVKDKGSKIGYLDKIIALVGICSGRDIDVRPSKVVAGLEPEGTNALL 108          
BLAST of mRNA_H-elongata_contig61388.13691.1 vs. uniprot
Match: A0A835YT93_9STRA (Microtubule-binding protein MIP-T3-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT93_9STRA)

HSP 1 Score: 135 bits (339), Expect = 1.020e-34
Identity = 65/97 (67.01%), Postives = 77/97 (79.38%), Query Frame = 0
Query:    1 QLGGLFQKPKLTEKLLSKAPFRFLHDIVLAVSASTGFTAGLFSGDELESGAIKEKAVKIAYLDKLVALVGICSGYDVPVRPSKVVAGLEPEGTNALL 97
            +LG +  KPKLTEKLLSK PFRFLHD++ AV+A+TGF  GL+SGDEL+SG +KEK  K+AYLDK VA VG C G  V +R +KVVAGLEPE TNA L
Sbjct:   15 ELGAVISKPKLTEKLLSKPPFRFLHDVISAVTAATGFGTGLYSGDELDSGLVKEKGPKMAYLDKAVACVGFCQGTAVDIRSAKVVAGLEPENTNAFL 111          
BLAST of mRNA_H-elongata_contig61388.13691.1 vs. uniprot
Match: A0A8J4D5E8_9CHLO (MIP-T3 domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4D5E8_9CHLO)

HSP 1 Score: 116 bits (291), Expect = 1.780e-31
Identity = 56/93 (60.22%), Postives = 69/93 (74.19%), Query Frame = 0
Query:    5 LFQKPKLTEKLLSKAPFRFLHDIVLAVSASTGFTAGLFSGDELESGAIKEKAVKIAYLDKLVALVGICSGYDVPVRPSKVVAGLEPEGTNALL 97
            +F KPKL+EKLL K PFRFLHD+V AV +STGF  GLF GDEL+  AI+EK  K+AYL K++ +V +  G   P RP+K+VAGLEPE TN  L
Sbjct:   18 VFDKPKLSEKLLVKPPFRFLHDVVSAVQSSTGFAPGLFQGDELDGKAIQEKDAKVAYLRKIIDVVSMTLGEQCPARPNKIVAGLEPENTNVFL 110          
BLAST of mRNA_H-elongata_contig61388.13691.1 vs. uniprot
Match: A0A7S3WCQ6_EMIHU (Hypothetical protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WCQ6_EMIHU)

HSP 1 Score: 118 bits (295), Expect = 8.270e-31
Identity = 61/96 (63.54%), Postives = 71/96 (73.96%), Query Frame = 0
Query:    2 LGGLFQKPKLTEKLLSKAPFRFLHDIVLAVSASTGFTAGLFSGDELESGAIKEKAVKIAYLDKLVALVGICSGYDVPVRPSKVVAGLEPEGTNALL 97
            LG L ++PKLT  LLSK PFRFLHDIV  V+ +TGF  GLFS DEL+SG IKEK +KIAYL K+   V + SG  + VRP KVVAG+EPE TNA L
Sbjct:   27 LGPLIKRPKLTAALLSKPPFRFLHDIVSEVTRATGFADGLFSEDELQSGRIKEKELKIAYLSKIFKCVEVASGGALGVRPGKVVAGMEPENTNAFL 122          
BLAST of mRNA_H-elongata_contig61388.13691.1 vs. uniprot
Match: A0A7S3YFX9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YFX9_HETAK)

HSP 1 Score: 114 bits (285), Expect = 8.880e-31
Identity = 56/102 (54.90%), Postives = 70/102 (68.63%), Query Frame = 0
Query:    1 QLGGLFQKPKLTEKLLSKAPFRFLHDIVLAVSASTGFTAGLFSGDELESGAIKEKAVKIAYLDKLVALVGICSGYDVPVRPSKVVAGLEPEGTNALLAVSNE 102
            +LGG+F KPKL+EKLLSK PFRF+HD +   +A TGF  GLF G EL+   +K+K  KIAYL+K +  +    G  + VR SK+VAGLEPE TN LLA   E
Sbjct:    1 KLGGIFPKPKLSEKLLSKPPFRFIHDCISNTTAETGFLEGLFEGAELDGKGMKDKGDKIAYLEKAITAICHAKGESIDVRASKIVAGLEPENTNLLLAALGE 102          
BLAST of mRNA_H-elongata_contig61388.13691.1 vs. uniprot
Match: R1FU15_EMIHU (MIP-T3 domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FU15_EMIHU)

HSP 1 Score: 118 bits (295), Expect = 2.650e-30
Identity = 61/96 (63.54%), Postives = 71/96 (73.96%), Query Frame = 0
Query:    2 LGGLFQKPKLTEKLLSKAPFRFLHDIVLAVSASTGFTAGLFSGDELESGAIKEKAVKIAYLDKLVALVGICSGYDVPVRPSKVVAGLEPEGTNALL 97
            LG L ++PKLT  LLSK PFRFLHDIV  V+ +TGF  GLFS DEL+SG IKEK +KIAYL K+   V + SG  + VRP KVVAG+EPE TNA L
Sbjct:   14 LGPLIKRPKLTAALLSKPPFRFLHDIVSEVTRATGFADGLFSEDELQSGRIKEKELKIAYLSKIFKCVEVASGGALGVRPGKVVAGMEPENTNAFL 109          
BLAST of mRNA_H-elongata_contig61388.13691.1 vs. uniprot
Match: A0A8J4AKX1_9CHLO (Uncharacterized protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4AKX1_9CHLO)

HSP 1 Score: 118 bits (296), Expect = 3.960e-29
Identity = 58/93 (62.37%), Postives = 69/93 (74.19%), Query Frame = 0
Query:    5 LFQKPKLTEKLLSKAPFRFLHDIVLAVSASTGFTAGLFSGDELESGAIKEKAVKIAYLDKLVALVGICSGYDVPVRPSKVVAGLEPEGTNALL 97
            +F KPKL+EKLL K PFRFLHD+V AV ASTGF  GLF GDEL+  AI+EK  K+AYL K++ +V I  G   P RP+K+VAGLEPE TN  L
Sbjct:   18 VFDKPKLSEKLLVKPPFRFLHDVVSAVQASTGFAPGLFQGDELDGKAIQEKDAKVAYLRKIIDVVSITLGEQCPARPNKIVAGLEPENTNIFL 110          
BLAST of mRNA_H-elongata_contig61388.13691.1 vs. uniprot
Match: A0A7S4NCB2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4NCB2_9EUKA)

HSP 1 Score: 110 bits (276), Expect = 9.190e-29
Identity = 53/96 (55.21%), Postives = 69/96 (71.88%), Query Frame = 0
Query:    2 LGGLFQKPKLTEKLLSKAPFRFLHDIVLAVSASTGFTAGLFSGDELESGAIKEKAVKIAYLDKLVALVGICSGYDVPVRPSKVVAGLEPEGTNALL 97
            LG L ++PKL++ LL K PFRFLHDIV  V+ +TGF  GL+ GDEL+SG+IK+K  K+AYL K++  V I     + +R  KVVAG+EPE TNA L
Sbjct:   36 LGTLIKRPKLSDALLLKPPFRFLHDIVSEVTKATGFATGLYEGDELKSGSIKDKDTKVAYLSKIIKCVEIALNSQIAIRAGKVVAGMEPENTNAFL 131          
BLAST of mRNA_H-elongata_contig61388.13691.1 vs. uniprot
Match: A0A7S3WJE7_9SPIT (Hypothetical protein n=3 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3WJE7_9SPIT)

HSP 1 Score: 115 bits (287), Expect = 4.680e-28
Identity = 56/96 (58.33%), Postives = 70/96 (72.92%), Query Frame = 0
Query:    2 LGGLFQKPKLTEKLLSKAPFRFLHDIVLAVSASTGFTAGLFSGDELESGAIKEKAVKIAYLDKLVALVGICSGYDVPVRPSKVVAGLEPEGTNALL 97
            LG + ++PKLT  LL K PFRFLHDIV  V+ +TGF  GLF  +EL+SG IKEK +KIAYL K++  V I +G  + +RP KVVAG+EPE TNA L
Sbjct:   49 LGAIIKRPKLTAALLGKPPFRFLHDIVSEVTRATGFAEGLFGEEELQSGKIKEKELKIAYLAKIIKSVEIATGKTITIRPGKVVAGMEPENTNAFL 144          
BLAST of mRNA_H-elongata_contig61388.13691.1 vs. uniprot
Match: A0A7J7QCI1_9CHLO (Microtubule-binding protein MIP-T3-domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QCI1_9CHLO)

HSP 1 Score: 115 bits (287), Expect = 6.780e-28
Identity = 56/96 (58.33%), Postives = 70/96 (72.92%), Query Frame = 0
Query:    2 LGGLFQKPKLTEKLLSKAPFRFLHDIVLAVSASTGFTAGLFSGDELESGAIKEKAVKIAYLDKLVALVGICSGYDVPVRPSKVVAGLEPEGTNALL 97
            +  L  KPKLT+KLLSK PFRFLHD++ AV A TGF  GLFSG EL++ AI++K  K+AYL K+ A+V +  G  VP +P K+VAGLEPE TN  L
Sbjct:   18 IDPLVDKPKLTDKLLSKPPFRFLHDVISAVQAKTGFAPGLFSGAELDAHAIQDKEGKVAYLTKITAVVSMALGEPVPAKPLKIVAGLEPENTNLFL 113          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61388.13691.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5R8_ECTSI7.060e-4577.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YT93_9STRA1.020e-3467.01Microtubule-binding protein MIP-T3-domain-containi... [more]
A0A8J4D5E8_9CHLO1.780e-3160.22MIP-T3 domain-containing protein n=1 Tax=Volvox re... [more]
A0A7S3WCQ6_EMIHU8.270e-3163.54Hypothetical protein (Fragment) n=2 Tax=Emiliania ... [more]
A0A7S3YFX9_HETAK8.880e-3154.90Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
R1FU15_EMIHU2.650e-3063.54MIP-T3 domain-containing protein n=1 Tax=Emiliania... [more]
A0A8J4AKX1_9CHLO3.960e-2962.37Uncharacterized protein n=2 Tax=Volvox TaxID=3066 ... [more]
A0A7S4NCB2_9EUKA9.190e-2955.21Hypothetical protein (Fragment) n=1 Tax=Prymnesium... [more]
A0A7S3WJE7_9SPIT4.680e-2858.33Hypothetical protein n=3 Tax=Choreotrichia TaxID=1... [more]
A0A7J7QCI1_9CHLO6.780e-2858.33Microtubule-binding protein MIP-T3-domain-containi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040468TRAF3-interacting protein 1, N-terminalPFAMPF10243MIP-T3coord: 2..98
e-value: 8.3E-34
score: 116.0
IPR042576TRAF3-interacting protein 1, N-terminal domain superfamilyGENE3D1.10.418.50coord: 1..100
e-value: 4.7E-38
score: 131.7
IPR018799TRAF3-interacting protein 1PANTHERPTHR31363FAMILY NOT NAMEDcoord: 1..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig61388contigH-elongata_contig61388:2246..3057 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig61388.13691.1mRNA_H-elongata_contig61388.13691.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig61388 2246..3057 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig61388.13691.1 ID=prot_H-elongata_contig61388.13691.1|Name=mRNA_H-elongata_contig61388.13691.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp
QLGGLFQKPKLTEKLLSKAPFRFLHDIVLAVSASTGFTAGLFSGDELESG
AIKEKAVKIAYLDKLVALVGICSGYDVPVRPSKVVAGLEPEGTNALLAVS
NE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040468TRAF3IP1_N
IPR042576TRAF3IP1_N_sf
IPR018799TRAF3IP1