prot_H-elongata_contig61317.13682.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig61317.13682.1
Unique Nameprot_H-elongata_contig61317.13682.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length259
Homology
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BLAST of mRNA_H-elongata_contig61317.13682.1 vs. uniprot
Match: D7G522_ECTSI (MYND-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G522_ECTSI)

HSP 1 Score: 319 bits (818), Expect = 2.390e-104
Identity = 167/243 (68.72%), Postives = 196/243 (80.66%), Query Frame = 0 
Query:   11 ADLERAAKSINTVAEEQGMLATLREEVGEACRCLNSFGEGVQQANKNFQEDEQELEGLSYAESLVVPLMKIPVRKLNALGQDSRLHVEIRRLCPPNDKPPYICIIIAPSSRYIFHSFPLEETKAAEAFEHVLEGIVMAVVTEGMGMIDEISRIRPAQLTTTDPLLVNFLSPLLQGTRVSVAASSNKVVNADSDAKTKESPLIAIMDGVFADFNKEIKKANSKRKLPIGDTMAEEAKWKVTNYT 253
            ADL++A + +N VA E GML  L + VG  C+CL  F  G        +  E+E EGL+YAESL  P +KIPV+K NA GQDSRLHVEIRRL  P+DK PY+CI+IAP+SRY+FHSFP+EET+A +AF HVLEGIVM VVTEGMGMI+E  RIRPAQLTTTDPLL NFLSPLL+GTRVSVAASS+KVVNADSDAKTKESPLIAIMDGV+ADF  ++ KANSKRKLPIGD M++EA +KV + T
Sbjct:   95 ADLDKATEEVNAVATEAGMLEALTKAVGSNCKCLTLFTPG-----NPLKPQEEEPEGLTYAESLAAPFLKIPVKKTNATGQDSRLHVEIRRLPAPHDKAPYLCILIAPASRYVFHSFPIEETQADKAFMHVLEGIVMGVVTEGMGMIEEAVRIRPAQLTTTDPLLANFLSPLLEGTRVSVAASSDKVVNADSDAKTKESPLIAIMDGVYADFFIDLTKANSKRKLPIGDNMSDEAAFKVKSRT 332
[Close]
BLAST of mRNA_H-elongata_contig61317.13682.1 vs. uniprot
Match: A0A6H5KRE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRE4_9PHAE)

HSP 1 Score: 288 bits (736), Expect = 2.080e-95
Identity = 150/214 (70.09%), Postives = 173/214 (80.84%), Query Frame = 0 
Query:    9 LQADLERAAKSINTVAEEQGMLATLREEVGEACRCLNSFGEGVQQANKNFQEDEQELEGLSYAESLVVPLMKIPVRKLNALGQDSRLHVEIRRLCPPNDKPPYICIIIAPSSRYIFHSFPLEETKAAEAFEHVLEGIVMAVVTEGMGMIDEISRIRPAQLTTTDPLLVNFLSPLLQGTRVSVAASSNKVVNADSDAKTKESPLIAIMDGVFADF 222
            L ADL++AA+ +N VA E GML  L + VG  C CL  F  G        +  E+E EGL+YAESL  P +KIPV+K NA+GQDSRLHVEIRRL  P+DK PY+CI+IAP+SRY+FHSFP+EET+A +AF HVLEGIVM VVTEGMGMI+E  RIRPAQLTTTDPLL  FLSPLL+GTRVSVAASS+KVVNADSDAKTKESPLIAIMDGV+ADF
Sbjct:    4 LVADLDKAAEEVNAVATEAGMLEALTKAVGSKCNCLTLFTPG-----NPLKPQEEEPEGLTYAESLAAPFLKIPVKKTNAVGQDSRLHVEIRRLPAPHDKAPYLCILIAPASRYVFHSFPIEETQADKAFMHVLEGIVMGVVTEGMGMIEEAVRIRPAQLTTTDPLLAKFLSPLLEGTRVSVAASSDKVVNADSDAKTKESPLIAIMDGVYADF 212
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61317.13682.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G522_ECTSI2.390e-10468.72MYND-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KRE4_9PHAE2.080e-9570.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 51..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig61317contigH-elongata_contig61317:264..3230 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig61317.13682.1mRNA_H-elongata_contig61317.13682.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig61317 264..3230 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig61317.13682.1 ID=prot_H-elongata_contig61317.13682.1|Name=mRNA_H-elongata_contig61317.13682.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=259bp
MRSDAASPLQADLERAAKSINTVAEEQGMLATLREEVGEACRCLNSFGEG
VQQANKNFQEDEQELEGLSYAESLVVPLMKIPVRKLNALGQDSRLHVEIR
RLCPPNDKPPYICIIIAPSSRYIFHSFPLEETKAAEAFEHVLEGIVMAVV
TEGMGMIDEISRIRPAQLTTTDPLLVNFLSPLLQGTRVSVAASSNKVVNA
DSDAKTKESPLIAIMDGVFADFNKEIKKANSKRKLPIGDTMAEEAKWKVT
NYTRVRYL*
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