prot_H-elongata_contig61306.13681.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig61306.13681.1 vs. uniprot
Match: A0A6H5JTK0_9PHAE (Replication protein A subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK0_9PHAE) HSP 1 Score: 300 bits (767), Expect = 1.990e-93 Identity = 141/217 (64.98%), Postives = 169/217 (77.88%), Query Frame = 0
Query: 92 SNSAPVQRQQQEDACMPIASLNPYHNRWVIKARITQKSAIRKWSNTRGEGTLFSIDLLDTDGSEIKGTFFKTEADRWYEHLQEGLVYRISGGKIKVANKKFSSLKSEYEITFDQGTSIERVEDDSRIMSMTYNFVKLNAMEATEPNVMMDVIGIVKSFEDCKRFQLLSGKETEKRNLTLVDDTCTEITMTLWGSLAKEDDWRWDKNPVVAFKGVKAS 308
SNS PVQRQ Q+ A MPI+++NPY NRW IKARIT+K +R+W+N RG GTLFS+DLLD DGSEIKGTFFK +AD+W++ LQEG VY +GGK+KVANKKFSS +EYE+ FD T I + DDSRI S TY FVKLN MEA E N ++DVI +VKS ED +F +GK+ +KRNL LVDDTCTEI +TLWG +AK D RW+ NPVVAFKGVK S
Sbjct: 211 SNSGPVQRQSQDSAYMPISAINPYQNRWTIKARITKKGDMRQWNNARGSGTLFSVDLLDEDGSEIKGTFFKQDADKWFQILQEGQVYAFTGGKVKVANKKFSSFNAEYELNFDSSTQINPINDDSRISSATYAFVKLNEMEAMEANKVLDVIAVVKSVEDHAQFVSRAGKQLDKRNLILVDDTCTEINLTLWGDMAKADGSRWEGNPVVAFKGVKLS 427
BLAST of mRNA_H-elongata_contig61306.13681.1 vs. uniprot
Match: D7FUU1_ECTSI (Replication protein A subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUU1_ECTSI) HSP 1 Score: 245 bits (626), Expect = 3.670e-75 Identity = 116/178 (65.17%), Postives = 139/178 (78.09%), Query Frame = 0
Query: 131 IRKWSNTRGEGTLFSIDLLDTDGSEIKGTFFKTEADRWYEHLQEGLVYRISGGKIKVANKKFSSLKSEYEITFDQGTSIERVEDDSRIMSMTYNFVKLNAMEATEPNVMMDVIGIVKSFEDCKRFQLLSGKETEKRNLTLVDDTCTEITMTLWGSLAKEDDWRWDKNPVVAFKGVKAS 308
+R+W+N RG GTLFS+DLLD DGSEIKGTFFK +AD+W++ LQEG VY +GGK+KVANKKFSS +EYE+TFD T I + DDSRI S TY FVKLN MEA E N ++DVI +VKS ED +F +GK+ +KRNL LVDDTCTEI +TLWG +AK D RW+ NPVVAFKGVK S
Sbjct: 1 MRQWNNARGSGTLFSVDLLDEDGSEIKGTFFKQDADKWFQILQEGQVYAFTGGKVKVANKKFSSFNAEYELTFDSSTQINPINDDSRIGSATYAFVKLNEMEALEANKVLDVIAVVKSVEDHAQFVSRAGKQLDKRNLILVDDTCTEINLTLWGDMAKADGSRWEGNPVVAFKGVKLS 178
BLAST of mRNA_H-elongata_contig61306.13681.1 vs. uniprot
Match: A0A6U0TYW6_9STRA (Replication protein A subunit n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0TYW6_9STRA) HSP 1 Score: 231 bits (590), Expect = 1.660e-67 Identity = 114/218 (52.29%), Postives = 151/218 (69.27%), Query Frame = 0
Query: 93 NSAPVQRQQQEDACMPIASLNPYHNRWVIKARITQKSAIRKWSNTRGEGTLFSIDLLDTDGSEIKGTFFKTEADRWYEHLQEGLVYRISGGKIKVANKKFSSLKSEYEITFDQGTSIERVEDDSRIMSMTYNFVKLNAMEATEPNVMMDVIGIVKSFEDCKRF--QLLSGKETEKRNLTLVDDTCTEITMTLWGSLAKEDDWRWDKNPVVAFKGVKAS 308
NSAPV R + +D MPIA+LN Y+++W IKAR+T KSAIR+WSN RGEG LF++DLLD G EI+ TFFK DR+ LQEG VY SGG++K+A K+++S+K++YEITFD+ I +D+ I + YNF K+ +E P +D++ +VKS +C Q LS KE KR+L LVDD+ TEI MTLWG A+ED +W NPV+A KGVK S
Sbjct: 194 NSAPVARVESDDRIMPIAALNLYNSKWTIKARVTSKSAIRRWSNARGEGHLFNVDLLDGQGGEIRATFFKDACDRFEPLLQEGRVYTFSGGRLKLAKKEYTSIKNDYEITFDRNADIRPSDDEGGIKRIKYNFTKIGDIEKVAPGATIDLVAVVKSCGECNSIMSQKLS-KELFKRDLVLVDDSNTEIQMTLWGDRAREDGGQWMSNPVIAVKGVKVS 410
BLAST of mRNA_H-elongata_contig61306.13681.1 vs. uniprot
Match: W7T7F5_9STRA (Replication protein A subunit n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T7F5_9STRA) HSP 1 Score: 224 bits (570), Expect = 2.370e-64 Identity = 106/216 (49.07%), Postives = 144/216 (66.67%), Query Frame = 0
Query: 94 SAPVQRQQQEDACMPIASLNPYHNRWVIKARITQKSAIRKWSNTRGEGTLFSIDLLDTDGSEIKGTFFKTEADRWYEHLQEGLVYRISGGKIKVANKKFSSLKSEYEITFDQGTSIERVEDDSRIMSMTYNFVKLNAMEATEPNVMMDVIGIVKSFEDCKRFQLLS-GKETEKRNLTLVDDTCTEITMTLWGSLAKEDDWRWDKNPVVAFKGVKAS 308
S PV R + +PI LNPY NRWVIKAR+T K+ I++WSN +GEGTLFS+DLLD EI+ TFFK +++Y L++G VY SGGK+K A +++SS+++ YE TFD + I V DD +I S Y+F K+ +E T PN +DVIG+VK+F G+E EKR LTL DDT TE+ +T+WG A + +W+ +P+VAFKGVK S
Sbjct: 231 SGPVVRAGPPQSIIPINDLNPYINRWVIKARVTSKTDIKRWSNAKGEGTLFSVDLLDEFDGEIRATFFKEACEKFYPLLEQGHVYTFSGGKLKPAQRQYSSIRNNYETTFDTNSEIMEVMDDHKIQSAVYSFKKIGELEETPPNATIDVIGVVKAFSPLSTITTKKDGREVEKRELTLCDDTGTEVRLTVWGERASKQPEQWENHPIVAFKGVKVS 446
BLAST of mRNA_H-elongata_contig61306.13681.1 vs. uniprot
Match: A0A4D9CR27_9STRA (Replication protein A subunit n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CR27_9STRA) HSP 1 Score: 224 bits (570), Expect = 6.130e-63 Identity = 106/216 (49.07%), Postives = 144/216 (66.67%), Query Frame = 0
Query: 94 SAPVQRQQQEDACMPIASLNPYHNRWVIKARITQKSAIRKWSNTRGEGTLFSIDLLDTDGSEIKGTFFKTEADRWYEHLQEGLVYRISGGKIKVANKKFSSLKSEYEITFDQGTSIERVEDDSRIMSMTYNFVKLNAMEATEPNVMMDVIGIVKSFEDCKRFQLLS-GKETEKRNLTLVDDTCTEITMTLWGSLAKEDDWRWDKNPVVAFKGVKAS 308
S PV R + +PI LNPY NRWVIKAR+T K+ I++WSN +GEGTLFS+DLLD EI+ TFFK +++Y L++G VY SGGK+K A +++SS+++ YE TFD + I V DD +I S Y+F K+ +E T PN +DVIG+VK+F G+E EKR LTL DDT TE+ +T+WG A + +W+ +P+VAFKGVK S
Sbjct: 159 SGPVVRAGPPQSIIPINDLNPYINRWVIKARVTSKTDIKRWSNAKGEGTLFSVDLLDEFDGEIRATFFKEACEKFYPLLEQGHVYTFSGGKLKPAQRQYSSIRNNYETTFDTNSEIMEVMDDHKIQSAVYSFKKIGELEETPPNATIDVIGVVKAFSPLSTITTKKDGREVEKRELTLCDDTGTEVRLTVWGERASKQPEQWENHPIVAFKGVKVS 374
BLAST of mRNA_H-elongata_contig61306.13681.1 vs. uniprot
Match: A0A7S2V6G1_9STRA (Replication protein A subunit n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6G1_9STRA) HSP 1 Score: 205 bits (521), Expect = 3.070e-59 Identity = 96/204 (47.06%), Postives = 141/204 (69.12%), Query Frame = 0
Query: 108 PIASLNPYHNRWVIKARITQKSAIRKWSNTRGEGTLFSIDLLDTDGSEIKGTFFKTEADRWYEHLQEGLVYRISGGKIKVANKKFSSLKSEYEITFDQGTSIERVEDDSRIMSMTYNFVKLNAMEATEPNVMMDVIGIVKSFEDCKRF--QLLSGKETEKRNLTLVDDTCTEITMTLWGSLAKEDDWRWDKNP-VVAFKGVKAS 308
PI+SLNPY NRWVIKAR+T K+ I+ WSN RGEG L SI+LLD G+EI+GTFFK + D WY +++G VY ISGG+IK+ANK++S++K++YEITFD T I++++DDS I + + VK+ + + P +D++ +VK+ + Q G++ +KR+L LVDD+ E+ +T+W +AK D W NP +V K V+ S
Sbjct: 5 PISSLNPYQNRWVIKARVTNKTPIKTWSNVRGEGKLASIELLDDQGTEIRGTFFKQQVDDWYNRIEQGKVYSISGGRIKIANKQYSNVKNDYEITFDNSTDIQQLDDDSSIEGLKLSIVKIQELSSLAPGANVDILAVVKNVGEMAEIVSQKQGGRQLQKRDLILVDDSGAEVKLTVWNEMAK-DGSMWVGNPTLVGAKNVRVS 207
BLAST of mRNA_H-elongata_contig61306.13681.1 vs. uniprot
Match: A0A835Z8X4_9STRA (Replication protein A subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8X4_9STRA) HSP 1 Score: 209 bits (531), Expect = 6.390e-59 Identity = 101/212 (47.64%), Postives = 139/212 (65.57%), Query Frame = 0
Query: 90 TGSNSAPVQRQQQEDACMPIASLNPYHNRWVIKARITQKSAIRKWSNTRGEGTLFSIDLLDTDGSEIKGTFFKTEADRWYEHLQEGLVYRISGGKIKVANKKFSSLKSEYEITFDQGTSIERVEDDSRIMSMTYNFVKLNAMEATEPNVMMDVIGIVKSFEDCKRFQLLSGKETEKRNLTLVDDTCTEITMTLWGSLAKEDDWRWDKNPVVA 301
+G S PVQR + PI+ LNPY NRW IKAR+T KS IR+WSN RGEG L S+DLLD G E++GTFFK D++ L+ VY SGG+IKVANK++SSL+++YEITF+ + IE+V DD RI +M F ++ ++ E N +D++ +V+ F+D + +E EKRN+TLVDD+ E+ TLWG+ AK D +PV A
Sbjct: 189 SGGASGPVQRHDSGASYTPISDLNPYMNRWTIKARVTAKSEIRRWSNQRGEGYLASVDLLDEFGGEVRGTFFKDAVDKYLPMLEVNSVYTFSGGRIKVANKQYSSLQNDYEITFNSDSVIEKVADDKRIKAMNLTFRRIADLKDVEVNATIDILAVVRDFQDMAMIMTKNNREVEKRNITLVDDSGAEVVCTLWGAHAKLPDDALRGSPVAA 400
BLAST of mRNA_H-elongata_contig61306.13681.1 vs. uniprot
Match: A0A812QY53_SYMMI (RPA1C protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812QY53_SYMMI) HSP 1 Score: 195 bits (495), Expect = 2.420e-58 Identity = 90/192 (46.88%), Postives = 130/192 (67.71%), Query Frame = 0
Query: 119 WVIKARITQKSAIRKWSNTRGEGTLFSIDLLDTDGSEIKGTFFKTEADRWYEHLQEGLVYRISGGKIKVANKKFSSLKSEYEITFDQGTSIERVEDDSRIMSMTYNFVKLNAMEATEPNVMMDVIGIVKSFEDCKRF--QLLSGKETEKRNLTLVDDTCTEITMTLWGSLAKEDDWRWDKNPVVAFKGVKAS 308
W IKAR+T KS IR+WSN RGEGTLFSIDLLD+ G EI+ TFFK ++W+ L+E VY SGG++KV ++K+S++++EYE+TFD + I+ DD+ I +M YNF+K++ + E N +D++ IV+S +C Q + GK KR L L DD+ ++ +TLWG A+ D W+ P+VAFKG+ S
Sbjct: 1 WKIKARVTSKSDIRRWSNARGEGTLFSIDLLDSAGGEIRATFFKDACEKWFPQLEEQKVYTFSGGRLKVGDRKYSTMRNEYELTFDANSEIQHCADDNDIKTMNYNFMKISDLPQVEANATVDLLAIVRSAGECSELISQKMGGKTLHKRELVLYDDSGFDVRLTLWGDRAQADT-PWNDGPIVAFKGLGVS 191
BLAST of mRNA_H-elongata_contig61306.13681.1 vs. uniprot
Match: A0A7S3XQ94_HETAK (Replication protein A subunit n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ94_HETAK) HSP 1 Score: 204 bits (519), Expect = 3.110e-57 Identity = 103/219 (47.03%), Postives = 148/219 (67.58%), Query Frame = 0
Query: 92 SNSAPVQRQQQEDACMPIASLNPYHNRWVIKARITQKSAIRKWSNTRGEGTLFSIDLLDTDGSEIKGTFFKTEADRWYEHLQEGLVYRISGGKIKVANKKFSSLKSEYEITFDQGTSIERVEDDSRIMSMTYNFVKLNAMEATEPNVMMDVIGIVKSFEDCKRF--QLLSGKETEKRNLTLVDDTCTEITMTLWGSLAKEDDWRWDKNPVVAFKGVKAS 308
+++ PV R+ PIASLNPY NRW IKAR+T++S IR+WSN RGEG L S+DLLD +G+EI+ T FK + DR YE LQEG V+ SGG++KVANK+++S+K++YEITF T +E D++ I ++FV + A+ M+D+I +VKS + + GKE +KR+LTLVD + E+ +T+WG A +W+ +PVVAFKG++AS
Sbjct: 189 TSTGPVARENPNAQYQPIASLNPYQNRWTIKARVTKRSDIRRWSNARGEGHLASVDLLDAEGTEIRATMFKEDCDRLYERLQEGKVFSFSGGRLKVANKQYTSIKNDYEITFGSETVVEGPLDEAGIEQNKFSFVDIAALSPDAG--MVDLIAVVKSAGELSTIISKKQGGKELQKRDLTLVDRSGAEVRLTVWGESALAQA-QWEHSPVVAFKGLRAS 404
BLAST of mRNA_H-elongata_contig61306.13681.1 vs. uniprot
Match: A0A7S2D1P3_9STRA (Replication protein A subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D1P3_9STRA) HSP 1 Score: 202 bits (515), Expect = 4.880e-57 Identity = 106/220 (48.18%), Postives = 139/220 (63.18%), Query Frame = 0
Query: 90 TGSNSAPVQRQQQEDACMPIASLNPYHNRWVIKARITQKSAIRKWSNTRGEGTLFSIDLLDTDGSEIKGTFFKTEADRWYEHLQEGLVYRISGGKIKVANKKFSSLKSEYEITFDQGTSIERVEDDSRIMSMTYNFVKLNAMEA-TEPNVMMDVIGIVKSFEDCKRFQLLSGKETEKRNLTLVDDTCTEITMTLWGSLAKEDDWRWDKNPVVAFKGVKAS 308
T S S P+ R C PIA LNPY NRW IKA + K ++WSN RG G LF IDL D DGSEI FFK ++Y+ L+ G +Y S GKIK+ANKKF + +YEI FD + I V+D SRI M+YNF KL+++E NV +DV+ +VKS+ +C G+ET+KR+L LVDDT E+++TLWGS A + W+ PVVAFK ++ S
Sbjct: 128 TPSASGPIVRASPGVKCTPIAGLNPYQNRWTIKAAVMSKGEKKEWSNDRGSGCLFKIDLQDDDGSEISAAFFKDAVTKFYDMLEVGNIYTFSRGKIKMANKKFRNNNCDYEINFDTMSEICLVDDGSRIQ-MSYNFTKLDSLEQYAGTNVPVDVLAVVKSYTECLSLTTKKGRETQKRDLKLVDDTNLEVSVTLWGSHADNAEL-WEGCPVVAFKKLRVS 345 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61306.13681.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig61306.13681.1 ID=prot_H-elongata_contig61306.13681.1|Name=mRNA_H-elongata_contig61306.13681.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=312bpback to top |