prot_H-elongata_contig6126.13673.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6126.13673.1
Unique Nameprot_H-elongata_contig6126.13673.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length114
Homology
BLAST of mRNA_H-elongata_contig6126.13673.1 vs. uniprot
Match: D7FP20_ECTSI (Glutamate--cysteine ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP20_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 3.490e-15
Identity = 32/39 (82.05%), Postives = 36/39 (92.31%), Query Frame = 0
Query:    3 SNWQTVRWKPPPPRINPNDPHIGWRTEFRSLEIQLVRVE 41
            +NWQTVRWKPPPPR++PNDPH+GWRTEFRSLEIQL   E
Sbjct:  453 TNWQTVRWKPPPPRLSPNDPHVGWRTEFRSLEIQLTDFE 491          
BLAST of mRNA_H-elongata_contig6126.13673.1 vs. uniprot
Match: A0A7S2KFJ0_9STRA (Glutamate--cysteine ligase (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KFJ0_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 5.520e-15
Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 0
Query:    3 SNWQTVRWKPPPPRINPNDPHIGWRTEFRSLEIQLVRVE 41
            +NWQ+VRWKPPPPR  PNDPHIGWRTEFRS+E+QL   E
Sbjct:   43 TNWQSVRWKPPPPRHTPNDPHIGWRTEFRSMEMQLTDFE 81          
BLAST of mRNA_H-elongata_contig6126.13673.1 vs. uniprot
Match: A0A7S2WRG5_9STRA (Glutamate--cysteine ligase (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WRG5_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 7.170e-15
Identity = 35/51 (68.63%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    3 SNWQTVRWKPPPPRINPNDPHIGWRTEFRSLEIQLVRVERCQTHLGTSELT 53
            +NWQTVRWKPPPPR +PNDPHIGWRTEFRS+EIQL   E     + T  LT
Sbjct:  222 TNWQTVRWKPPPPRNSPNDPHIGWRTEFRSMEIQLTDFENAAFTIFTVLLT 272          
BLAST of mRNA_H-elongata_contig6126.13673.1 vs. uniprot
Match: B8LE49_THAPS (Glutamate--cysteine ligase (Fragment) n=2 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LE49_THAPS)

HSP 1 Score: 79.0 bits (193), Expect = 8.770e-15
Identity = 35/51 (68.63%), Postives = 38/51 (74.51%), Query Frame = 0
Query:    3 SNWQTVRWKPPPPRINPNDPHIGWRTEFRSLEIQLVRVERCQTHLGTSELT 53
            +NWQTVRWKPPPPR  PNDPHIGWRTEFRS+EIQL   E       T+ LT
Sbjct:  422 TNWQTVRWKPPPPRSGPNDPHIGWRTEFRSMEIQLTDFENAAFTTFTTLLT 472          
BLAST of mRNA_H-elongata_contig6126.13673.1 vs. uniprot
Match: A0A835ZCQ8_9STRA (Glutamate--cysteine ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCQ8_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 8.840e-15
Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = 0
Query:    3 SNWQTVRWKPPPPRINPNDPHIGWRTEFRSLEIQLVRVE 41
            +NWQTVRWKPPPPR +PNDPHIGWRTEFRSLE+QL   E
Sbjct:  452 TNWQTVRWKPPPPRTSPNDPHIGWRTEFRSLEVQLTDFE 490          
BLAST of mRNA_H-elongata_contig6126.13673.1 vs. uniprot
Match: A0A7S2YK69_9STRA (Glutamate--cysteine ligase (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YK69_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 9.260e-15
Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = 0
Query:    3 SNWQTVRWKPPPPRINPNDPHIGWRTEFRSLEIQLVRVE 41
            +NWQTVRWKPPPPR +PNDPHIGWRTEFRS+EIQL   E
Sbjct:   77 TNWQTVRWKPPPPRNDPNDPHIGWRTEFRSMEIQLTDYE 115          
BLAST of mRNA_H-elongata_contig6126.13673.1 vs. uniprot
Match: A0A1Z5KPV7_FISSO (Glutamate--cysteine ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KPV7_FISSO)

HSP 1 Score: 77.0 bits (188), Expect = 4.260e-14
Identity = 31/39 (79.49%), Postives = 35/39 (89.74%), Query Frame = 0
Query:    3 SNWQTVRWKPPPPRINPNDPHIGWRTEFRSLEIQLVRVE 41
            +NWQTVRWKPPPPR +PNDPHIGWRTEFRS+E+QL   E
Sbjct:  630 TNWQTVRWKPPPPRNSPNDPHIGWRTEFRSMELQLTDFE 668          
BLAST of mRNA_H-elongata_contig6126.13673.1 vs. uniprot
Match: A0A7S1ZWD3_TRICV (Glutamate--cysteine ligase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZWD3_TRICV)

HSP 1 Score: 76.6 bits (187), Expect = 5.820e-14
Identity = 33/51 (64.71%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    3 SNWQTVRWKPPPPRINPNDPHIGWRTEFRSLEIQLVRVERCQTHLGTSELT 53
            +NWQ+VRWKPPPPR +PNDPH+GWRTEFRS+EIQL   E     + T  LT
Sbjct:  658 TNWQSVRWKPPPPRNDPNDPHVGWRTEFRSMEIQLTDFENAAFTVFTVLLT 708          
BLAST of mRNA_H-elongata_contig6126.13673.1 vs. uniprot
Match: K0RUT7_THAOC (Glutamate--cysteine ligase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RUT7_THAOC)

HSP 1 Score: 76.3 bits (186), Expect = 7.980e-14
Identity = 31/39 (79.49%), Postives = 34/39 (87.18%), Query Frame = 0
Query:    3 SNWQTVRWKPPPPRINPNDPHIGWRTEFRSLEIQLVRVE 41
            +NWQ+VRWKPPPPR  PNDPHIGWRTEFRS+EIQL   E
Sbjct:  722 TNWQSVRWKPPPPRSGPNDPHIGWRTEFRSMEIQLTDFE 760          
BLAST of mRNA_H-elongata_contig6126.13673.1 vs. uniprot
Match: B7FYG6_PHATC (Glutamate--cysteine ligase n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FYG6_PHATC)

HSP 1 Score: 75.5 bits (184), Expect = 1.450e-13
Identity = 30/39 (76.92%), Postives = 35/39 (89.74%), Query Frame = 0
Query:    3 SNWQTVRWKPPPPRINPNDPHIGWRTEFRSLEIQLVRVE 41
            +NWQ+VRWKPPPPR +PNDPHIGWRTEFRS+E+QL   E
Sbjct:  480 TNWQSVRWKPPPPRNSPNDPHIGWRTEFRSMELQLTDFE 518          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6126.13673.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP20_ECTSI3.490e-1582.05Glutamate--cysteine ligase n=2 Tax=Ectocarpus TaxI... [more]
A0A7S2KFJ0_9STRA5.520e-1576.92Glutamate--cysteine ligase (Fragment) n=1 Tax=Lept... [more]
A0A7S2WRG5_9STRA7.170e-1568.63Glutamate--cysteine ligase (Fragment) n=1 Tax=Euca... [more]
B8LE49_THAPS8.770e-1568.63Glutamate--cysteine ligase (Fragment) n=2 Tax=Thal... [more]
A0A835ZCQ8_9STRA8.840e-1582.05Glutamate--cysteine ligase n=1 Tax=Tribonema minus... [more]
A0A7S2YK69_9STRA9.260e-1582.05Glutamate--cysteine ligase (Fragment) n=1 Tax=Amph... [more]
A0A1Z5KPV7_FISSO4.260e-1479.49Glutamate--cysteine ligase n=2 Tax=Fistulifera sol... [more]
A0A7S1ZWD3_TRICV5.820e-1464.71Glutamate--cysteine ligase n=1 Tax=Trieres chinens... [more]
K0RUT7_THAOC7.980e-1479.49Glutamate--cysteine ligase n=1 Tax=Thalassiosira o... [more]
B7FYG6_PHATC1.450e-1376.92Glutamate--cysteine ligase n=3 Tax=Phaeodactylum t... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004308Glutamate-cysteine ligase catalytic subunitPFAMPF03074GCScoord: 3..42
e-value: 3.8E-11
score: 43.0
NoneNo IPR availableGENE3D3.30.590.50coord: 1..67
e-value: 2.5E-7
score: 32.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6126contigH-elongata_contig6126:5124..5465 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6126.13673.1mRNA_H-elongata_contig6126.13673.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6126 5124..5465 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6126.13673.1 ID=prot_H-elongata_contig6126.13673.1|Name=mRNA_H-elongata_contig6126.13673.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bp
LLSNWQTVRWKPPPPRINPNDPHIGWRTEFRSLEIQLVRVERCQTHLGTS
ELTLSCVVNMSPAKTRIISHANTMKRVAGFPEPRSNLSLIGRMARYSLVY
ARTAEGCKAKIHR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004308GCS