prot_H-elongata_contig61070.13653.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig61070.13653.1
Unique Nameprot_H-elongata_contig61070.13653.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length156
Homology
BLAST of mRNA_H-elongata_contig61070.13653.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY)

HSP 1 Score: 123 bits (308), Expect = 1.380e-29
Identity = 65/154 (42.21%), Postives = 95/154 (61.69%), Query Frame = 0
Query:    1 MGEAQESSEWPKWKRTIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGSRQVKGIHYEESSSPTPAQASIRMVLSMITALGWEAWQLDVDMTYLEAEVEEEIYVELPEAYLDSRKQ--VGLLKKAMYGLVHAG 152
            + EA +S+EWPKWK  IA+EM    + G + +VE PK   ++G++ VF+ K + +G IE YK RLVAQG  QV GI + E+ +P    ASIR++L++     WE  Q+DV   YL  ++EEEIY+  P    +  K+  V  LK+ +YGL  +G
Sbjct:  925 LNEAMQSTEWPKWKEAIAKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKEHLVCRLKRPLYGLKQSG 1078          
BLAST of mRNA_H-elongata_contig61070.13653.1 vs. uniprot
Match: A0A401GP19_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GP19_9APHY)

HSP 1 Score: 117 bits (294), Expect = 8.390e-28
Identity = 62/154 (40.26%), Postives = 93/154 (60.39%), Query Frame = 0
Query:    1 MGEAQESSEWPKWKRTIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGSRQVKGIHYEESSSPTPAQASIRMVLSMITALGWEAWQLDVDMTYLEAEVEEEIYVELPEAYLDSRKQ--VGLLKKAMYGLVHAG 152
            + EA +S+EWPKWK  I +EM    + G + +VE PK   ++G++ VF+ K + +  IE YK RLVAQG  QV GI + E+ +P    ASI ++L++     WE  Q+DV   YL  ++EEEIY++ P    +  K+  V  LK+ +YGL  +G
Sbjct:  115 LNEAMQSTEWPKWKEAIVKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEREIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIHLILALAACYDWELHQMDVKGAYLNGDLEEEIYMQQPPGQAEPGKEHLVCRLKRPLYGLKQSG 268          
BLAST of mRNA_H-elongata_contig61070.13653.1 vs. uniprot
Match: A0A177U0B1_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tilletia caries TaxID=13290 RepID=A0A177U0B1_9BASI)

HSP 1 Score: 114 bits (286), Expect = 7.890e-27
Identity = 57/146 (39.04%), Postives = 91/146 (62.33%), Query Frame = 0
Query:    7 SSEWPKWKRTIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGSRQVKGIHYEESSSPTPAQASIRMVLSMITALGWEAWQLDVDMTYLEAEVEEEIYVELPEAYLDSRKQVGLLKKAMYGLVHAG 152
            S+EW +WK+ +  E+   T  G W +VE   G  ++G+R V+K K+D+DG   +YK RLVAQG  Q +GI ++E+ +P     ++R+V+S+  ALG     +D+   YL  ++ EE+Y++ P  Y D   +V LL++A+YGL  AG
Sbjct:   34 SAEWAQWKQAMDEEVASLTEMGTWVLVEPRSGHNIVGSRWVYKLKLDRDGNAARYKARLVAQGFTQREGIDFKETFAPVARLVTVRLVISVALALGLHLGSIDIKTAYLNGKLHEEVYMQQPPEYDDGTGRVCLLRRAIYGLKQAG 179          
BLAST of mRNA_H-elongata_contig61070.13653.1 vs. uniprot
Match: A0A177VSQ5_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia controversa TaxID=13291 RepID=A0A177VSQ5_9BASI)

HSP 1 Score: 114 bits (286), Expect = 1.240e-26
Identity = 57/146 (39.04%), Postives = 91/146 (62.33%), Query Frame = 0
Query:    7 SSEWPKWKRTIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGSRQVKGIHYEESSSPTPAQASIRMVLSMITALGWEAWQLDVDMTYLEAEVEEEIYVELPEAYLDSRKQVGLLKKAMYGLVHAG 152
            S+EW +WK+ +  E+   T  G W +VE   G  ++G+R V+K K+D+DG   +YK RLVAQG  Q +GI ++E+ +P     ++R+V+S+  ALG     +D+   YL  ++ EE+Y++ P  Y D   +V LL++A+YGL  AG
Sbjct:  703 SAEWAQWKQAMDEEVASLTEMGTWVLVEPRSGHNIVGSRWVYKLKLDRDGNAARYKARLVAQGFTQREGIDFKETFAPVARLVTVRLVISVALALGLHLGSIDIKTAYLNGKLHEEVYMQQPPEYDDGTGRVCLLRRAIYGLKQAG 848          
BLAST of mRNA_H-elongata_contig61070.13653.1 vs. uniprot
Match: A0A1M2V8C6_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2V8C6_TRAPU)

HSP 1 Score: 114 bits (286), Expect = 1.260e-26
Identity = 62/152 (40.79%), Postives = 92/152 (60.53%), Query Frame = 0
Query:    3 EAQESSEWPKWKRTIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGSRQVKGIHYEESSSPTPAQASIRMVLSMITALGWEAWQLDVDMTYLEAEVEEEIYVELPEAYLDSRKQ--VGLLKKAMYGLVHAG 152
            EAQE+ +WPKW+  I  EMD   A   + +V RP G  V+G+R+VF RK D DG I++ K R+VAQG  Q+ G+ Y E+ +P    +S+R++L++     W   QLDV   YL  +++EEIY+  P       ++  V  L+K++YGL  AG
Sbjct:  993 EAQEAPDWPKWEEAITVEMDNLRAHSTYDLVVRPVGAHVIGSRLVFHRKRDADGSIKQCKVRVVAQGFGQIPGVDYNETFAPVAKSSSLRIMLALAARFSWPLIQLDVKSAYLNGDLDEEIYMRQPPGTAAQGEEHLVCRLRKSLYGLKQAG 1144          
BLAST of mRNA_H-elongata_contig61070.13653.1 vs. uniprot
Match: A0A151RGT1_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RGT1_CAJCA)

HSP 1 Score: 109 bits (272), Expect = 2.030e-26
Identity = 54/141 (38.30%), Postives = 86/141 (60.99%), Query Frame = 0
Query:   13 WKRTIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGSRQVKGIHYEESSSPTPAQASIRMVLSMITALGWEAWQLDVDMTYLEAEVEEEIYVELPEAYL--DSRKQVGLLKKAMYGLVHA 151
            W + +  EM+       W++V++P+ K  +G R +F  K   DG IE+YK RLVA+G  Q  GI Y+E+ +P     ++R+VL++    GW+  QLDV   +L   +EEE+Y+E+P+ +   + R +V LLKKA+YGL  +
Sbjct:    6 WTQAMKEEMNALERNSTWEIVDKPRDKKAIGCRWIFTVKHKADGTIERYKARLVAKGYTQTYGIDYKETFAPVAKMNTVRVVLALTAHFGWDLHQLDVKSAFLHGNLEEEVYMEIPQGFKVQNERNKVCLLKKALYGLTQS 146          
BLAST of mRNA_H-elongata_contig61070.13653.1 vs. uniprot
Match: A0A177U2V9_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U2V9_9BASI)

HSP 1 Score: 113 bits (282), Expect = 4.030e-26
Identity = 57/146 (39.04%), Postives = 90/146 (61.64%), Query Frame = 0
Query:    7 SSEWPKWKRTIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGSRQVKGIHYEESSSPTPAQASIRMVLSMITALGWEAWQLDVDMTYLEAEVEEEIYVELPEAYLDSRKQVGLLKKAMYGLVHAG 152
            S EW +WK+ +  E+   T  G W +VE   G  ++G+R V+K K+D+DG   +YK RLVAQG  Q +GI ++E+ +P     ++R+V+S+  ALG     +D+   YL  ++ EE+Y++ P  Y D   +V LL++A+YGL  AG
Sbjct:  232 SVEWAQWKQAMDEEVASLTEMGTWVLVEPRSGHNIVGSRWVYKLKLDRDGNAARYKARLVAQGFTQREGIDFKETFAPVARLVTVRLVISVALALGLHLGSIDIKTAYLNGKLHEEVYMQQPPEYDDGTGRVCLLRRAIYGLRQAG 377          
BLAST of mRNA_H-elongata_contig61070.13653.1 vs. uniprot
Match: A0A177TV96_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TV96_9BASI)

HSP 1 Score: 112 bits (280), Expect = 7.960e-26
Identity = 56/144 (38.89%), Postives = 89/144 (61.81%), Query Frame = 0
Query:    9 EWPKWKRTIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGSRQVKGIHYEESSSPTPAQASIRMVLSMITALGWEAWQLDVDMTYLEAEVEEEIYVELPEAYLDSRKQVGLLKKAMYGLVHAG 152
            EW  WK  +  E+        W++VE PKG+ V+G+R V+K K+D+DGR  +YK RLVAQG  Q  GI + ++ +P    ++IR+++S+  AL      +D+   YL  +++EE+Y++ P  Y D   +V LL++A+YGL  AG
Sbjct:  704 EWRHWKEAMDEEIGSLVEMKTWELVELPKGRDVVGSRWVYKLKLDRDGRASRYKGRLVAQGFTQRDGIDFSDTFAPVARLSTIRIIISLALALSLNLGSIDIKTAYLNGKLQEEVYMQQPPEYDDGTGRVCLLRRAIYGLKQAG 847          
BLAST of mRNA_H-elongata_contig61070.13653.1 vs. uniprot
Match: A0A834W6R1_9FABA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834W6R1_9FABA)

HSP 1 Score: 111 bits (278), Expect = 1.130e-25
Identity = 59/142 (41.55%), Postives = 90/142 (63.38%), Query Frame = 0
Query:   12 KWKRTIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGSRQVKGIHYEESSSPTPAQASIRMVLSMITALGWEAWQLDVDMTYLEAEVEEEIYVELPEAYL--DSRKQVGLLKKAMYGLVHA 151
            KWK  +  EM+     G W +V+RP  + V+GT+ VFK K++ DG I K+K  LVA+G  Q +G+ + E+ +P     +IR++L++    GW+ +QLDV   +L   +EE IY+E PE ++  D+ K+V LLKKA+YGL  A
Sbjct:  132 KWKDAMKEEMNMIEKNGTWLLVDRPSDQQVIGTKWVFKTKLNPDGSISKHKAILVAKGYSQQQGVDFSENFAPVARFDTIRLLLALAAHKGWKVYQLDVKSAFLNGVLEERIYIEQPEGFVIEDAAKKVYLLKKALYGLKQA 273          
BLAST of mRNA_H-elongata_contig61070.13653.1 vs. uniprot
Match: A0A177TMV6_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TMV6_9BASI)

HSP 1 Score: 110 bits (276), Expect = 2.740e-25
Identity = 54/144 (37.50%), Postives = 87/144 (60.42%), Query Frame = 0
Query:    9 EWPKWKRTIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGSRQVKGIHYEESSSPTPAQASIRMVLSMITALGWEAWQLDVDMTYLEAEVEEEIYVELPEAYLDSRKQVGLLKKAMYGLVHAG 152
            EW  W++ +  E+      G W +V+ PKG+ ++G+R VFK K+D++G   +YK RLVAQG  Q +GI + E+ +P     +IR+ +S+  A G     +D+   YL  ++ EE+Y++ P  Y D   +V LL++A+YGL  AG
Sbjct:  705 EWHNWQKAMGEEVSSLKEMGTWTLVDLPKGREMVGSRWVFKLKLDREGCAARYKARLVAQGFTQREGIDFSETFAPVARLGTIRITISLALAFGLNLHSIDIKTAYLNGKLSEEVYIQQPPEYDDGTGRVCLLRRAIYGLKQAG 848          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61070.13653.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A401GN13_9APHY1.380e-2942.21Uncharacterized protein n=1 Tax=Sparassis crispa T... [more]
A0A401GP19_9APHY8.390e-2840.26Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177U0B1_9BASI7.890e-2739.04Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177VSQ5_9BASI1.240e-2639.04Integrase catalytic domain-containing protein n=1 ... [more]
A0A1M2V8C6_TRAPU1.260e-2640.79Retrovirus-related Pol polyprotein from transposon... [more]
A0A151RGT1_CAJCA2.030e-2638.30Retrovirus-related Pol polyprotein from transposon... [more]
A0A177U2V9_9BASI4.030e-2639.04Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177TV96_9BASI7.960e-2638.89Integrase catalytic domain-containing protein n=1 ... [more]
A0A834W6R1_9FABA1.130e-2541.55Retrovirus-related Pol polyprotein from transposon... [more]
A0A177TMV6_9BASI2.740e-2537.50Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 29..153
e-value: 2.0E-29
score: 103.0
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 8..148
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 8..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig61070contigH-elongata_contig61070:616..1083 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig61070.13653.1mRNA_H-elongata_contig61070.13653.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig61070 487..1095 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig61070.13653.1 ID=prot_H-elongata_contig61070.13653.1|Name=mRNA_H-elongata_contig61070.13653.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp
MGEAQESSEWPKWKRTIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKR
KIDKDGRIEKYKCRLVAQGSRQVKGIHYEESSSPTPAQASIRMVLSMITA
LGWEAWQLDVDMTYLEAEVEEEIYVELPEAYLDSRKQVGLLKKAMYGLVH
AGLLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like