prot_H-elongata_contig6105.13652.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6105.13652.1
Unique Nameprot_H-elongata_contig6105.13652.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length168
Homology
BLAST of mRNA_H-elongata_contig6105.13652.1 vs. uniprot
Match: A0A6H5JUS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS2_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 3.390e-65
Identity = 96/163 (58.90%), Postives = 123/163 (75.46%), Query Frame = 0
Query:    1 MITRNMWQEAGIINGIQGEVQEIVYDEGKAAPEQPRYVVVKLDGYTGPQWSDEDRYRDCALIAPVETSWSLPGQDHEGGTMTRTQLPLKLCWDITMHKSQGQALSKAVIDFWEKEVCTGLTFVCLSRAKKLTDLLIEPMPFDRLSRLSGKPVFKARLQEEVRL 163
            M+++N++Q+ G++NGI+GEV E+V  +    P+ P YVVVK +GY+G +WS ++RYR C  I+PV+T+W       +GGT  RTQLPL+LCW ITMHKSQGQ L+KAVID   KE CTGLTFVCLSRAK+L DL++EPM FDR+  L   P  KARLQEEVRL
Sbjct:  110 MLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQ------DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRL 266          
BLAST of mRNA_H-elongata_contig6105.13652.1 vs. uniprot
Match: A0A6H5JFG8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG8_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 3.600e-63
Identity = 96/163 (58.90%), Postives = 123/163 (75.46%), Query Frame = 0
Query:    1 MITRNMWQEAGIINGIQGEVQEIVYDEGKAAPEQPRYVVVKLDGYTGPQWSDEDRYRDCALIAPVETSWSLPGQDHEGGTMTRTQLPLKLCWDITMHKSQGQALSKAVIDFWEKEVCTGLTFVCLSRAKKLTDLLIEPMPFDRLSRLSGKPVFKARLQEEVRL 163
            M+++N++Q+ G++NGI+GEV E+V  +    P+ P YVVVK +GY+G +WS ++RYR C  I+PV+T+W       +GGT  RTQLPL+LCW ITMHKSQGQ L+KAVID   KE CTGLTFVCLSRAK+L DL++EPM FDR+  L   P  KARLQEEVRL
Sbjct:  284 MLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQ------DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRL 440          
BLAST of mRNA_H-elongata_contig6105.13652.1 vs. uniprot
Match: A0A6H5K4U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U7_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 5.590e-63
Identity = 96/163 (58.90%), Postives = 123/163 (75.46%), Query Frame = 0
Query:    1 MITRNMWQEAGIINGIQGEVQEIVYDEGKAAPEQPRYVVVKLDGYTGPQWSDEDRYRDCALIAPVETSWSLPGQDHEGGTMTRTQLPLKLCWDITMHKSQGQALSKAVIDFWEKEVCTGLTFVCLSRAKKLTDLLIEPMPFDRLSRLSGKPVFKARLQEEVRL 163
            M+++N++Q+ G++NGI+GEV E+V  +    P+ P YVVVK +GY+G +WS ++RYR C  I+PV+T+W       +GGT  RTQLPL+LCW ITMHKSQGQ L+KAVID   KE CTGLTFVCLSRAK+L DL++EPM FDR+  L   P  KARLQEEVRL
Sbjct:    1 MLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQ------DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRL 157          
BLAST of mRNA_H-elongata_contig6105.13652.1 vs. uniprot
Match: A0A6H5L976_9PHAE (ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L976_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 3.580e-58
Identity = 97/172 (56.40%), Postives = 124/172 (72.09%), Query Frame = 0
Query:    1 MITRNMWQEAGIINGIQGEVQEIVYDEGKAAPEQPRYVVVKLDGYTGPQWSDEDRYRDCALIAPVETSWSLPGQDHEGGTMTRTQLPLKLCWDITMHKSQGQALSKAVIDFWEKEVCTGLTFVCLSRAKKLTDLLIEPMPFDRLSRLSGKPVFKARLQEEV-----RLKAIF 167
            M+++N++Q+ G++NGI+GEV E+V  +    P+ P YVVVK +GY+G +WS ++RYR C  I+PV+T+W       +GGT  RTQLPL+LCW ITMHKSQGQ L+KAVID   KE CTGLTFVCLSRAK+L DL++EPM FDR+  L   P  KARLQEE      R  AIF
Sbjct: 1415 MLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQ------DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEASDALDRQNAIF 1580          
BLAST of mRNA_H-elongata_contig6105.13652.1 vs. uniprot
Match: A0A6H5KSF1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF1_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 2.270e-38
Identity = 63/87 (72.41%), Postives = 70/87 (80.46%), Query Frame = 0
Query:   77 EGGTMTRTQLPLKLCWDITMHKSQGQALSKAVIDFWEKEVCTGLTFVCLSRAKKLTDLLIEPMPFDRLSRLSGKPVFKARLQEEVRL 163
            +GGT  RTQLPL+LCW ITMHKSQGQ L+KAVID   KE CTGLTFVCLSRAK+L DL++EPM FDR+  L   P  KARLQEEVRL
Sbjct:    9 DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRL 95          
BLAST of mRNA_H-elongata_contig6105.13652.1 vs. uniprot
Match: A0A6H5JMH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMH2_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 5.240e-38
Identity = 68/107 (63.55%), Postives = 77/107 (71.96%), Query Frame = 0
Query:   57 RDCALIAPVETSWSLPGQDHEGGTMTRTQLPLKLCWDITMHKSQGQALSKAVIDFWEKEVCTGLTFVCLSRAKKLTDLLIEPMPFDRLSRLSGKPVFKARLQEEVRL 163
            +DC      +  WS   +D  GGT  RTQLPL+LCW ITMHKSQGQ L+KAVID   KE CTGLTFVCLSRAK+L DL++EPM FDR+  L   P  KARLQEEVRL
Sbjct:   56 KDCRQACGGDR-WSTGRKD--GGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRL 159          
BLAST of mRNA_H-elongata_contig6105.13652.1 vs. uniprot
Match: A0A6H5KCP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP5_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 1.450e-37
Identity = 63/87 (72.41%), Postives = 70/87 (80.46%), Query Frame = 0
Query:   77 EGGTMTRTQLPLKLCWDITMHKSQGQALSKAVIDFWEKEVCTGLTFVCLSRAKKLTDLLIEPMPFDRLSRLSGKPVFKARLQEEVRL 163
            +GGT  RTQLPL+LCW ITMHKSQGQ L+KAVID   KE CTGLTFVCLSRAK+L DL++EPM FDR+  L   P  KARLQEEVRL
Sbjct:    7 DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRL 93          
BLAST of mRNA_H-elongata_contig6105.13652.1 vs. uniprot
Match: A0A6H5KN08_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN08_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 3.250e-36
Identity = 63/87 (72.41%), Postives = 70/87 (80.46%), Query Frame = 0
Query:   77 EGGTMTRTQLPLKLCWDITMHKSQGQALSKAVIDFWEKEVCTGLTFVCLSRAKKLTDLLIEPMPFDRLSRLSGKPVFKARLQEEVRL 163
            +GGT  RTQLPL+LCW ITMHKSQGQ L+KAVID   KE CTGLTFVCLSRAK+L DL++EPM FDR+  L   P  KARLQEEVRL
Sbjct:    7 DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEEVRL 93          
BLAST of mRNA_H-elongata_contig6105.13652.1 vs. uniprot
Match: A0A6H5KFN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN2_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 5.700e-36
Identity = 60/84 (71.43%), Postives = 67/84 (79.76%), Query Frame = 0
Query:   77 EGGTMTRTQLPLKLCWDITMHKSQGQALSKAVIDFWEKEVCTGLTFVCLSRAKKLTDLLIEPMPFDRLSRLSGKPVFKARLQEE 160
            +GGT  RTQLPL+LCW ITMHKSQGQ L+KAVID   KE CTGLTFVCLSRAK+L DL++EPM FDR+  L   P  KARLQEE
Sbjct:    7 DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNSPTMKARLQEE 90          
BLAST of mRNA_H-elongata_contig6105.13652.1 vs. uniprot
Match: UPI00106B9E63 (uncharacterized protein LOC114530406 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106B9E63)

HSP 1 Score: 135 bits (339), Expect = 6.710e-36
Identity = 69/164 (42.07%), Postives = 97/164 (59.15%), Query Frame = 0
Query:    1 MITRNMWQEAGIINGIQGEVQEIVYDEGKAAPEQPRYVVVKLDGYTGPQWSDEDRYRDCALIAPVETSWSLPGQDHEGGTMTRTQLPLKLCWDITMHKSQGQALSKAVIDFWEKEVCTGLTFVCLSRAKKLTDLLIEPMPFDRLSRLSGKPVFKARLQEEVRLK 164
            M+T N+W  AG+ NG+ G +++I+Y + +  P  P  VVVK D Y GP +S       C  I+P+  S +L    HE     R QLPL L W +T+HKSQG  + K  +D  +KE   G+++V LSR +KL+ ++IEPMPFDRLS +        RL EE RL+
Sbjct:  122 MLTMNLWPSAGLCNGVTGYIEDIIYAQSQEPPLLPTAVVVKFDNYIGPSFSTTPC---CVPISPITVSVNLNNVIHE-----RQQLPLTLAWALTIHKSQGMTIDKLWVDIGKKEHSLGMSYVALSRVRKLSSMVIEPMPFDRLSSIKKSDTLHYRLIEEKRLE 277          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6105.13652.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUS2_9PHAE3.390e-6558.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFG8_9PHAE3.600e-6358.90Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K4U7_9PHAE5.590e-6358.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L976_9PHAE3.580e-5856.40ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. ... [more]
A0A6H5KSF1_9PHAE2.270e-3872.41Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMH2_9PHAE5.240e-3863.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCP5_9PHAE1.450e-3772.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KN08_9PHAE3.250e-3672.41Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KFN2_9PHAE5.700e-3671.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI00106B9E636.710e-3642.07uncharacterized protein LOC114530406 n=1 Tax=Dendr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23274DNA HELICASE-RELATEDcoord: 1..140
NoneNo IPR availablePANTHERPTHR23274:SF32ATP-DEPENDENT DNA HELICASE PIF1coord: 1..140
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6105contigH-elongata_contig6105:10274..10777 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6105.13652.1mRNA_H-elongata_contig6105.13652.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6105 10247..10777 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6105.13652.1 ID=prot_H-elongata_contig6105.13652.1|Name=mRNA_H-elongata_contig6105.13652.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=168bp
MITRNMWQEAGIINGIQGEVQEIVYDEGKAAPEQPRYVVVKLDGYTGPQW
SDEDRYRDCALIAPVETSWSLPGQDHEGGTMTRTQLPLKLCWDITMHKSQ
GQALSKAVIDFWEKEVCTGLTFVCLSRAKKLTDLLIEPMPFDRLSRLSGK
PVFKARLQEEVRLKAIF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase