prot_H-elongata_contig61014.13646.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig61014.13646.1 vs. uniprot
Match: D7FSQ2_ECTSI (RNA_pol_Rbc25 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSQ2_ECTSI) HSP 1 Score: 104 bits (260), Expect = 1.020e-25 Identity = 49/62 (79.03%), Postives = 54/62 (87.10%), Query Frame = 0
Query: 7 TTQVAPSKFSGHSLEVLTSQIETKFVDRVIVNVGLCLGLHSYESIGDPYVYPSDGSAHYKAR 68
T VAPSKFSG +L+VLT+QIE KF DRVI NVGLC+ LHSYESIGDPYVYPSDG+AHYK R
Sbjct: 27 TIWVAPSKFSGDALDVLTAQIEAKFADRVIANVGLCICLHSYESIGDPYVYPSDGAAHYKVR 88
BLAST of mRNA_H-elongata_contig61014.13646.1 vs. uniprot
Match: A0A835YK61_9STRA (RNA polymerase III subunit Rpc25-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK61_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 4.750e-14 Identity = 33/67 (49.25%), Postives = 48/67 (71.64%), Query Frame = 0
Query: 1 IAALPSTTQVAPSKFSGHSLEVLTSQIETKFVDRVIVNVGLCLGLHSYESIGDPYVYPSDGSAHYKA 67
+A + +V P F +L+VLT ++ K+ ++VI+NVGL + LHS+ES+GD VYPSDGSAHY+A
Sbjct: 4 LATVRDNLKVIPESFDRPTLDVLTEVVDMKYSNKVIINVGLAICLHSFESVGDALVYPSDGSAHYEA 70
BLAST of mRNA_H-elongata_contig61014.13646.1 vs. uniprot
Match: A0A6V1SWR7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SWR7_HETAK) HSP 1 Score: 72.0 bits (175), Expect = 7.490e-14 Identity = 30/67 (44.78%), Postives = 48/67 (71.64%), Query Frame = 0
Query: 1 IAALPSTTQVAPSKFSGHSLEVLTSQIETKFVDRVIVNVGLCLGLHSYESIGDPYVYPSDGSAHYKA 67
+A + + ++ PS F + ++ LT +I+ K+ ++VI++VGLC+ L +E IGD Y+YP DGSAHYKA
Sbjct: 4 LAVVKDSVKIHPSAFDKNQIQALTEEIDHKYANKVILDVGLCICLFDFEHIGDAYIYPLDGSAHYKA 70
BLAST of mRNA_H-elongata_contig61014.13646.1 vs. uniprot
Match: A0A4D9CXH6_9STRA (RNA_pol_Rbc25 domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXH6_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 2.700e-11 Identity = 26/66 (39.39%), Postives = 49/66 (74.24%), Query Frame = 0
Query: 1 IAALPSTTQVAPSKFSGHSLEVLTSQIETKFVDRVIVNVGLCLGLHSYESIGDPYVYPSDGSAHYK 66
+A + T +V P+ F+ + +EVLT +++ K+ +R++++VGL + L+ + IGD Y+YPSDG+AH++
Sbjct: 4 LAVIRDTIKVPPASFNRNQIEVLTEEVDRKYANRIVMDVGLGVCLYDFVDIGDAYLYPSDGAAHHR 69
BLAST of mRNA_H-elongata_contig61014.13646.1 vs. uniprot
Match: A0A7S3H250_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H250_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 3.940e-11 Identity = 28/55 (50.91%), Postives = 41/55 (74.55%), Query Frame = 0
Query: 9 QVAPSKFSGHSLEVLTSQIETKFVDRVIVNVGLCLGLHSYESIGDPYVYPSDGSA 63
+ AP +F + EVL QIE K+ +RV+++VGLC+ + + SIGDPY+YPS+GSA
Sbjct: 5 KTAPDQFGRDAAEVLKEQIEIKYANRVLLHVGLCITFYDFISIGDPYLYPSEGSA 59
BLAST of mRNA_H-elongata_contig61014.13646.1 vs. uniprot
Match: A0A7S2SVH5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVH5_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 2.420e-10 Identity = 27/65 (41.54%), Postives = 44/65 (67.69%), Query Frame = 0
Query: 1 IAALPSTTQVAPSKFSGHSLEVLTSQIETKFVDRVIVNVGLCLGLHSYESIGDPYVYPSDGSAHY 65
++ L +VAP KF +EVL+ +++ K+ ++VI N+GLC+ H ++SI + VYPSDG AH+
Sbjct: 4 LSVLRDVVRVAPDKFDRDLVEVLSEELDKKYANKVIPNIGLCICTHDFKSIEEAKVYPSDGGAHH 68
BLAST of mRNA_H-elongata_contig61014.13646.1 vs. uniprot
Match: A0A2P4YAB6_9STRA (DNA-directed RNA polymerase III subunit RPC8 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YAB6_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 1.330e-9 Identity = 25/55 (45.45%), Postives = 39/55 (70.91%), Query Frame = 0
Query: 10 VAPSKFSGHSLEVLTSQIETKFVDRVIVNVGLCLGLHSYESIGDPYVYPSDGSAH 64
VAP F +VL +I+ K+ ++VI +VGLC+ L+ + SIGD +V+PSDG++H
Sbjct: 13 VAPELFDADYTQVLVEEIDRKYANKVIADVGLCITLYDFVSIGDAFVHPSDGTSH 67
BLAST of mRNA_H-elongata_contig61014.13646.1 vs. uniprot
Match: A0A1V9Z282_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z282_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 1.460e-9 Identity = 26/56 (46.43%), Postives = 40/56 (71.43%), Query Frame = 0
Query: 9 QVAPSKFSGHSLEVLTSQIETKFVDRVIVNVGLCLGLHSYESIGDPYVYPSDGSAH 64
Q+AP FS VLT +I+ K+ ++VI +VGLC+ L+ + IGD Y++PSDG++H
Sbjct: 12 QIAPELFSTDYSSVLTEEIDRKYANKVIADVGLCITLYDFIEIGDAYIHPSDGTSH 67
BLAST of mRNA_H-elongata_contig61014.13646.1 vs. uniprot
Match: A0A2R5GFT2_9STRA (DNA-directed RNA polymerase III subunit rpc8 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GFT2_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 1.850e-9 Identity = 26/61 (42.62%), Postives = 41/61 (67.21%), Query Frame = 0
Query: 4 LPSTTQVAPSKFSGHSLEVLTSQIETKFVDRVIVNVGLCLGLHSYESIGDPYVYPSDGSAH 64
L T +V PS+F L VLT +++K+ ++V+ NVGLC+ L + +IGD Y++P DG+ H
Sbjct: 7 LRDTLRVDPSQFGREKLSVLTRLVDSKYANKVVPNVGLCVCLKEFVTIGDAYIFPGDGACH 67
BLAST of mRNA_H-elongata_contig61014.13646.1 vs. uniprot
Match: A0A067CHA1_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CHA1_SAPPC) HSP 1 Score: 60.8 bits (146), Expect = 2.150e-9 Identity = 25/56 (44.64%), Postives = 39/56 (69.64%), Query Frame = 0
Query: 9 QVAPSKFSGHSLEVLTSQIETKFVDRVIVNVGLCLGLHSYESIGDPYVYPSDGSAH 64
Q+AP F VLT +I+ K+ ++VI +VGLC+ L+ + IGD Y++PSDG++H
Sbjct: 12 QIAPELFGTDYSSVLTEEIDRKYANKVIADVGLCITLYDFIEIGDAYIHPSDGTSH 67 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61014.13646.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig61014.13646.1 ID=prot_H-elongata_contig61014.13646.1|Name=mRNA_H-elongata_contig61014.13646.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=77bpback to top |