prot_H-elongata_contig61006.13642.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig61006.13642.1 vs. uniprot
Match: D7FWG1_ECTSI (Sm protein F n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWG1_ECTSI) HSP 1 Score: 106 bits (264), Expect = 1.380e-28 Identity = 51/55 (92.73%), Postives = 52/55 (94.55%), Query Frame = 0
Query: 3 GFLVSVDTYMNLLLTSTEEYVDGQFAGNLGDVLIRCNNVLYLRGAEEDEDTAKAD 57
GFLVSVDTYMNLLLTSTEEYVDG+FAGNLGDVLIRCNNVLYLRG EEDE AKAD
Sbjct: 32 GFLVSVDTYMNLLLTSTEEYVDGEFAGNLGDVLIRCNNVLYLRGVEEDEANAKAD 86
BLAST of mRNA_H-elongata_contig61006.13642.1 vs. uniprot
Match: A0A176VZF1_MARPO (Sm protein F n=3 Tax=Viridiplantae TaxID=33090 RepID=A0A176VZF1_MARPO) HSP 1 Score: 93.6 bits (231), Expect = 9.930e-24 Identity = 42/58 (72.41%), Postives = 49/58 (84.48%), Query Frame = 0
Query: 1 HPGFLVSVDTYMNLLLTSTEEYVDGQFAGNLGDVLIRCNNVLYLRGAEEDEDTAKADD 58
+ G+LVSVD+YMNL L STEEY+DGQF GNLG+VLIRCNNVLYLRG EDED + D+
Sbjct: 30 YKGYLVSVDSYMNLQLASTEEYIDGQFTGNLGEVLIRCNNVLYLRGVPEDEDAVEEDE 87
BLAST of mRNA_H-elongata_contig61006.13642.1 vs. uniprot
Match: A0A7J6WA49_THATH (Sm protein F n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6WA49_THATH) HSP 1 Score: 92.4 bits (228), Expect = 3.550e-23 Identity = 41/57 (71.93%), Postives = 49/57 (85.96%), Query Frame = 0
Query: 1 HPGFLVSVDTYMNLLLTSTEEYVDGQFAGNLGDVLIRCNNVLYLRGAEEDEDTAKAD 57
+ GFLVSVD+YMNL L +TEEY+DGQF GNLG++LIRCNNVLYLRG EDE+ +AD
Sbjct: 37 YKGFLVSVDSYMNLQLANTEEYIDGQFTGNLGEILIRCNNVLYLRGVPEDEEIEEAD 93
BLAST of mRNA_H-elongata_contig61006.13642.1 vs. uniprot
Match: A9S411_PHYPA (Sm protein F n=5 Tax=Streptophytina TaxID=131221 RepID=A9S411_PHYPA) HSP 1 Score: 92.0 bits (227), Expect = 4.040e-23 Identity = 42/58 (72.41%), Postives = 49/58 (84.48%), Query Frame = 0
Query: 1 HPGFLVSVDTYMNLLLTSTEEYVDGQFAGNLGDVLIRCNNVLYLRGAEEDEDTAKADD 58
+ G+LVSVD+YMNL L STEE+VDG F GNLG+VLIRCNNV+YLRG EDED A+ DD
Sbjct: 30 YKGYLVSVDSYMNLQLASTEEFVDGAFTGNLGEVLIRCNNVMYLRGVPEDEDAAEDDD 87
BLAST of mRNA_H-elongata_contig61006.13642.1 vs. uniprot
Match: A0A835M2E4_9MAGN (Sm protein F n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835M2E4_9MAGN) HSP 1 Score: 91.7 bits (226), Expect = 6.070e-23 Identity = 40/57 (70.18%), Postives = 49/57 (85.96%), Query Frame = 0
Query: 1 HPGFLVSVDTYMNLLLTSTEEYVDGQFAGNLGDVLIRCNNVLYLRGAEEDEDTAKAD 57
+ G+LVSVD+YMNL L +TEEY+DG+F GNLG++LIRCNNVLYLRG EDED +AD
Sbjct: 31 YKGYLVSVDSYMNLQLANTEEYIDGKFTGNLGEILIRCNNVLYLRGVPEDEDITEAD 87
BLAST of mRNA_H-elongata_contig61006.13642.1 vs. uniprot
Match: A0A7I4DH71_PHYPA (Sm protein F n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4DH71_PHYPA) HSP 1 Score: 92.4 bits (228), Expect = 7.290e-23 Identity = 42/58 (72.41%), Postives = 49/58 (84.48%), Query Frame = 0
Query: 1 HPGFLVSVDTYMNLLLTSTEEYVDGQFAGNLGDVLIRCNNVLYLRGAEEDEDTAKADD 58
H G+LVSVD+YMNL L STEE+VDG F GNLG+VLIRCNNV+YLRG EDED A+ D+
Sbjct: 64 HGGYLVSVDSYMNLQLASTEEFVDGAFTGNLGEVLIRCNNVMYLRGVPEDEDAAEDDE 121
BLAST of mRNA_H-elongata_contig61006.13642.1 vs. uniprot
Match: B9RUD7_RICCO (Sm protein F n=1 Tax=Ricinus communis TaxID=3988 RepID=B9RUD7_RICCO) HSP 1 Score: 90.5 bits (223), Expect = 8.420e-23 Identity = 41/55 (74.55%), Postives = 46/55 (83.64%), Query Frame = 0
Query: 3 GFLVSVDTYMNLLLTSTEEYVDGQFAGNLGDVLIRCNNVLYLRGAEEDEDTAKAD 57
GFL SVD+YMNL L +TEEY+DGQF GNLG++LIRCNNVLYLRG EDED AD
Sbjct: 6 GFLASVDSYMNLQLGNTEEYIDGQFTGNLGEILIRCNNVLYLRGVPEDEDIEDAD 60
BLAST of mRNA_H-elongata_contig61006.13642.1 vs. uniprot
Match: A0A804J679_MUSAM (Sm protein F n=10 Tax=Mesangiospermae TaxID=1437183 RepID=A0A804J679_MUSAM) HSP 1 Score: 90.9 bits (224), Expect = 1.130e-22 Identity = 41/57 (71.93%), Postives = 48/57 (84.21%), Query Frame = 0
Query: 1 HPGFLVSVDTYMNLLLTSTEEYVDGQFAGNLGDVLIRCNNVLYLRGAEEDEDTAKAD 57
+ G+LVSVD+YMNL L +TEEYVDGQF GNLG++LIRCNNVLYLRG EDE+ AD
Sbjct: 30 YKGYLVSVDSYMNLQLANTEEYVDGQFTGNLGEILIRCNNVLYLRGVPEDEEIEDAD 86
BLAST of mRNA_H-elongata_contig61006.13642.1 vs. uniprot
Match: A0A6P9F5Z8_JUGRE (Sm protein F n=4 Tax=Mesangiospermae TaxID=1437183 RepID=A0A6P9F5Z8_JUGRE) HSP 1 Score: 90.9 bits (224), Expect = 1.160e-22 Identity = 40/57 (70.18%), Postives = 48/57 (84.21%), Query Frame = 0
Query: 1 HPGFLVSVDTYMNLLLTSTEEYVDGQFAGNLGDVLIRCNNVLYLRGAEEDEDTAKAD 57
+ GFL SVD+YMNL L +TEEY+DGQF GNLG++LIRCNNVLYLRG EDE+ +AD
Sbjct: 29 YKGFLASVDSYMNLQLANTEEYIDGQFTGNLGEILIRCNNVLYLRGVPEDEEIEEAD 85
BLAST of mRNA_H-elongata_contig61006.13642.1 vs. uniprot
Match: UPI00201A8FA9 (probable small nuclear ribonucleoprotein F isoform X1 n=2 Tax=Ricinus communis TaxID=3988 RepID=UPI00201A8FA9) HSP 1 Score: 90.9 bits (224), Expect = 1.490e-22 Identity = 41/57 (71.93%), Postives = 47/57 (82.46%), Query Frame = 0
Query: 1 HPGFLVSVDTYMNLLLTSTEEYVDGQFAGNLGDVLIRCNNVLYLRGAEEDEDTAKAD 57
+ GFL SVD+YMNL L +TEEY+DGQF GNLG++LIRCNNVLYLRG EDED AD
Sbjct: 38 YKGFLASVDSYMNLQLGNTEEYIDGQFTGNLGEILIRCNNVLYLRGVPEDEDIEDAD 94 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61006.13642.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig61006.13642.1 ID=prot_H-elongata_contig61006.13642.1|Name=mRNA_H-elongata_contig61006.13642.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=58bpback to top |