prot_H-elongata_contig60962.13639.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig60962.13639.1
Unique Nameprot_H-elongata_contig60962.13639.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length82
Homology
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BLAST of mRNA_H-elongata_contig60962.13639.1 vs. uniprot
Match: A0A6H5L308_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L308_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 3.980e-8
Identity = 26/30 (86.67%), Postives = 29/30 (96.67%), Query Frame = 0 
Query:   53 QCRTVMNINLAKAGNWVLLEGVDASIHKTA 82
            Q RTVM+IN+AKAGNWVLLEGVDA+IHKTA
Sbjct:  560 QGRTVMDINMAKAGNWVLLEGVDATIHKTA 589
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60962.13639.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L308_9PHAE3.980e-886.67Tr-type G domain-containing protein n=2 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig60962contigH-elongata_contig60962:1172..2711 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig60962.13639.1mRNA_H-elongata_contig60962.13639.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig60962 1172..2711 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig60962.13639.1 ID=prot_H-elongata_contig60962.13639.1|Name=mRNA_H-elongata_contig60962.13639.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=82bp
AHSFAGGERSEKGCTAARCGRDRKQGARGGVLHTGRGGYGDQGGDGHQHQ
PGQCRTVMNINLAKAGNWVLLEGVDASIHKTA
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