prot_H-elongata_contig60945.13636.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig60945.13636.1
Unique Nameprot_H-elongata_contig60945.13636.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length125
Homology
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BLAST of mRNA_H-elongata_contig60945.13636.1 vs. uniprot
Match: D8LEK4_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK4_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 7.370e-49
Identity = 81/123 (65.85%), Postives = 99/123 (80.49%), Query Frame = 0 
Query:    2 KNQKPLYTSPPPPGQRFHNEAEWKAWHYGVDAIQTDPFQQESNWLDLRNNKHQAYFRRQQDREKAMYGVGRGHKFNASRQRYEVIERVRMRREVRLQREKETRMRSEGGTGRESASDAVCSIS 124
            K Q+PLYT+ PPPG + HNE EWKAWHYGVDA+Q + F QE+NWLDL  N+HQAYFRRQ+ +EKAMYGVGRGHKFNASRQR++VIERVR+RRE RL+R++  R   +      +A+D VCSIS
Sbjct:   88 KAQQPLYTAKPPPGMKIHNEGEWKAWHYGVDAVQKEAFVQEANWLDLEGNRHQAYFRRQEKKEKAMYGVGRGHKFNASRQRHDVIERVRLRREERLKRDRSRRPAEDN-----AAADDVCSIS 205
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60945.13636.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEK4_ECTSI7.370e-4965.85Heat shock protein 40 like protein/ DnaJ domain co... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig60945contigH-elongata_contig60945:766..1963 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig60945.13636.1mRNA_H-elongata_contig60945.13636.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig60945 590..2811 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig60945.13636.1 ID=prot_H-elongata_contig60945.13636.1|Name=mRNA_H-elongata_contig60945.13636.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=125bp
MKNQKPLYTSPPPPGQRFHNEAEWKAWHYGVDAIQTDPFQQESNWLDLRN
NKHQAYFRRQQDREKAMYGVGRGHKFNASRQRYEVIERVRMRREVRLQRE
KETRMRSEGGTGRESASDAVCSIS*
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