prot_H-elongata_contig60837.13623.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig60837.13623.1
Unique Nameprot_H-elongata_contig60837.13623.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length250
Homology
BLAST of mRNA_H-elongata_contig60837.13623.1 vs. uniprot
Match: A0A6H5KI28_9PHAE (EngB-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KI28_9PHAE)

HSP 1 Score: 293 bits (749), Expect = 4.830e-97
Identity = 148/248 (59.68%), Postives = 180/248 (72.58%), Query Frame = 0
Query:    1 MRSLEVLRRLHGQLAVATRSPWVWVVQGVHPDTVPPISHPRP-----SLRGEYVTPASLGYELPKCRQPEVAFAGRSNAGKSTLIGQLVGNSKLVRTSKAPGCTKTVNFFTVRDGDVPHLDLYLVDLPGYGFARQNKRAVREWTKIVHNYLDGRPRVVLQRTFVLVDSRHGIQPGDEHMLSVLDNAQVPNQVVLTKVDKVTPHDLVRSIESVCRAIVVHPSSVPVVHCVSAHKGLGMEEFTNTVWNLT 243
            MRS    RRL GQL+VAT SPWVWV  GV P +     HP P     SLRGEYV+PAS  +ELP    PEVAF GRSN GKSTL+G+L+GN KLVR SKAPGCTKTVN+F +R+G       +LVDLPGYGFAR++KRAVR W + V +YL+GR   VL+RTFVLVD RHG+QP DE MLS L +  V N VVLTKVDK +P  LV+S+E   +  V HP+++P+VHC+SAHKG GM EF NT++ ++
Sbjct:    1 MRSSAAFRRLRGQLSVATSSPWVWVATGVDPASA---IHPPPRKRGLSLRGEYVSPASFNHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGGAESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLEGAFQLAVHHPATLPIVHCISAHKGQGMGEFQNTLYGVS 245          
BLAST of mRNA_H-elongata_contig60837.13623.1 vs. uniprot
Match: A0A835YYM3_9STRA (YihA2, YihA/EngB-like GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYM3_9STRA)

HSP 1 Score: 199 bits (505), Expect = 5.750e-60
Identity = 102/238 (42.86%), Postives = 149/238 (62.61%), Query Frame = 0
Query:   18 TRSPWVWVVQGVHPD-----TVPPISHPRPSLRGEYVTPASLGYELPKCRQPEVAFAGRSNAGKSTLIGQLVGNSKLVRTSKAPGCTKTVNFFTV-------RDGDVPHLDLYLVDLPGYGFARQNKRAVREWTKIVHNYLDGRPRVVLQRTFVLVDSRHGIQPGDEHMLSVLDNAQVPNQVVLTKVDKVTPHDLVRSIESVCRAIVVHPSSVPVVHCVSAHKGLGMEEFTNTVWNLT 243
            T+SPWVW ++G+  D     T P I+    +++  +  P    ++LPK   PEVAF GRSN GKSTL+G L+ N+KLVR SK PGCT+TVN+F +       +  +V    +Y+VDLPGYGFA+   + V+ WT  V  ++  R   +L+RTFVL+D RHG++  DE M+++LD+  V  Q+VLTK D++T  D+   +E V RA   H +  PVVH VSA  G G+ +  +T++ +T
Sbjct:    3 TKSPWVWTMKGMDADSAVHRTDPDIARGCRAMQAGFFPPNLFKFDLPKAGVPEVAFCGRSNVGKSTLVGTLINNTKLVRASKEPGCTRTVNYFGLTAPTRIKKGSEVDRAAVYMVDLPGYGFAKAPVQEVQAWTAAVEGFIVNRDCALLRRTFVLIDGRHGVKQHDEDMMTLLDDHGVSYQIVLTKADQLTKRDIAVVVEGVMRAAARHAACYPVVHVVSARDGHGVLQLLDTIYYVT 240          
BLAST of mRNA_H-elongata_contig60837.13623.1 vs. uniprot
Match: A0A1I7NU75_9HYPH (Probable GTP-binding protein EngB n=4 Tax=Hyphomicrobium TaxID=81 RepID=A0A1I7NU75_9HYPH)

HSP 1 Score: 172 bits (437), Expect = 3.330e-50
Identity = 89/188 (47.34%), Postives = 119/188 (63.30%), Query Frame = 0
Query:   58 LPKCRQPEVAFAGRSNAGKSTLIGQLVGNSKLVRTSKAPGCTKTVNFFTVRDGDVPHLDLYLVDLPGYGFARQNKRAVREWTKIVHNYLDGRPRVVLQRTFVLVDSRHGIQPGDEHMLSVLDNAQVPNQVVLTKVDKVTPHDLVRSIESVCRAIVVHPSSVPVVHCVSAHKGLGMEEFTNTVWNLTKA 245
            LP   +PE+AFAGRSN GKS+LI  LVG  +L R S  PG T+ +NFFT      P  DL+LVD+PGYGFA   K  V  W K++  YL GR    L R F+L+D+RHG++P D+ +L +LD A V  QVVLTK DK+ P DL + +E   +A+  HP++ P +   S+ KGLG EE   T+  L ++
Sbjct:   35 LPPDDRPEIAFAGRSNVGKSSLINALVGQLRLARASNTPGRTQELNFFTD-----PERDLFLVDMPGYGFAEAPKEKVAAWNKVIRAYLAGRR--TLLRVFLLIDARHGLKPPDDEILDLLDGAAVSYQVVLTKADKIKPTDLEKVMERTLKALAKHPAAFPAIIATSSEKGLGFEELRGTIAQLLES 215          
BLAST of mRNA_H-elongata_contig60837.13623.1 vs. uniprot
Match: A0A2U1W0M8_9PROT (Probable GTP-binding protein EngB n=1 Tax=Azospirillum sp. TSO22-1 TaxID=716789 RepID=A0A2U1W0M8_9PROT)

HSP 1 Score: 164 bits (415), Expect = 7.660e-47
Identity = 90/198 (45.45%), Postives = 121/198 (61.11%), Query Frame = 0
Query:   47 EYVTPASLGYELPKCRQPEVAFAGRSNAGKSTLIGQLVGNSKLVRTSKAPGCTKTVNFFTVRDGDVPHLDLYLVDLPGYGFARQNKRAVREWTKIVHNYLDGRPRVVLQRTFVLVDSRHGIQPGDEHMLSVLDNAQVPNQVVLTKVDKVTPHDLVRSIESVCRAIVVHPSSVPVVHCVSAHKGLGMEEFTNTVWNLTK 244
            ++V  A    +LP+   PEVAFAGRSN GKS+LI  L G   L RTS  PG T+ +NFF +         L LVD+PGYG+A++ K  V  W  +V  +L G  RVVL+R  VL+DSRHG++P D+ +L++LD A VP Q+VLTK DKV P  L         A+  HP++ P VH  S+ KGLG+ E   ++  LT+
Sbjct:   32 DFVWGADALSQLPEATLPEVAFAGRSNVGKSSLINALTGRRTLARTSNTPGRTQQLNFFDLGGR------LRLVDMPGYGYAKEAKDKVEAWNTLVRRFLKG--RVVLRRALVLIDSRHGLKPNDQEILTMLDQAAVPYQIVLTKADKVKPQALENIRIQTLAALKKHPAAFPEVHVTSSDKGLGIAELRASLAKLTE 221          
BLAST of mRNA_H-elongata_contig60837.13623.1 vs. uniprot
Match: UPI0020121EBD (ribosome biogenesis GTP-binding protein YihA/YsxC n=1 Tax=Emcibacteraceae bacterium Y4 TaxID=2857064 RepID=UPI0020121EBD)

HSP 1 Score: 164 bits (414), Expect = 9.910e-47
Identity = 88/196 (44.90%), Postives = 128/196 (65.31%), Query Frame = 0
Query:   47 EYVTPASLGYELPKCRQPEVAFAGRSNAGKSTLIGQLVGNSKLVRTSKAPGCTKTVNFFTVRDGDVPHLDLYLVDLPGYGFARQNKRAVREWTKIVHNYLDGRPRVVLQRTFVLVDSRHGIQPGDEHMLSVLDNAQVPNQVVLTKVDKVTPHDLVRSIESVCRAIVVHPSSVPVVHCVSAHKGLGMEEFTNTVWNL 242
            E++  A+   +LP+    EVAFAGRSN GKS+++  L G S L RTS  PG T+ +NFF +  G+   L LY+VDLPGYG+A+ +K+ V++W K++ +YL GRP   L+R FVLVDSRHG++  D+ ++S+LD   V  QVVLTK DKV P +  + I+   +AI  + ++ P V   S+ KG G+EE    + +L
Sbjct:   27 EFLLGAASLTQLPEPNATEVAFAGRSNVGKSSILNALTGRSNLARTSNTPGRTQQLNFFFL--GNRSKLGLYVVDLPGYGYAKVSKKLVKDWVKLMRSYLRGRPN--LRRVFVLVDSRHGLKDSDKELMSMLDETAVSYQVVLTKCDKVKPSEQEKLIKKTEKAIAKNVAAHPEVLITSSVKGYGLEELRGVIADL 218          
BLAST of mRNA_H-elongata_contig60837.13623.1 vs. uniprot
Match: A0A2D4VJ02_9HYPH (Probable GTP-binding protein EngB n=2 Tax=Parvibaculum TaxID=256616 RepID=A0A2D4VJ02_9HYPH)

HSP 1 Score: 162 bits (411), Expect = 1.140e-46
Identity = 84/172 (48.84%), Postives = 111/172 (64.53%), Query Frame = 0
Query:   64 PEVAFAGRSNAGKSTLIGQLVGNSKLVRTSKAPGCTKTVNFFTVRDGDVPHLDLYLVDLPGYGFARQNKRAVREWTKIVHNYLDGRPRVVLQRTFVLVDSRHGIQPGDEHMLSVLDNAQVPNQVVLTKVDKVTPHDLVRSIESVCRAIVVHPSSVPVVHCVSAHKGLGMEEF 235
            PE AFAGRSN GKS+L+  L G   L RTS  PG TK +NFF +  G      L LVDLPGYG+AR+ K  V +WT ++ +YL GRP   L+R FVLVDSRHG++  D  ++S+LD   V  Q+VLTK+DK+  ++L   IE +   +  HP+S PV+H  S+ KG G+ E 
Sbjct:    2 PEGAFAGRSNVGKSSLVNALTGRKTLARTSNTPGRTKELNFFAL--GPAAGAALILVDLPGYGYARETKSRVAQWTALIIDYLRGRPE--LRRVFVLVDSRHGLKDSDRDVMSMLDEVAVSYQIVLTKIDKLKKNELESRIEEIRAELKKHPASHPVIHATSSEKGTGIAEL 169          
BLAST of mRNA_H-elongata_contig60837.13623.1 vs. uniprot
Match: F8JH41_HYPSM (Probable GTP-binding protein EngB n=2 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=F8JH41_HYPSM)

HSP 1 Score: 163 bits (412), Expect = 1.920e-46
Identity = 88/185 (47.57%), Postives = 117/185 (63.24%), Query Frame = 0
Query:   58 LPKCRQPEVAFAGRSNAGKSTLIGQLVGNSKLVRTSKAPGCTKTVNFFTVRDGDVPHLDLYLVDLPGYGFARQNKRAVREWTKIVHNYLDGRPRVVLQRTFVLVDSRHGIQPGDEHMLSVLDNAQVPNQVVLTKVDKVTPHDLVRSIESVCRAIVVHPSSVPVVHCVSAHKGLGMEEFTNTVWNL 242
            LP   +PE+AFAGRSN GKS+LI  LVG  +L R S  PG T+ +NFFT      P+ +LYLVD+PGYGFA   K  V  W K++  YL GR    L R F+LVD+RHG++P D+ ++++LD A V  QVVLTKVDK++  DL +  E    A+  HP++ P +   S+ K LG EE   T+  L
Sbjct:   35 LPPDDRPEIAFAGRSNVGKSSLINALVGQLRLARASNTPGRTQDLNFFTE-----PNDELYLVDMPGYGFAEAPKDKVAAWNKVLRAYLAGRR--TLLRVFLLVDARHGLKPVDDEIMALLDGAAVSYQVVLTKVDKISKTDLEKVAERTQEALAKHPAAFPQLILTSSEKALGFEELRGTIAQL 212          
BLAST of mRNA_H-elongata_contig60837.13623.1 vs. uniprot
Match: UPI001B3BABB1 (ribosome biogenesis GTP-binding protein YihA/YsxC n=1 Tax=Azospirillum sp. SYSU D00513 TaxID=2812561 RepID=UPI001B3BABB1)

HSP 1 Score: 162 bits (410), Expect = 3.620e-46
Identity = 87/193 (45.08%), Postives = 123/193 (63.73%), Query Frame = 0
Query:   57 ELPKCRQPEVAFAGRSNAGKSTLIGQLVGNSKLVRTSKAPGCTKTVNFFTVRDGDVPHLDLYLVDLPGYGFARQNKRAVREWTKIVHNYLDGRPRVVLQRTFVLVDSRHGIQPGDEHMLSVLDNAQVPNQVVLTKVDKVTPHDLVRSIESVCRAIVVHPSSVPVVHCVSAHKGLGMEEFTNTVWNLTKAPRAQ 249
            +LP+  QPE+AFAGRSN GKS+LI  L   + L RTS  PG T+ +NFF + D       L +VD+PGYG+A+++K  V  WT++V +YL G  RV L+R  VL+DSRHG +P D  ++++LD A VP QVVLTK DKV   +L   ++     +  HP++ P VH  S+  GLG+ E   ++  L  AP+A+
Sbjct:   32 QLPEEAQPEIAFAGRSNVGKSSLINALTRRNTLARTSNTPGRTQQLNFFNLGDR------LTIVDMPGYGYAKESKEKVAAWTEMVRSYLKG--RVTLRRALVLIDSRHGTKPHDHEVMTMLDKAAVPYQVVLTKADKVKDKELQAMLDRTVAEMKKHPAAFPEVHLTSSETGLGIAELRASLAALA-APKAE 215          
BLAST of mRNA_H-elongata_contig60837.13623.1 vs. uniprot
Match: A0A482SLS6_9ARCH (Probable GTP-binding protein EngB n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SLS6_9ARCH)

HSP 1 Score: 163 bits (413), Expect = 6.870e-46
Identity = 86/198 (43.43%), Postives = 129/198 (65.15%), Query Frame = 0
Query:   43 SLRGEYVTPASLGYELPKCRQPEVAFAGRSNAGKSTLIGQLVGNSKLVRTSKAPGCTKTVNFFTVRDGDVPHLD---LYLVDLPGYGFARQNKRAVREWTKIVHNYLDGRPRVVLQRTFVLVDSRHGIQPGDEHMLSVLDNAQVPNQVVLTKVDKVTPHDLVRSIESVCRAIV--VHPSSVPVVHCVSAHKGLGMEEF 235
            SL   Y+ P+   ++LP   +PEVAF GRSN GKS+L+  L+G   L+R SK PGCT T+N++ +  G    LD    YL+D+PGYGFA+  K+  ++W +IV++YL  R +++L+R FVL+DSR G+Q  D  M+ +L++A +P QVVLTK D V+  ++   +  +   I    + S +P+VH VSA KGLG+E+ 
Sbjct:   70 SLNPTYIPPSYFNHQLPSAGRPEVAFVGRSNVGKSSLVEALLGTKGLLRISKEPGCTTTLNYYALAKGSA--LDDHACYLIDMPGYGFAKIAKQQQKKWLEIVNSYLMNRDQLLLRRVFVLIDSRRGVQMQDVEMMEMLNHAHIPYQVVLTKKDLVSDKEIKEKLFELFCVISRKKNNSCLPLVHVVSALKGLGLEDL 265          
BLAST of mRNA_H-elongata_contig60837.13623.1 vs. uniprot
Match: A0A2W4KWF0_9PROT (Probable GTP-binding protein EngB n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4KWF0_9PROT)

HSP 1 Score: 161 bits (407), Expect = 1.410e-45
Identity = 86/185 (46.49%), Postives = 114/185 (61.62%), Query Frame = 0
Query:   58 LPKCRQPEVAFAGRSNAGKSTLIGQLVGNSKLVRTSKAPGCTKTVNFFTVRDGDVPHLDLYLVDLPGYGFARQNKRAVREWTKIVHNYLDGRPRVVLQRTFVLVDSRHGIQPGDEHMLSVLDNAQVPNQVVLTKVDKVTPHDLVRSIESVCRAIVVHPSSVPVVHCVSAHKGLGMEEFTNTVWNL 242
            LP   +PE+AFAGRSN GKS+LI  LVG + L RTS  PG T+ +NFF   +     + LYLVD+PGYGFA+  K  V+ WT++V NYL GRP   L+R F+L+DSRHGI+  D  ++ +LD A V  Q+VLTK DK     L   I +    I  HP++ P +   SA KG G++    T+  L
Sbjct:   45 LPDADRPEIAFAGRSNVGKSSLINALVGQNGLARTSNTPGRTQELNFFATAN-----VALYLVDMPGYGFAQAPKEKVKAWTELVRNYLRGRP--TLKRVFLLIDSRHGIKSNDREIMEMLDEAAVSYQIVLTKADKPNLRQLRSVITATYETIASHPAAYPEILVTSAEKGQGIDVLRATIAEL 222          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60837.13623.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KI28_9PHAE4.830e-9759.68EngB-type G domain-containing protein n=2 Tax=Ecto... [more]
A0A835YYM3_9STRA5.750e-6042.86YihA2, YihA/EngB-like GTPase n=1 Tax=Tribonema min... [more]
A0A1I7NU75_9HYPH3.330e-5047.34Probable GTP-binding protein EngB n=4 Tax=Hyphomic... [more]
A0A2U1W0M8_9PROT7.660e-4745.45Probable GTP-binding protein EngB n=1 Tax=Azospiri... [more]
UPI0020121EBD9.910e-4744.90ribosome biogenesis GTP-binding protein YihA/YsxC ... [more]
A0A2D4VJ02_9HYPH1.140e-4648.84Probable GTP-binding protein EngB n=2 Tax=Parvibac... [more]
F8JH41_HYPSM1.920e-4647.57Probable GTP-binding protein EngB n=2 Tax=unclassi... [more]
UPI001B3BABB13.620e-4645.08ribosome biogenesis GTP-binding protein YihA/YsxC ... [more]
A0A482SLS6_9ARCH6.870e-4643.43Probable GTP-binding protein EngB n=1 Tax=archaeon... [more]
A0A2W4KWF0_9PROT1.410e-4546.49Probable GTP-binding protein EngB n=1 Tax=Proteoba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 46..248
e-value: 9.6E-45
score: 154.5
NoneNo IPR availablePANTHERPTHR11649:SF13GTP-BINDING PROTEIN ENGB-RELATEDcoord: 47..239
NoneNo IPR availablePANTHERPTHR11649MSS1/TRME-RELATED GTP-BINDING PROTEINcoord: 47..239
IPR019987GTP-binding protein, ribosome biogenesis, YsxCTIGRFAMTIGR03598TIGR03598coord: 48..238
e-value: 2.4E-51
score: 172.0
IPR019987GTP-binding protein, ribosome biogenesis, YsxCHAMAPMF_00321GTPase_EngBcoord: 50..243
score: 22.549
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 65..191
e-value: 3.7E-18
score: 65.7
IPR030393EngB-type guanine nucleotide-binding (G) domainPROSITEPS51706G_ENGBcoord: 62..245
score: 38.119
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 60..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig60837contigH-elongata_contig60837:2022..2771 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig60837.13623.1mRNA_H-elongata_contig60837.13623.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig60837 1510..2936 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig60837.13623.1 ID=prot_H-elongata_contig60837.13623.1|Name=mRNA_H-elongata_contig60837.13623.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=250bp
MRSLEVLRRLHGQLAVATRSPWVWVVQGVHPDTVPPISHPRPSLRGEYVT
PASLGYELPKCRQPEVAFAGRSNAGKSTLIGQLVGNSKLVRTSKAPGCTK
TVNFFTVRDGDVPHLDLYLVDLPGYGFARQNKRAVREWTKIVHNYLDGRP
RVVLQRTFVLVDSRHGIQPGDEHMLSVLDNAQVPNQVVLTKVDKVTPHDL
VRSIESVCRAIVVHPSSVPVVHCVSAHKGLGMEEFTNTVWNLTKAPRAQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019987GTP-bd_ribosome_bio_YsxC
IPR006073GTP_binding_domain
IPR030393G_ENGB_dom
IPR027417P-loop_NTPase