prot_H-elongata_contig60625.13603.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig60625.13603.1
Unique Nameprot_H-elongata_contig60625.13603.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length37
Homology
BLAST of mRNA_H-elongata_contig60625.13603.1 vs. uniprot
Match: D8LTN8_ECTSI (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTN8_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 4.400e-15
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0
Query:    1 QIWIKTLTGRKQQYSFEPDNMVSMVKQALQEKEGIQ 36
            QIWIKTLTGRKQQYSFEPDN VSMVKQ+LQEKEGIQ
Sbjct:    2 QIWIKTLTGRKQQYSFEPDNQVSMVKQSLQEKEGIQ 37          
BLAST of mRNA_H-elongata_contig60625.13603.1 vs. uniprot
Match: A0A836CG90_9STRA (Ubiquitin-related domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG90_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.940e-11
Identity = 29/36 (80.56%), Postives = 33/36 (91.67%), Query Frame = 0
Query:    1 QIWIKTLTGRKQQYSFEPDNMVSMVKQALQEKEGIQ 36
            QIWIKTLTGRKQQ++FEP + V +VKQALQEKEGIQ
Sbjct:    2 QIWIKTLTGRKQQFNFEPSDQVLLVKQALQEKEGIQ 37          
BLAST of mRNA_H-elongata_contig60625.13603.1 vs. uniprot
Match: B8BQ41_THAPS (Ubiquitin-like domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQ41_THAPS)

HSP 1 Score: 56.6 bits (135), Expect = 1.400e-9
Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 0
Query:    1 QIWIKTLTGRKQQYSFEPDNMVSMVKQALQEKEGIQ 36
            QI+IKTLTGRKQ ++FEP+N V  VKQALQEKEGIQ
Sbjct:    1 QIFIKTLTGRKQAFNFEPENQVLAVKQALQEKEGIQ 36          
BLAST of mRNA_H-elongata_contig60625.13603.1 vs. uniprot
Match: M4BXH5_HYAAE (Ubiquitin-like domain-containing protein n=25 Tax=Oomycota TaxID=4762 RepID=M4BXH5_HYAAE)

HSP 1 Score: 55.8 bits (133), Expect = 2.630e-9
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0
Query:    1 QIWIKTLTGRKQQYSFEPDNMVSMVKQALQEKEGIQ 36
            QI IKTLTGRKQ ++FEPDN +  VKQALQEKEGIQ
Sbjct:    2 QIQIKTLTGRKQTFNFEPDNTILHVKQALQEKEGIQ 37          
BLAST of mRNA_H-elongata_contig60625.13603.1 vs. uniprot
Match: A0A7S1V0J3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V0J3_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 2.810e-9
Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 0
Query:    1 QIWIKTLTGRKQQYSFEPDNMVSMVKQALQEKEGIQ 36
            QI+IKTLTGRKQ ++FEP+N V  VKQALQEKEGIQ
Sbjct:   34 QIFIKTLTGRKQAFNFEPENQVLAVKQALQEKEGIQ 69          
BLAST of mRNA_H-elongata_contig60625.13603.1 vs. uniprot
Match: A0A0G4F771_VITBC (Ubiquitin-like domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F771_VITBC)

HSP 1 Score: 55.5 bits (132), Expect = 3.820e-9
Identity = 27/35 (77.14%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    1 QIWIKTLTGRKQQYSFEPDNMVSMVKQALQEKEGI 35
            QI IKTLTGRKQ ++FEPDN +  VKQALQEKEGI
Sbjct:    2 QILIKTLTGRKQNFNFEPDNTILQVKQALQEKEGI 36          
BLAST of mRNA_H-elongata_contig60625.13603.1 vs. uniprot
Match: A0A7S3L110_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L110_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 5.130e-9
Identity = 27/36 (75.00%), Postives = 32/36 (88.89%), Query Frame = 0
Query:    1 QIWIKTLTGRKQQYSFEPDNMVSMVKQALQEKEGIQ 36
            QI+IKTLTGRKQ ++FEP+N V  +KQALQEKEGIQ
Sbjct:   47 QIFIKTLTGRKQAFNFEPENQVLAIKQALQEKEGIQ 82          
BLAST of mRNA_H-elongata_contig60625.13603.1 vs. uniprot
Match: A0A125YX02_TOXGV (Ubiquitin family protein n=16 Tax=Sarcocystidae TaxID=5809 RepID=A0A125YX02_TOXGV)

HSP 1 Score: 55.1 bits (131), Expect = 5.300e-9
Identity = 28/35 (80.00%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    1 QIWIKTLTGRKQQYSFEPDNMVSMVKQALQEKEGI 35
            QI IKTLTGRKQ ++FEPDN V  VKQALQEKEGI
Sbjct:    2 QILIKTLTGRKQSFNFEPDNTVLHVKQALQEKEGI 36          
BLAST of mRNA_H-elongata_contig60625.13603.1 vs. uniprot
Match: A0A7S2KTK1_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2KTK1_9DINO)

HSP 1 Score: 55.5 bits (132), Expect = 6.240e-9
Identity = 27/36 (75.00%), Postives = 31/36 (86.11%), Query Frame = 0
Query:    1 QIWIKTLTGRKQQYSFEPDNMVSMVKQALQEKEGIQ 36
            QI+IKTLTGRK  ++FEPDN V  VK+ALQEKEGIQ
Sbjct:   26 QIFIKTLTGRKTNFNFEPDNTVRQVKEALQEKEGIQ 61          
BLAST of mRNA_H-elongata_contig60625.13603.1 vs. uniprot
Match: A0A1R2CSB4_9CILI (Ubiquitin-like domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CSB4_9CILI)

HSP 1 Score: 54.3 bits (129), Expect = 9.940e-9
Identity = 27/35 (77.14%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    1 QIWIKTLTGRKQQYSFEPDNMVSMVKQALQEKEGI 35
            QI +KTLTG+KQ  +FEPDN VS VKQALQEKEGI
Sbjct:    2 QIIVKTLTGKKQPMNFEPDNTVSQVKQALQEKEGI 36          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60625.13603.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTN8_ECTSI4.400e-1594.44Ubiquitin-like domain-containing protein n=2 Tax=E... [more]
A0A836CG90_9STRA1.940e-1180.56Ubiquitin-related domain-containing protein n=1 Ta... [more]
B8BQ41_THAPS1.400e-977.78Ubiquitin-like domain-containing protein (Fragment... [more]
M4BXH5_HYAAE2.630e-977.78Ubiquitin-like domain-containing protein n=25 Tax=... [more]
A0A7S1V0J3_9STRA2.810e-977.78Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A0G4F771_VITBC3.820e-977.14Ubiquitin-like domain-containing protein n=1 Tax=V... [more]
A0A7S3L110_9STRA5.130e-975.00Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A125YX02_TOXGV5.300e-980.00Ubiquitin family protein n=16 Tax=Sarcocystidae Ta... [more]
A0A7S2KTK1_9DINO6.240e-975.00Hypothetical protein n=1 Tax=Brandtodinium nutricu... [more]
A0A1R2CSB4_9CILI9.940e-977.14Ubiquitin-like domain-containing protein n=1 Tax=S... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 1..37
e-value: 8.3E-9
score: 37.1
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 1..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig60625contigH-elongata_contig60625:2095..2495 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig60625.13603.1mRNA_H-elongata_contig60625.13603.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig60625 2094..2495 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig60625.13603.1 ID=prot_H-elongata_contig60625.13603.1|Name=mRNA_H-elongata_contig60625.13603.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=37bp
QIWIKTLTGRKQQYSFEPDNMVSMVKQALQEKEGIQA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-like_domsf