prot_H-elongata_contig60471.13589.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig60471.13589.1
Unique Nameprot_H-elongata_contig60471.13589.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length186
Homology
BLAST of mRNA_H-elongata_contig60471.13589.1 vs. uniprot
Match: A0A6H5JTQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTQ1_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 3.090e-74
Identity = 129/186 (69.35%), Postives = 148/186 (79.57%), Query Frame = 0
Query:    1 TIGRAKIEEWGSREGGFSEEFLRRVSGERDLSAVRALSFEVDTTVTQVDHLGTLMPCLTELRLKRGSTLSSFRDLGSSLIQLRVLWLSACGVRHLDGIEALTGLEELYLAFNDVDDLTSIALHDNLKVLDLESNNVRDADQVVHLGTCPSLWSLTLAANPVCRDKHYRRCVVNIVPQLISLDEEDI 186
            T G  ++ E G    G SE  LR ++GE DL  VR L+  VDT  TQVDHLG ++P L+ELRL+RGS L+SFRDLGSSL  LRVLWLSACGVRHLDG+ ALTGLEELYLAFNDV+DLTSIALHD L+VLDLESN V+DA+Q +HLGTC  LWSLTL ANPVCRD HYRR +V  VPQL SLDE+D+
Sbjct:    7 TKGAVRVAEAGD---GCSEASLRIITGEEDLRDVRHLALAVDTNTTQVDHLGIVLPLLSELRLERGSVLASFRDLGSSLPNLRVLWLSACGVRHLDGVGALTGLEELYLAFNDVEDLTSIALHDRLEVLDLESNCVKDAEQAIHLGTCSHLWSLTLTANPVCRDLHYRRRMVEAVPQLASLDEKDV 189          
BLAST of mRNA_H-elongata_contig60471.13589.1 vs. uniprot
Match: D8LM99_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM99_ECTSI)

HSP 1 Score: 249 bits (636), Expect = 9.070e-74
Identity = 128/186 (68.82%), Postives = 149/186 (80.11%), Query Frame = 0
Query:    1 TIGRAKIEEWGSREGGFSEEFLRRVSGERDLSAVRALSFEVDTTVTQVDHLGTLMPCLTELRLKRGSTLSSFRDLGSSLIQLRVLWLSACGVRHLDGIEALTGLEELYLAFNDVDDLTSIALHDNLKVLDLESNNVRDADQVVHLGTCPSLWSLTLAANPVCRDKHYRRCVVNIVPQLISLDEEDI 186
            T G  ++EE G      SE  LRR++GE DL  VR L+  VDT  TQVDHLGT++P LTELRL+RGS L+SFRDLGSSL  LRVLWLSACGV HLDG+ ALTGLEELYLAFNDV+DLTSIALHD L+VLDLESN ++DA+Q +HLGTC  LWSLTL ANP+CRD +YRR +V  VPQL SLDE+D+
Sbjct:    7 TKGAVRVEEPGDE---CSEASLRRITGEEDLRDVRHLALAVDTKTTQVDHLGTVLPLLTELRLERGSVLASFRDLGSSLPNLRVLWLSACGVCHLDGVGALTGLEELYLAFNDVEDLTSIALHDRLEVLDLESNCLKDAEQAIHLGTCSRLWSLTLTANPLCRDHNYRRRMVEAVPQLASLDEKDV 189          
BLAST of mRNA_H-elongata_contig60471.13589.1 vs. uniprot
Match: A0A5D6YP06_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YP06_9STRA)

HSP 1 Score: 160 bits (405), Expect = 2.920e-42
Identity = 79/170 (46.47%), Postives = 117/170 (68.82%), Query Frame = 0
Query:   17 FSEEFLRRVSGERDLSAVRALSFEVDTTVTQVDHLGTLMPCLTELRLKRGSTLSSFRDLGSSLIQLRVLWLSACGVRHLDGIEALTGLEELYLAFNDVDDLTSIALHDNLKVLDLESNNVRDADQVVHLGTCPSLWSLTLAANPVCRDKHYRRCVVNIVPQLISLDEEDI 186
             +E+ L+++SG++DL+ V  L   VD+    V+ +G L+P L +L+L+  STL SFRDLG+SL  L++LW+   G+  LDGI ALTGL+ELYL +ND+ DL+ + LH+ ++V+DLE N + D  QV  L  C  L +L L ANPVCR  HYR+ + N +PQL +LD++ +
Sbjct:   99 ITEDKLQKLSGKQDLARVTYLQISVDSGKQSVEAIGELLPSLQQLKLQN-STLHSFRDLGTSLHSLQILWVIRSGISDLDGIGALTGLQELYLQYNDISDLSPLTLHEEIQVIDLEGNCIEDIGQVEQLAFCAQLTTLNLEANPVCRIAHYRQIIANFLPQLTTLDDKPV 267          
BLAST of mRNA_H-elongata_contig60471.13589.1 vs. uniprot
Match: A0A1V9YPU2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YPU2_9STRA)

HSP 1 Score: 156 bits (395), Expect = 8.160e-41
Identity = 82/172 (47.67%), Postives = 115/172 (66.86%), Query Frame = 0
Query:   15 GGFSEEFLRRVSGERDLSAVRALSFEVDTTVTQVDHLGTLMPCLTELRLKRGSTLSSFRDLGSSLIQLRVLWLSACGVRHLDGIEALTGLEELYLAFNDVDDLTSIALHDNLKVLDLESNNVRDADQVVHLGTCPSLWSLTLAANPVCRDKHYRRCVVNIVPQLISLDEEDI 186
            G  +++ LR++SG++DL+ V  L   +DT    V+ LG L+P L +L+L + S L SFRDLG+SL  L+VLW+   GV+ LDGI ALTGL ELYL  N++ D++ +++HD L ++DLE+N V D  Q+  LG CP L +L L  NPV R   YR  VVN +P L SLD++ I
Sbjct:  671 GDLTQDKLRQISGKQDLAKVTCLEMTIDTVKQSVEALGELLPSLLQLKLHQ-SVLHSFRDLGTSLHSLQVLWVECSGVKDLDGIGALTGLRELYLKGNEIVDISPLSMHDELSIVDLENNQVFDIIQIEQLGLCPQLSALKLLGNPVARIPQYRPIVVNYIPHLKSLDDKAI 841          
BLAST of mRNA_H-elongata_contig60471.13589.1 vs. uniprot
Match: W4G0V7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G0V7_9STRA)

HSP 1 Score: 154 bits (390), Expect = 2.360e-40
Identity = 83/166 (50.00%), Postives = 113/166 (68.07%), Query Frame = 0
Query:   17 FSEEFLRRVSGERDLSAVRALSFEVDTTVTQVDHLGTLMPCLTELRLKRGSTLSSFRDLGSSLIQLRVLWLSACGVRHLDGIEALTGLEELYLAFNDVDDLTSIALHDNLKVLDLESNNVRDADQVVHLGTCPSLWSLTLAANPVCRDKHYRRCVVNIVPQLISLD 182
             ++E LR++SG++DL+ V  L   VDT    V+ LG L+P L++LRL + S L SFRDLG+SL  L++LWL + GV+ LDGI ALTGL ELYL FND+ D++ ++LHD L +LDL+ N V+D  Q+  LG C  L  L LAANPV    +YR    + +PQL +LD
Sbjct:   64 ITDEKLRQISGKQDLNRVTYLQLTVDTHKQSVEALGELLPSLSQLRLHQ-SVLHSFRDLGTSLHGLQILWLMSSGVKDLDGIGALTGLRELYLQFNDIVDVSPLSLHDELHILDLQGNRVQDIVQIEQLGMCVQLTVLNLAANPVAAIPNYRPIACSYIPQLQTLD 228          
BLAST of mRNA_H-elongata_contig60471.13589.1 vs. uniprot
Match: A0A1V9ZB88_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZB88_9STRA)

HSP 1 Score: 153 bits (386), Expect = 7.070e-40
Identity = 83/172 (48.26%), Postives = 110/172 (63.95%), Query Frame = 0
Query:   15 GGFSEEFLRRVSGERDLSAVRALSFEVDTTVTQVDHLGTLMPCLTELRLKRGSTLSSFRDLGSSLIQLRVLWLSACGVRHLDGIEALTGLEELYLAFNDVDDLTSIALHDNLKVLDLESNNVRDADQVVHLGTCPSLWSLTLAANPVCRDKHYRRCVVNIVPQLISLDEEDI 186
            G  + + LR++SG++DL+ V  L   VDT    V+ LG L+P L +LRL   S L SFRDLG+SL  L+VLWL +CGV  LDGI ALTGL ELYL  N + D++ +++HD L V+DLE N V D  Q+  LG CP L +L L  NPV     YR  V + +P L SLD++ +
Sbjct:   67 GDLTHDKLRQLSGKQDLTKVTFLQLTVDTAKQSVEALGELLPSLLQLRLHE-SHLHSFRDLGTSLHSLQVLWLQSCGVTDLDGIGALTGLRELYLQHNAIADISPLSMHDELAVVDLEGNAVLDIVQIEQLGLCPQLSALKLQGNPVAAIPQYRSIVASYIPHLASLDDKPV 237          
BLAST of mRNA_H-elongata_contig60471.13589.1 vs. uniprot
Match: A0A8B6BI57_MYTGA (Uncharacterized protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6BI57_MYTGA)

HSP 1 Score: 150 bits (379), Expect = 4.270e-39
Identity = 77/172 (44.77%), Postives = 114/172 (66.28%), Query Frame = 0
Query:   22 LRRVSGERDLSAVRALSFEVDTTVTQVDHLGTLMPCLTELRLKRGSTLSSFRDLGSSLIQLRVLWLSACGVRHLDGIEALTGLEELYLAFNDVDDLTSIALHDNLKVLDLESNNVRDADQVVHLGTCPSLWSLTLAANPVC---------RDKHYRRCVVNIVPQLISLDEE 184
            L+ ++G ++L  VR+L  +VDT+ T + + G+L+PCLT+L+L   S +   RDLGSSL  +++LW+S CG+  LDGI ++  L E+YL++N++ D++ I++ DNL++LDLE NNV D  QV  LG C  L  LTL +NPVC          D  YR+ V  +VPQL  LD+E
Sbjct:   65 LKSLTGIQNLDDVRSLELKVDTSDTSLGNFGSLLPCLTQLKLSN-SCIPYIRDLGSSLRTIQILWMSRCGLLELDGISSMISLTEVYLSYNEISDISPISMLDNLQILDLEGNNVEDISQVQFLGMCTQLNRLTLESNPVCVAPSPDSEQEDYDYRQAVKKVVPQLCYLDDE 235          
BLAST of mRNA_H-elongata_contig60471.13589.1 vs. uniprot
Match: T0SCL0_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0SCL0_SAPDV)

HSP 1 Score: 150 bits (380), Expect = 4.700e-39
Identity = 81/172 (47.09%), Postives = 109/172 (63.37%), Query Frame = 0
Query:   15 GGFSEEFLRRVSGERDLSAVRALSFEVDTTVTQVDHLGTLMPCLTELRLKRGSTLSSFRDLGSSLIQLRVLWLSACGVRHLDGIEALTGLEELYLAFNDVDDLTSIALHDNLKVLDLESNNVRDADQVVHLGTCPSLWSLTLAANPVCRDKHYRRCVVNIVPQLISLDEEDI 186
            G  + + LR++SG+ DL+ V  L   +DT    V+ LG L+P L +LRL   S L SFRDLG+SL  L+VLWL  CGV  LDGI ALTGL ELYL  N + D++ +++HD L V+DL+ N V D  Q+  LG CP L +L L  NPV     YR  V++ +P L +LD++ I
Sbjct:   65 GDLTHDKLRQLSGKSDLTKVTFLQLSIDTGKQSVEALGELLPSLLQLRLHE-SKLHSFRDLGTSLHSLQVLWLERCGVTDLDGIGALTGLRELYLNGNCISDISPLSMHDELSVVDLQGNAVMDIVQIEQLGLCPQLTALKLVENPVASIPQYRAIVISYIPHLTALDDKPI 235          
BLAST of mRNA_H-elongata_contig60471.13589.1 vs. uniprot
Match: A0A485KIX1_9STRA (Aste57867_7880 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KIX1_9STRA)

HSP 1 Score: 148 bits (373), Expect = 4.080e-38
Identity = 85/183 (46.45%), Postives = 112/183 (61.20%), Query Frame = 0
Query:   17 FSEEFLRRVSGERDLSAVRALSFEVDTTVTQVDHLGTLMPCLTELRLKRGSTLSSFRDLGSSLIQLRVLWLSACGVRHLDGIEALTGLEELYLAFNDVDDLTSIALHDNLKVLDLESNNVRDADQV-------------VHLGTCPSLWSLTLAANPVCRDKHYRRCVVNIVPQLISLDEEDI 186
             +EE LR++SG++DL+ V  L   VDT    V+ LG L+P +T+LRL + S L SFRDLG+SL  L+VLWL   GV+ LDGI ALTGL ELYL FN++ D++ +++HD L V+DL+ N V D  Q+              H G CP L SL LA NPV     YR  V + +P L  LDE  +
Sbjct:   61 ITEEKLRQISGKQDLNKVNYLQLTVDTQKQSVEALGELLPSMTQLRLHQ-SILHSFRDLGTSLHGLQVLWLMRSGVKDLDGIGALTGLRELYLQFNEIADISPLSMHDELHVIDLQGNCVEDIVQLEQLGRSIQVLSTNYHSGLCPHLASLNLADNPVASIPQYRPIVCSYIPHLEKLDERAV 242          
BLAST of mRNA_H-elongata_contig60471.13589.1 vs. uniprot
Match: A0A7S0T6A7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0T6A7_9CHLO)

HSP 1 Score: 138 bits (347), Expect = 4.810e-37
Identity = 73/170 (42.94%), Postives = 105/170 (61.76%), Query Frame = 0
Query:   17 FSEEFLRRVSGERDLSAVRALSFEVDTTVTQVDHLGTLMPCLTELRLKRGSTLSSFRDLGSSLIQLRVLWLSACGVRHLDGIEALTGLEELYLAFNDVDDLTSIALHDNLKVLDLESNNVRDADQVVHLGTCPSLWSLTLAANPVCRDKHYRRCVVNIVPQLISLDEEDI 186
            FS ++L R++G  DL++   L    DTT   +  +G  +P L +LRL   S L S R  GS+  +LRVLW++  G+  L GI +L  L+ELY AFN+V D++ +A  DNL+V+DLE+N VRD D   +LG CP L +L+L  NPV    +YRR V   +P+L  LD+  +
Sbjct:   41 FSRQYLSRLAGTDDLASCAFLEMRADTTEDDLSGVGAALPALAQLRLSN-SVLPSARSFGSTFQRLRVLWVARSGLEDLQGIASLVELKELYAAFNEVSDVSPLAELDNLQVVDLEANQVRDRDAADYLGMCPVLTTLSLEGNPVSNRMYYRRLVARAIPRLEVLDDRPV 209          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60471.13589.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JTQ1_9PHAE3.090e-7469.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LM99_ECTSI9.070e-7468.82Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A5D6YP06_9STRA2.920e-4246.47Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A1V9YPU2_9STRA8.160e-4147.67Uncharacterized protein (Fragment) n=1 Tax=Thraust... [more]
W4G0V7_9STRA2.360e-4050.00Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A1V9ZB88_9STRA7.070e-4048.26Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A8B6BI57_MYTGA4.270e-3944.77Uncharacterized protein n=1 Tax=Mytilus galloprovi... [more]
T0SCL0_SAPDV4.700e-3947.09Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A485KIX1_9STRA4.080e-3846.45Aste57867_7880 protein n=1 Tax=Aphanomyces stellat... [more]
A0A7S0T6A7_9CHLO4.810e-3742.94Hypothetical protein (Fragment) n=1 Tax=Mantoniell... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 41..186
e-value: 2.0E-29
score: 103.7
NoneNo IPR availablePFAMPF14580LRR_9coord: 65..182
e-value: 1.0E-10
score: 41.4
NoneNo IPR availablePANTHERPTHR22708:SF0LEUCINE-RICH REPEAT-CONTAINING PROTEIN 56coord: 14..184
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 48..185
IPR040091Leucine-rich repeat-containing protein 56PANTHERPTHR22708UNCHARACTERIZEDcoord: 14..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig60471contigH-elongata_contig60471:2274..3470 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig60471.13589.1mRNA_H-elongata_contig60471.13589.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig60471 2274..3470 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig60471.13589.1 ID=prot_H-elongata_contig60471.13589.1|Name=mRNA_H-elongata_contig60471.13589.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=186bp
TIGRAKIEEWGSREGGFSEEFLRRVSGERDLSAVRALSFEVDTTVTQVDH
LGTLMPCLTELRLKRGSTLSSFRDLGSSLIQLRVLWLSACGVRHLDGIEA
LTGLEELYLAFNDVDDLTSIALHDNLKVLDLESNNVRDADQVVHLGTCPS
LWSLTLAANPVCRDKHYRRCVVNIVPQLISLDEEDI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR040091LRRC56