prot_H-elongata_contig60422.13584.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig60422.13584.1
Unique Nameprot_H-elongata_contig60422.13584.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length122
Homology
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BLAST of mRNA_H-elongata_contig60422.13584.1 vs. uniprot
Match: D8LM64_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM64_ECTSI)

HSP 1 Score: 229 bits (584), Expect = 1.250e-67
Identity = 117/121 (96.69%), Postives = 121/121 (100.00%), Query Frame = 0 
Query:    1 MMTDITEREKKTLFAGSVPIGLNRNQEHVSNVLDSGKAMDRVVFQEIHSGEIFGFDSFLTGSPAYSSVVVDSEKAVVRSCTKDQIVARLREDRKLAAKFYRIAAVSIASRLAEISPLDIYL 121
            +MTD++EREKKTLFAGSVPIGLNRNQEHVSNVLDSGKAMDRVVFQEIHSGEIFGFDSFLTGSPAYSS+VVDSEKAVVRSCTKDQIVARLREDRKLAAKFYRIAAVSIASRLAEISPLDIYL
Sbjct:  941 LMTDMSEREKKTLFAGSVPIGLNRNQEHVSNVLDSGKAMDRVVFQEIHSGEIFGFDSFLTGSPAYSSIVVDSEKAVVRSCTKDQIVARLREDRKLAAKFYRIAAVSIASRLAEISPLDIYL 1061
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BLAST of mRNA_H-elongata_contig60422.13584.1 vs. uniprot
Match: A0A6H5KEB5_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB5_9PHAE)

HSP 1 Score: 210 bits (535), Expect = 5.650e-66
Identity = 117/148 (79.05%), Postives = 121/148 (81.76%), Query Frame = 0 
Query:    1 MMTDITEREKKTLFAGSVPIGLNRNQ--------------------------EHVSNVLDSGKAMDRVVFQEIHSGEIFGFDSFLTGSPAYSSVVVDSEKAVV-RSCTKDQIVARLREDRKLAAKFYRIAAVSIASRLAEISPLDIYL 121
            +MTD++EREKKTLFAGSVPIGLNRNQ                          EHVSNVLDSGKAMDRVVFQEIHSGEIFGFDSFLTGSPAYSS+VVDSEKAVV RSCTKDQIVARLREDRKLAAKFYRIAAVSIASRLAEISPLDIYL
Sbjct:  156 LMTDMSEREKKTLFAGSVPIGLNRNQVVIGELNFNDNLYLLCTGIVRVQRVKEHVSNVLDSGKAMDRVVFQEIHSGEIFGFDSFLTGSPAYSSIVVDSEKAVVVRSCTKDQIVARLREDRKLAAKFYRIAAVSIASRLAEISPLDIYL 303
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BLAST of mRNA_H-elongata_contig60422.13584.1 vs. uniprot
Match: A0A835YLB7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLB7_9STRA)

HSP 1 Score: 189 bits (480), Expect = 6.320e-54
Identity = 99/147 (67.35%), Postives = 114/147 (77.55%), Query Frame = 0 
Query:    1 MMTDITEREKKTLFAGSVPIGLNRNQ--------------------------EHVSNVLDSGKAMDRVVFQEIHSGEIFGFDSFLTGSPAYSSVVVDSEKAVVRSCTKDQIVARLREDRKLAAKFYRIAAVSIASRLAEISPLDIYL 121
            +M D++EREKK LFAGSVPIGLNRNQ                          EH  N LDSG+AM+RVVFQEIHSG+IFGFDSFLTG+PAYSSVVVDSEK VVRSCTKDQI+ARLREDRKL+AKFY +AAVSIA+RL+E+SPLD++L
Sbjct:  623 LMADMSEREKKQLFAGSVPIGLNRNQVVIGEHNFNDNLFLLCTGIVRVQRVQEHAQNALDSGRAMNRVVFQEIHSGQIFGFDSFLTGAPAYSSVVVDSEKCVVRSCTKDQIMARLREDRKLSAKFYSVAAVSIAARLSELSPLDLFL 769
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BLAST of mRNA_H-elongata_contig60422.13584.1 vs. uniprot
Match: A0A7S3UPK2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UPK2_HETAK)

HSP 1 Score: 137 bits (346), Expect = 1.790e-35
Identity = 69/145 (47.59%), Postives = 100/145 (68.97%), Query Frame = 0 
Query:    1 MMTDITEREKKTLFAGSVPIGLNRNQ--------------------------EHVSNVLDSGKAMDRVVFQEIHSGEIFGFDSFLTGSPAYSSVVVDSEKAVVRSCTKDQIVARLREDRKLAAKFYRIAAVSIASRLAEISPLDI 119
            ++++++E++K+ LF G++PI + RNQ                          EHV     +G+A ++VVF EI++GE+FGFDSFLTG  + SS +VDSEKA++R CTK QI+ RL+ED++LA+KFYR+AAVS+A RLAEISPLD+
Sbjct:  508 VLSEMSEKDKRGLFMGTIPIAMQRNQVVIQEDMGNSTLYLLQAGVVRIQRLREHVGGETGTGRAAEKVVFHEINAGEMFGFDSFLTGESSSSSYLVDSEKAIIRCCTKQQIMERLKEDKRLASKFYRVAAVSLALRLAEISPLDV 652
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60422.13584.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LM64_ECTSI1.250e-6796.69Cyclic nucleotide-binding domain-containing protei... [more]
A0A6H5KEB5_9PHAE5.650e-6679.05Cyclic nucleotide-binding domain-containing protei... [more]
A0A835YLB7_9STRA6.320e-5467.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3UPK2_HETAK1.790e-3547.59Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 24..115
e-value: 4.6E-6
score: 28.3
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 41..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig60422contigH-elongata_contig60422:1245..2341 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig60422.13584.1mRNA_H-elongata_contig60422.13584.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig60422 3..2341 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig60422.13584.1 ID=prot_H-elongata_contig60422.13584.1|Name=mRNA_H-elongata_contig60422.13584.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=122bp
MMTDITEREKKTLFAGSVPIGLNRNQEHVSNVLDSGKAMDRVVFQEIHSG
EIFGFDSFLTGSPAYSSVVVDSEKAVVRSCTKDQIVARLREDRKLAAKFY
RIAAVSIASRLAEISPLDIYL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR018490cNMP-bd-like