prot_H-elongata_contig60408.13580.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig60408.13580.1
Unique Nameprot_H-elongata_contig60408.13580.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length51
Homology
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BLAST of mRNA_H-elongata_contig60408.13580.1 vs. uniprot
Match: A0A6H5KMF3_9PHAE (Hist_deacetyl domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMF3_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 6.020e-12
Identity = 31/42 (73.81%), Postives = 34/42 (80.95%), Query Frame = 0 
Query:   10 RPLHLAAIGGHTGATEALIGAGCDSGLSNLQGNTALHLACSK 51
            RPLHLAA+ GH G T ALI AGCD+  +NL GNTALHLACSK
Sbjct:  350 RPLHLAALAGHVGITRALISAGCDTSFTNLHGNTALHLACSK 391
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BLAST of mRNA_H-elongata_contig60408.13580.1 vs. uniprot
Match: A0A7S2G6G0_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2G6G0_9EUKA)

HSP 1 Score: 48.5 bits (114), Expect = 3.710e-5
Identity = 24/44 (54.55%), Postives = 27/44 (61.36%), Query Frame = 0 
Query:    5 TKRRNRPLHLAAIGGHTGATEALIGAGCDSGLSNLQGNTALHLA 48
            T    RPLHLAA GGHTG    L+ +G   G +N  G TALHLA
Sbjct:  165 TNAEERPLHLAAAGGHTGTVRMLLKSGAHPGKTNYLGQTALHLA 208
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60408.13580.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KMF3_9PHAE6.020e-1273.81Hist_deacetyl domain-containing protein n=2 Tax=Ec... [more]
A0A7S2G6G0_9EUKA3.710e-554.55Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 2..51
e-value: 1.0E-10
score: 43.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 6..50
NoneNo IPR availablePFAMPF13857Ank_5coord: 5..48
e-value: 3.6E-7
score: 30.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 7..51
score: 14.398
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 7..39
score: 8.523

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig60408contigH-elongata_contig60408:348..500 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig60408.13580.1mRNA_H-elongata_contig60408.13580.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig60408 348..500 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig60408.13580.1 ID=prot_H-elongata_contig60408.13580.1|Name=mRNA_H-elongata_contig60408.13580.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=51bp
MTRVTKRRNRPLHLAAIGGHTGATEALIGAGCDSGLSNLQGNTALHLACS
K
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt