prot_H-elongata_contig60276.13566.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig60276.13566.1
Unique Nameprot_H-elongata_contig60276.13566.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length364
Homology
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BLAST of mRNA_H-elongata_contig60276.13566.1 vs. uniprot
Match: D7FTD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD6_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 8.340e-18
Identity = 61/151 (40.40%), Postives = 80/151 (52.98%), Query Frame = 0 
Query:    1 MKAVEGHCIHSFTDIMLCADILLRYPGMCRIRMHLTHCVLAAS-VQTCRSIYDQVRVVYNATRSPGWRPAPPFEEWTSMDDICDNVFCRSLQAEIKDSNSHWSGDSFISTDVR----ATSSQSSSCDDSSCQVANGEDTCGSPPLPLMSRL 146
            MK V G        +   ADI+LRYPG+ R R H  HC LA S     R +YD +  VYN+ R PG   APP+EEW ++  ICDN+FCRS +AEI  ++    G+  + T+V      TS  +S    S C  A  ++  GS P  L  RL
Sbjct:  197 MKTVNGDVEDLIKCLQASADIVLRYPGIVRFRPHFIHCTLAVSHFSKRRDMYDAMNGVYNSIRPPGCWRAPPYEEWRTITQICDNMFCRSFEAEIHKAHH---GEGLMQTNVSDNEDVTSGPASGSMKSPCIGAERQNG-GSLPAELCQRL 343
[Close]
BLAST of mRNA_H-elongata_contig60276.13566.1 vs. uniprot
Match: A0A6H5K678_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K678_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 8.850e-9
Identity = 35/97 (36.08%), Postives = 48/97 (49.48%), Query Frame = 0 
Query:    1 MKAVEGHCIHSFTDIMLCADILLRYPGMCRIRM--HLTHCVLAASVQTCR-SIYDQVRVVYNATRSPGWRPAPPFEEWTSMDDICDNVFCRSLQAEI 94
            ++A++     S          LLRYPG+CR     H  H  L       R   Y+ +R  YN  R     PAPPFEEWT M DICD+ +CR++  ++
Sbjct:  570 LQALDNEIAASVGSFHRSVSALLRYPGLCRYNSLSHNVHTQLWGLANARRREQYEALRAAYNPMRPARLSPAPPFEEWTGMSDICDHPYCRNVAEQM 666
[Close]
BLAST of mRNA_H-elongata_contig60276.13566.1 vs. uniprot
Match: D8LSE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSE2_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 1.980e-8
Identity = 35/103 (33.98%), Postives = 50/103 (48.54%), Query Frame = 0 
Query:    1 MKAVEGHCIHSFTDIMLCADILLRYPGMCRIRM--HLTHCVLAASVQTCR-SIYDQVRVVYNATRSPGWRPAPPFEEWTSMDDICDNVFCRSLQAEIKDSNSH 100
            ++A+      S          LLRYPG+CR     H  H  L       R   Y+ +R  YN  R     PAPPF+EWT M DICD+ +CR++  ++  + +H
Sbjct:  494 LQALNNDIAASAGSFHRSVSALLRYPGLCRYNSLSHNAHTQLWGLANARRREHYEALRAAYNPMRPASLSPAPPFDEWTGMSDICDHPYCRNVAEQMSAAFAH 596
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60276.13566.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FTD6_ECTSI8.340e-1840.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K678_9PHAE8.850e-936.08Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LSE2_ECTSI1.980e-833.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig60276contigH-elongata_contig60276:871..2591 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig60276.13566.1mRNA_H-elongata_contig60276.13566.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig60276 2..2624 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig60276.13566.1 ID=prot_H-elongata_contig60276.13566.1|Name=mRNA_H-elongata_contig60276.13566.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=364bp
MKAVEGHCIHSFTDIMLCADILLRYPGMCRIRMHLTHCVLAASVQTCRSI
YDQVRVVYNATRSPGWRPAPPFEEWTSMDDICDNVFCRSLQAEIKDSNSH
WSGDSFISTDVRATSSQSSSCDDSSCQVANGEDTCGSPPLPLMSRLHPGK
PLKSSESASLTSTTRGDQTLAGPVSLSGVDSETSSWSFCTNSALAGAAAG
NAEMVTTAESGMQRYAPAAAVEADIPLPLASCELVRPTLSAAFPTRISAT
NPSAGAFVGRTADYELPMVDLVDARTKTLAPSTADGTARNDLAVGASGVA
LESDLSAASVSSIRDLKYLGEVGMNGASCDLITEEDLMEAAELLLSERLL
EFEPDRESARCVG*
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