prot_H-elongata_contig60072.13543.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig60072.13543.1
Unique Nameprot_H-elongata_contig60072.13543.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length107
Homology
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BLAST of mRNA_H-elongata_contig60072.13543.1 vs. uniprot
Match: A0A6H5K6U1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K6U1_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 6.920e-6
Identity = 35/67 (52.24%), Postives = 42/67 (62.69%), Query Frame = 0 
Query:    3 ELKAQRKAAAAVGLKAGEVIETVTMGAIGGTGSGTGGSGAGMDTALMPPSMKWRKLSPSEILEAAKK 69
            +LK QRKAAAA GLK GEVIE  T        +G GG G   + A  P +  WRKL+P+EIL+AA K
Sbjct:   72 QLKEQRKAAAAAGLKPGEVIEAATA-------AGAGGDGIRGENA--PWNGSWRKLTPAEILQAAGK 129
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60072.13543.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K6U1_9PHAE6.920e-652.24Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig60072contigH-elongata_contig60072:740..1060 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig60072.13543.1mRNA_H-elongata_contig60072.13543.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig60072 740..1060 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig60072.13543.1 ID=prot_H-elongata_contig60072.13543.1|Name=mRNA_H-elongata_contig60072.13543.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=107bp
MRELKAQRKAAAAVGLKAGEVIETVTMGAIGGTGSGTGGSGAGMDTALMP
PSMKWRKLSPSEILEAAKKGPITNVVAKPPNDERYTVASGARDAANIKCG
DRTAGMS
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