prot_H-elongata_contig59913.13526.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig59913.13526.1
Unique Nameprot_H-elongata_contig59913.13526.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length169
Homology
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BLAST of mRNA_H-elongata_contig59913.13526.1 vs. uniprot
Match: A0A6H5JVE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE7_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 2.490e-9
Identity = 55/153 (35.95%), Postives = 73/153 (47.71%), Query Frame = 0 
Query:   41 QQIAALAWTAVPVG------CSPFDSGLLSRVQIERLPAINR--------LRRDCARFTWSPPPALQL------RGGA-PAAVSFADDFN---LGVNGTEAPQQPSKGRESLSLQYDKTGSLPRAGEHDGQIAALALPALLSLLVDPMLSIVD 169
              +  + WT V +       C  + + LL  V ++   A  R        LR +C R     P  ++L      RGGA PA V  ADD N    G NG  A  Q   G     ++ +    L    +HDGQI+ALALPAL+SLLVDP+LS+VD
Sbjct:    3 HHLYGIGWTQVILYVSSLALCCRYGTSLLPGVVLQGRSAAARGFQQRHHPLRSNCPRLPPGEPDPVRLSRLSRLRGGAQPAEVYVADDSNESYAGGNGDGAENQAKAG----DMKKEGKWLLLGVSQHDGQISALALPALMSLLVDPILSLVD 151
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59913.13526.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JVE7_9PHAE2.490e-935.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig59913contigH-elongata_contig59913:171..2998 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig59913.13526.1mRNA_H-elongata_contig59913.13526.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig59913 169..2998 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig59913.13526.1 ID=prot_H-elongata_contig59913.13526.1|Name=mRNA_H-elongata_contig59913.13526.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=169bp
RRSQEEISSCFPWTHGSMPGRSLHGIRAILYIHIFAGFLHQQIAALAWTA
VPVGCSPFDSGLLSRVQIERLPAINRLRRDCARFTWSPPPALQLRGGAPA
AVSFADDFNLGVNGTEAPQQPSKGRESLSLQYDKTGSLPRAGEHDGQIAA
LALPALLSLLVDPMLSIVD
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