prot_H-elongata_contig59837.13503.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig59837.13503.1
Unique Name	prot_H-elongata_contig59837.13503.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	87

Homology

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BLAST of mRNA_H-elongata_contig59837.13503.1 vs. uniprot
Match: A0A6H5KG34_9PHAE (LepA_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG34_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 3.400e-50
Identity = 75/87 (86.21%), Postives = 83/87 (95.40%), Query Frame = 0

Query:    1 EVITDFFDQVKSRSKGYASMEYQLLDWRDEDLVRLDIKINGEDAPPLSTICHRSQAYGRGKNLADKLKELIPRQMFRVPIQACVGVK 87
            EVITDFFDQVKSRSKGYASMEYQ+L+WRD+DLVRLDIKINGEDAPPLST+CHR QA+ RGK L +KLK+LIPRQMFRVPIQAC+GVK
Sbjct:    7 EVITDFFDQVKSRSKGYASMEYQILEWRDQDLVRLDIKINGEDAPPLSTVCHRDQAHQRGKVLTEKLKQLIPRQMFRVPIQACIGVK 93

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BLAST of mRNA_H-elongata_contig59837.13503.1 vs. uniprot
Match: D7G0L8_ECTSI (Translation factor GUF1 homolog, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0L8_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 1.990e-45
Identity = 75/87 (86.21%), Postives = 83/87 (95.40%), Query Frame = 0

Query:    1 EVITDFFDQVKSRSKGYASMEYQLLDWRDEDLVRLDIKINGEDAPPLSTICHRSQAYGRGKNLADKLKELIPRQMFRVPIQACVGVK 87
            EVITDFFDQVKSRSKGYASMEYQ+L+WRD+DLVRLDIKINGEDAPPLST+CHR QA+ RGK L +KLK+LIPRQMFRVPIQAC+GVK
Sbjct:  567 EVITDFFDQVKSRSKGYASMEYQILEWRDQDLVRLDIKINGEDAPPLSTVCHRDQAHQRGKVLTEKLKQLIPRQMFRVPIQACIGVK 653

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BLAST of mRNA_H-elongata_contig59837.13503.1 vs. uniprot
Match: A0A836CDX2_9STRA (Translation factor GUF1 homolog, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDX2_9STRA)

HSP 1 Score: 146 bits (368), Expect = 2.970e-39
Identity = 68/87 (78.16%), Postives = 77/87 (88.51%), Query Frame = 0

Query:    1 EVITDFFDQVKSRSKGYASMEYQLLDWRDEDLVRLDIKINGEDAPPLSTICHRSQAYGRGKNLADKLKELIPRQMFRVPIQACVGVK 87
            EVITDFFDQVKSRSKGYASMEY L  +R+ DLVRLDIKINGE+A PL++ICHR QA+ RGK L +KLK+LIPRQMFRVPIQAC+G K
Sbjct:  473 EVITDFFDQVKSRSKGYASMEYSLTGYRENDLVRLDIKINGEEAGPLASICHRDQAHQRGKQLTEKLKQLIPRQMFRVPIQACIGAK 559

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BLAST of mRNA_H-elongata_contig59837.13503.1 vs. uniprot
Match: A0A6U1P806_9STRA (Translation factor GUF1 homolog, mitochondrial n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1P806_9STRA)

HSP 1 Score: 141 bits (355), Expect = 6.500e-39
Identity = 63/87 (72.41%), Postives = 77/87 (88.51%), Query Frame = 0

Query:    1 EVITDFFDQVKSRSKGYASMEYQLLDWRDEDLVRLDIKINGEDAPPLSTICHRSQAYGRGKNLADKLKELIPRQMFRVPIQACVGVK 87
            EVITDFFDQ+KSR++GYASMEY ++ +R++DL RLDIKINGEDAPPL+TI HR +AY  GK L +KLKELIPRQ FRVP+QAC+G+K
Sbjct:  209 EVITDFFDQMKSRTRGYASMEYSMIGYREDDLCRLDIKINGEDAPPLATIVHREKAYAVGKALTEKLKELIPRQQFRVPVQACIGMK 295

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BLAST of mRNA_H-elongata_contig59837.13503.1 vs. uniprot
Match: A0A7R9VCM2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VCM2_9STRA)

HSP 1 Score: 136 bits (342), Expect = 1.010e-38
Identity = 64/87 (73.56%), Postives = 74/87 (85.06%), Query Frame = 0

Query:    1 EVITDFFDQVKSRSKGYASMEYQLLDWRDEDLVRLDIKINGEDAPPLSTICHRSQAYGRGKNLADKLKELIPRQMFRVPIQACVGVK 87
            EVITDFFDQ+KSR+KGYASMEY ++D+R+ DLVRLD+KIN EDAPPL+TI HR  A   G+ L   LKELIPRQMF+VPIQACVGVK
Sbjct:   47 EVITDFFDQLKSRTKGYASMEYSIVDYRESDLVRLDVKINYEDAPPLATIVHRDAAQTVGRKLVASLKELIPRQMFKVPIQACVGVK 133

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BLAST of mRNA_H-elongata_contig59837.13503.1 vs. uniprot
Match: A0A7S2W0C2_9STRA (Translation factor GUF1 homolog, mitochondrial n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W0C2_9STRA)

HSP 1 Score: 141 bits (355), Expect = 1.500e-38
Identity = 66/87 (75.86%), Postives = 76/87 (87.36%), Query Frame = 0

Query:    1 EVITDFFDQVKSRSKGYASMEYQLLDWRDEDLVRLDIKINGEDAPPLSTICHRSQAYGRGKNLADKLKELIPRQMFRVPIQACVGVK 87
            EVITDFFDQ+KSR+KGYASMEY ++D+R  DLVRLD+KINGEDAPPL++I HR QA   G+ L  KLKELIPRQMFRVPIQAC+GVK
Sbjct:  250 EVITDFFDQLKSRTKGYASMEYSIIDYRASDLVRLDVKINGEDAPPLASIMHRDQAQIVGRRLVAKLKELIPRQMFRVPIQACIGVK 336

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BLAST of mRNA_H-elongata_contig59837.13503.1 vs. uniprot
Match: A0A7S2EU07_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EU07_9STRA)

HSP 1 Score: 135 bits (340), Expect = 3.080e-38
Identity = 63/87 (72.41%), Postives = 74/87 (85.06%), Query Frame = 0

Query:    1 EVITDFFDQVKSRSKGYASMEYQLLDWRDEDLVRLDIKINGEDAPPLSTICHRSQAYGRGKNLADKLKELIPRQMFRVPIQACVGVK 87
            EVITDFFDQ+KSR+KGYASMEY++ D+R+ DLVRLD+KIN EDAPPL+TI HR  A   G+ L   LKELIPRQMF+VPIQAC+GVK
Sbjct:   61 EVITDFFDQLKSRTKGYASMEYKVTDYRESDLVRLDVKINYEDAPPLATIVHRDAAQSVGRKLVAALKELIPRQMFKVPIQACIGVK 147

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BLAST of mRNA_H-elongata_contig59837.13503.1 vs. uniprot
Match: A0A7S2RSX4_9STRA (Translation factor GUF1 homolog, mitochondrial n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSX4_9STRA)

HSP 1 Score: 141 bits (356), Expect = 1.990e-37
Identity = 64/87 (73.56%), Postives = 75/87 (86.21%), Query Frame = 0

Query:    1 EVITDFFDQVKSRSKGYASMEYQLLDWRDEDLVRLDIKINGEDAPPLSTICHRSQAYGRGKNLADKLKELIPRQMFRVPIQACVGVK 87
            EVITDFFD++KSRSKGYASMEY  + +R  DLVRLD++INGEDAPPL+ ICHR+ AY  GK L +KLKELIPRQ F+VPIQAC+GVK
Sbjct:  526 EVITDFFDELKSRSKGYASMEYTTIGYRANDLVRLDVRINGEDAPPLACICHRNDAYSIGKGLTEKLKELIPRQQFKVPIQACIGVK 612

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BLAST of mRNA_H-elongata_contig59837.13503.1 vs. uniprot
Match: A0A7S2CTP0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CTP0_9STRA)

HSP 1 Score: 131 bits (330), Expect = 5.750e-37
Identity = 60/87 (68.97%), Postives = 74/87 (85.06%), Query Frame = 0

Query:    1 EVITDFFDQVKSRSKGYASMEYQLLDWRDEDLVRLDIKINGEDAPPLSTICHRSQAYGRGKNLADKLKELIPRQMFRVPIQACVGVK 87
            EVITDFFD++KSR+KGYASM+Y  + +R  DLVRLD+KINGEDA PL+TI H+  A+  GK L +KLKE+IPRQ+FRVPIQAC+GVK
Sbjct:   42 EVITDFFDEMKSRTKGYASMDYTPIGYRANDLVRLDVKINGEDASPLATIVHKDSAHSIGKALTEKLKEVIPRQLFRVPIQACIGVK 128

[Close]

BLAST of mRNA_H-elongata_contig59837.13503.1 vs. uniprot
Match: A0A836C4S4_9CHLO (Translation factor GUF1 homolog, chloroplastic n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C4S4_9CHLO)

HSP 1 Score: 139 bits (351), Expect = 1.040e-36
Identity = 64/87 (73.56%), Postives = 75/87 (86.21%), Query Frame = 0

Query:    1 EVITDFFDQVKSRSKGYASMEYQLLDWRDEDLVRLDIKINGEDAPPLSTICHRSQAYGRGKNLADKLKELIPRQMFRVPIQACVGVK 87
            EV+TD+FDQ+KSRSKGYASMEY+++ +R+ DLV+L+IKINGE A PLS ICHR  AY  G+ L  KLKELIPRQMFRVPIQACVGVK
Sbjct:  538 EVVTDYFDQLKSRSKGYASMEYKVIGYRENDLVKLEIKINGEPAEPLSVICHRDTAYKTGRQLTSKLKELIPRQMFRVPIQACVGVK 624

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig59837.13503.1 vs. uniprot

BLAST of mRNA_H-elongata_contig59837.13503.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KG34_9PHAE	3.400e-50	86.21	LepA_C domain-containing protein n=1 Tax=Ectocarpu...	[more]
D7G0L8_ECTSI	1.990e-45	86.21	Translation factor GUF1 homolog, mitochondrial n=1...	[more]
A0A836CDX2_9STRA	2.970e-39	78.16	Translation factor GUF1 homolog, mitochondrial n=1...	[more]
A0A6U1P806_9STRA	6.500e-39	72.41	Translation factor GUF1 homolog, mitochondrial n=1...	[more]
A0A7R9VCM2_9STRA	1.010e-38	73.56	Hypothetical protein n=1 Tax=Pseudictyota dubia Ta...	[more]
A0A7S2W0C2_9STRA	1.500e-38	75.86	Translation factor GUF1 homolog, mitochondrial n=1...	[more]
A0A7S2EU07_9STRA	3.080e-38	72.41	Hypothetical protein n=1 Tax=Ditylum brightwellii ...	[more]
A0A7S2RSX4_9STRA	1.990e-37	73.56	Translation factor GUF1 homolog, mitochondrial n=1...	[more]
A0A7S2CTP0_9STRA	5.750e-37	68.97	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A836C4S4_9CHLO	1.040e-36	73.56	Translation factor GUF1 homolog, chloroplastic n=1...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038363	LepA, C-terminal domain superfamily	GENE3D	3.30.70.2570		coord: 31..87 e-value: 4.2E-22 score: 79.8
IPR013842	GTP-binding protein LepA, C-terminal	PFAM	PF06421	LepA_C	coord: 39..87 e-value: 1.2E-14 score: 54.4
None	No IPR available	GENE3D	3.30.70.3380		coord: 1..30 e-value: 1.8E-8 score: 36.3
None	No IPR available	PANTHER	PTHR43512	FAMILY NOT NAMED	coord: 1..87
None	No IPR available	PANTHER	PTHR43512:SF5		coord: 1..87
IPR035647	EF-G domain III/V-like	SUPERFAMILY	54980	EF-G C-terminal domain-like	coord: 4..42

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig59837	contig	H-elongata_contig59837:309..1259 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig59837.13503.1	mRNA_H-elongata_contig59837.13503.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig59837 309..1259 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig59837.13503.1 ID=prot_H-elongata_contig59837.13503.1|Name=mRNA_H-elongata_contig59837.13503.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp
EVITDFFDQVKSRSKGYASMEYQLLDWRDEDLVRLDIKINGEDAPPLSTI
CHRSQAYGRGKNLADKLKELIPRQMFRVPIQACVGVK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR038363	LepA_C_sf
IPR013842	LepA_CTD
IPR035647	EFG_III/V