prot_H-elongata_contig59780.13495.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig59780.13495.1
Unique Nameprot_H-elongata_contig59780.13495.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length80
Homology
BLAST of mRNA_H-elongata_contig59780.13495.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 1.450e-21
Identity = 43/66 (65.15%), Postives = 54/66 (81.82%), Query Frame = 0
Query:   12 LHVAGNRTYSPRAKHIALRYFFVQELVEESKISIHYVKTEDQLADLGTKPLSNHRHRNLIKLINEF 77
            LH  GNR++S R KHIALR+FF++ELV E KISIHYV+TED LAD+GTK  +NHR ++L+ LIN F
Sbjct:  930 LHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTKHFNNHRFKHLMDLINNF 995          
BLAST of mRNA_H-elongata_contig59780.13495.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 2.410e-20
Identity = 42/66 (63.64%), Postives = 52/66 (78.79%), Query Frame = 0
Query:   12 LHVAGNRTYSPRAKHIALRYFFVQELVEESKISIHYVKTEDQLADLGTKPLSNHRHRNLIKLINEF 77
            LH  GNR++S R KHIALR+FF++ELV E KISIHYV TED LAD+GTK  + HR ++L+ LIN F
Sbjct: 1599 LHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLINNF 1664          
BLAST of mRNA_H-elongata_contig59780.13495.1 vs. uniprot
Match: A0A6H5KCX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCX7_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 9.410e-20
Identity = 42/67 (62.69%), Postives = 52/67 (77.61%), Query Frame = 0
Query:   12 LHVAGNRTYSPRAKHIALRYFFVQELVEESKISIHYVKTEDQLADLGTKPLSN-HRHRNLIKLINEF 77
            LH  GNR++S R KHIALR+FF++ELV E KISIHYV TED LAD+GTK   N HR ++L+ L+N F
Sbjct:  192 LHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFINKHRFKHLMDLVNNF 258          
BLAST of mRNA_H-elongata_contig59780.13495.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 1.520e-19
Identity = 41/66 (62.12%), Postives = 51/66 (77.27%), Query Frame = 0
Query:   12 LHVAGNRTYSPRAKHIALRYFFVQELVEESKISIHYVKTEDQLADLGTKPLSNHRHRNLIKLINEF 77
            LH  GNR++S R KHIALR+FF++ELV E KISIHYV TED LAD+GTK  + HR ++L+ LIN  
Sbjct:  591 LHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLINNL 656          
BLAST of mRNA_H-elongata_contig59780.13495.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 1.600e-19
Identity = 41/66 (62.12%), Postives = 50/66 (75.76%), Query Frame = 0
Query:   12 LHVAGNRTYSPRAKHIALRYFFVQELVEESKISIHYVKTEDQLADLGTKPLSNHRHRNLIKLINEF 77
            LH  GNR++S R KHIALR+FF++ELV E KISIHY  TED LAD+GTK  + HR  +L+ LIN F
Sbjct:  370 LHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTKHFNKHRFEHLMDLINNF 435          
BLAST of mRNA_H-elongata_contig59780.13495.1 vs. uniprot
Match: A0A6H5KMK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK0_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 3.670e-19
Identity = 39/66 (59.09%), Postives = 49/66 (74.24%), Query Frame = 0
Query:   12 LHVAGNRTYSPRAKHIALRYFFVQELVEESKISIHYVKTEDQLADLGTKPLSNHRHRNLIKLINEF 77
            LH  GNR++S R KHIALR+FF++ELV E KISIHY  TED LA +GTK  + HR ++L+  IN F
Sbjct:  145 LHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYAPTEDNLAHIGTKHFNKHRFKHLMDRINNF 210          
BLAST of mRNA_H-elongata_contig59780.13495.1 vs. uniprot
Match: A0A6H5KBU1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU1_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 1.210e-17
Identity = 37/65 (56.92%), Postives = 52/65 (80.00%), Query Frame = 0
Query:   12 LHVAGNRTYSPRAKHIALRYFFVQELVEESKISIHYVKTEDQLADLGTKPLSNHRHRNLIKLINE 76
            LHV GN+T+S R KH+ALR+F+++E+V+E +ISIHY+ TED LAD+GTK L+  RH+ LI  I +
Sbjct:  623 LHVIGNQTFSGRTKHVALRFFYIREIVKEGRISIHYIPTEDNLADIGTKHLNKQRHQCLIDKIKK 687          
BLAST of mRNA_H-elongata_contig59780.13495.1 vs. uniprot
Match: A0A6H5K129_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K129_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 2.010e-16
Identity = 33/64 (51.56%), Postives = 51/64 (79.69%), Query Frame = 0
Query:   12 LHVAGNRTYSPRAKHIALRYFFVQELVEESKISIHYVKTEDQLADLGTKPLSNHRHRNLIKLIN 75
            LH  GNR++S R KHIALR+F+++EL+ E +ISIHY+ T+  +AD+GTK L+ HR ++L+ +I+
Sbjct: 1100 LHALGNRSFSSRTKHIALRFFYIRELISEGRISIHYIPTDSNIADIGTKHLNKHRLKHLLDIIS 1163          
BLAST of mRNA_H-elongata_contig59780.13495.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 2.760e-16
Identity = 38/61 (62.30%), Postives = 46/61 (75.41%), Query Frame = 0
Query:   18 RTYSPRAKHIALRYFFVQELVEESKISIHYVKTEDQLADLGTKPLSNHRHRNLIKLINEFK 78
            R  S R KHIALR+FFV+ELV E KISIHYV TED LAD+GTK  + HR ++L+ LIN  +
Sbjct: 1713 RAASSRTKHIALRFFFVRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLVDLINNLR 1773          
BLAST of mRNA_H-elongata_contig59780.13495.1 vs. uniprot
Match: A0A6H5J9Q7_9PHAE (gag_pre-integrs domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Q7_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 3.710e-16
Identity = 35/68 (51.47%), Postives = 51/68 (75.00%), Query Frame = 0
Query:   12 LHVAGNRTYSPRAKHIALRYFFVQELVEESKISIHYVKTEDQLADLGTKPLSNHRHRNLIKLINEFKA 79
            LH  GNR++S R KHIALR+F+++ELV E +ISIHYV T+   AD+GTK L+ +R ++L+ +I+ F  
Sbjct:  756 LHALGNRSFSSREKHIALRFFYIRELVSEGRISIHYVPTDSNPADIGTKHLNKYRLKHLLDIISSFNV 823          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59780.13495.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNH5_9PHAE1.450e-2165.15Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KJH6_9PHAE2.410e-2063.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCX7_9PHAE9.410e-2062.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JME8_9PHAE1.520e-1962.12Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L5U2_9PHAE1.600e-1962.12Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KMK0_9PHAE3.670e-1959.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBU1_9PHAE1.210e-1756.92CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K129_9PHAE2.010e-1651.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J842_9PHAE2.760e-1662.30Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5J9Q7_9PHAE3.710e-1651.47gag_pre-integrs domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig59780contigH-elongata_contig59780:3311..3550 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig59780.13495.1mRNA_H-elongata_contig59780.13495.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig59780 3311..3550 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig59780.13495.1 ID=prot_H-elongata_contig59780.13495.1|Name=mRNA_H-elongata_contig59780.13495.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=80bp
MRASAAYRCTALHVAGNRTYSPRAKHIALRYFFVQELVEESKISIHYVKT
EDQLADLGTKPLSNHRHRNLIKLINEFKA*
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