prot_H-elongata_contig59732.13490.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig59732.13490.1
Unique Nameprot_H-elongata_contig59732.13490.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length165
Homology
BLAST of mRNA_H-elongata_contig59732.13490.1 vs. uniprot
Match: D8LBI9_ECTSI (Fimbrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBI9_ECTSI)

HSP 1 Score: 288 bits (736), Expect = 2.410e-89
Identity = 145/168 (86.31%), Postives = 153/168 (91.07%), Query Frame = 0
Query:    1 MGLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQSLSKKGKRIDDPQIVAWANSKVEGSKIRSFADPSLSTGVFLLKVCHGIDRSVVNWDLVTMEPGSGEDDKLNNAKYAISVARKLGACVFVASEDIVQVKSKMIMLFCASLWHCENERTVS---GGAAVGPS 165
            MGLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQ+LSKKGKRI+DPQIVAWANSKVEGSKIRSF DPSLSTGVFLLKVCHGID+S VNWDLV M+P + ED K NNAKYAISVARKLGACVFVA+EDIVQV S+MIMLFCASLWHCENERT S   GGA   P+
Sbjct:  536 MGLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQALSKKGKRIEDPQIVAWANSKVEGSKIRSFGDPSLSTGVFLLKVCHGIDQSTVNWDLVVMDPANDED-KTNNAKYAISVARKLGACVFVAAEDIVQVMSRMIMLFCASLWHCENERTASPDGGGAGAMPA 702          
BLAST of mRNA_H-elongata_contig59732.13490.1 vs. uniprot
Match: A0A6H5JJ18_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ18_9PHAE)

HSP 1 Score: 263 bits (673), Expect = 1.570e-80
Identity = 136/163 (83.44%), Postives = 143/163 (87.73%), Query Frame = 0
Query:    1 MGLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQS------LSKKGKRIDDPQIVAWANSKVEGSKIRSFADPSLSTGVFLLKVCHGIDRSVVNWDLVTMEPGSGEDDKLNNAKYAISVARKLGACVFVASEDIVQVKSKMIMLFCASLWHCENERTVS 157
            MGLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQ+      LSKKGKRI+DPQIVAWANSKVEGSKIRSF DPSLSTGV     CHGID+S VNWDLV M+P + ED K NNAKYAISVARKLGACVFVA+EDIVQV S+MIMLFCASLWHCENERT S
Sbjct:  483 MGLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQARDGGAALSKKGKRIEDPQIVAWANSKVEGSKIRSFGDPSLSTGV-----CHGIDQSTVNWDLVVMDPANDED-KTNNAKYAISVARKLGACVFVAAEDIVQVMSRMIMLFCASLWHCENERTAS 639          
BLAST of mRNA_H-elongata_contig59732.13490.1 vs. uniprot
Match: A0A835YV37_9STRA (Actin bundling protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV37_9STRA)

HSP 1 Score: 244 bits (622), Expect = 2.270e-74
Identity = 124/160 (77.50%), Postives = 138/160 (86.25%), Query Frame = 0
Query:    1 MGLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQSLSKKG-KRIDDPQIVAWANSKVEGSKIRSFADPSLSTGVFLLKVCHGIDRSVVNWDLVTMEPGSGEDDKLNNAKYAISVARKLGACVFVASEDIVQVKSKMIMLFCASLWHCENERTVSGG 159
            M LTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQ LS  G KRI+DP++V WANSKV G+KIRSF+DPSLS+GVFLL+VCHGIDR VV+W+LV  +  S ED K NNAKYAISVARKLGA VFVASEDIV+V+ +MIMLFCASLWH EN R  + G
Sbjct:  470 MQLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQHLSTTGTKRIEDPEVVKWANSKVAGAKIRSFSDPSLSSGVFLLQVCHGIDRGVVDWELVVTDAQSTED-KTNNAKYAISVARKLGALVFVASEDIVEVRGRMIMLFCASLWHAENARKAANG 628          
BLAST of mRNA_H-elongata_contig59732.13490.1 vs. uniprot
Match: A0A836CF36_9STRA (Actin binding protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF36_9STRA)

HSP 1 Score: 238 bits (607), Expect = 1.370e-72
Identity = 117/154 (75.97%), Postives = 138/154 (89.61%), Query Frame = 0
Query:    1 MGLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQSLS-KKGKRIDDPQIVAWANSKVEGSKIRSFADPSLSTGVFLLKVCHGIDRSVVNWDLVTMEPGSGEDDKLNNAKYAISVARKLGACVFVASEDIVQVKSKMIMLFCASLWHCENE 153
            M LTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQ LS  K K+I+DP+IV WANSK  G KI+SFADPSL++GVFLLKVCHG+++ VVNW+LV MEP + + D++NNAKYAISVARK+GA VFVA+EDIV+V+S+MIMLFCASLWH +N+
Sbjct:  466 MRLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQQLSTNKNKQIEDPEIVRWANSKSAGMKIKSFADPSLNSGVFLLKVCHGMNKGVVNWELVIMEPTT-QTDRINNAKYAISVARKIGALVFVAAEDIVEVRSRMIMLFCASLWHADNQ 618          
BLAST of mRNA_H-elongata_contig59732.13490.1 vs. uniprot
Match: A0A7S2CPJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CPJ7_9STRA)

HSP 1 Score: 172 bits (437), Expect = 1.970e-49
Identity = 86/167 (51.50%), Postives = 121/167 (72.46%), Query Frame = 0
Query:    1 MGLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQSLSKKGKRIDDPQIVAWANSKV----EGSKIRSFADPSLSTGVFLLKVCHGIDRSVVNWDLVTMEPGSGEDDKLNNAKYAISVARKLGACVFVASEDIVQVKSKMIMLFCASLWHCENERTVSGGAAVG 163
            M L +VN+GG+DI DGN+K+ LAIMWQLMR+ TL++L++LS  G  I + Q+V WAN+ V    + ++IR+ +D SLSTG FL+ +C  +  + V+W++VT  PG+ EDDKL+NAKY IS+ARK+GACVF+  EDIV++K KMI  F  +LW       +SGGA+ G
Sbjct:  155 MDLVLVNIGGVDIADGNKKLILAIMWQLMRQFTLDMLKNLSGDGTSITEDQMVQWANNTVAQSGKATQIRNLSDSSLSTGAFLIDLCAAVAPNAVDWEIVT--PGANEDDKLSNAKYCISIARKIGACVFLTPEDIVEIKPKMIFTFIGALWTTH----LSGGASAG 315          
BLAST of mRNA_H-elongata_contig59732.13490.1 vs. uniprot
Match: A0A7S2S2Z4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2Z4_9STRA)

HSP 1 Score: 169 bits (427), Expect = 9.660e-46
Identity = 86/167 (51.50%), Postives = 117/167 (70.06%), Query Frame = 0
Query:    1 MGLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQSLSKKGKRIDDPQIVAWANSKVEGS-----KIRSFADPSLSTGVFLLKVCHGIDRSVVNWDLVTMEPGSGEDDKLNNAKYAISVARKLGACVFVASEDIVQVKSKMIMLFCASLWHCENERTVSGGAAV 162
            M L +VN+GG DI D N+K+ LAIMWQLMR  TL ++  LS  G +I D Q+VAWAN+KV  +      IR+  D SL+TG FL+++C  ++ + V+W+LVT   G  ++D+++NA+YAIS+ARKLGACVF+  EDIV+VK KM+  F ASLW  E E TV+ G A 
Sbjct:  483 MDLVLVNIGGPDIADKNKKLILAIMWQLMRLFTLKMVAQLSGDGTKITDKQVVAWANNKVASAGRSSLSIRNLHDSSLATGQFLIELCGAVNPNTVDWELVTA--GETQEDQISNARYAISIARKLGACVFLTPEDIVEVKPKMLFTFIASLWTAELEGTVATGGAA 647          
BLAST of mRNA_H-elongata_contig59732.13490.1 vs. uniprot
Match: F0YB19_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YB19_AURAN)

HSP 1 Score: 165 bits (417), Expect = 4.220e-44
Identity = 83/166 (50.00%), Postives = 115/166 (69.28%), Query Frame = 0
Query:    1 MGLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQSLSKKGKRIDDPQIVAWANSKVE-----GSK--IRSFADPSLSTGVFLLKVCHGIDRSVVNWDLVTMEPGSGEDDKLNNAKYAISVARKLGACVFVASEDIVQVKSKMIMLFCASLWHCENERTVSGG 159
            M L +VN+GG+DI DGN+K+ LA+MWQLMR+ T+++L SL   G  + +P+++AWAN+KV      GSK  I+S  D  ++   FLL++C  +   VVNW+LV   PG G DD+ +NAKYA+SVARKLGA VF   EDIV+VK KM++LF A++W  E     +GG
Sbjct: 1305 MDLVLVNIGGVDIADGNKKLILAVMWQLMRQQTIDMLSSLKGDGTAVAEPELIAWANAKVAASPRPGSKKPIKSLNDKYIAKATFLLELCDAVGGGVVNWELVA--PGDGGDDRHSNAKYALSVARKLGARVFCTPEDIVEVKPKMMLLFIAAVWQAELSGATTGG 1468          
BLAST of mRNA_H-elongata_contig59732.13490.1 vs. uniprot
Match: A0A812Z4F6_SYMMI (FIM4 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Z4F6_SYMMI)

HSP 1 Score: 149 bits (377), Expect = 7.470e-43
Identity = 73/154 (47.40%), Postives = 107/154 (69.48%), Query Frame = 0
Query:    1 MGLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQSLSKKG--KRIDDPQIVAWANSKVEGS----KIRSFADPSLSTGVFLLKVCHGIDRSVVNWDLVTMEPGSGEDDKLNNAKYAISVARKLGACVFVASEDIVQVKSKMIMLFCASLW 148
            MG ++VN+GGLDI+D  +K+ LAI+WQLMR++TL +L  L+       + + Q++ WAN KV  S     +R+F D SL  G F L + + I+   VNW+LVT   G  ++++++NAKY+IS+ARK+GACVF+  EDIV+VKSKM+M F + LW
Sbjct:   25 MGFSMVNIGGLDIVDKQKKLILAIIWQLMRKYTLLVLAQLASHSGVTEVSEEQVINWANQKVASSGKTSTMRNFKDQSLKNGTFFLDLVNAIEPRAVNWELVTA--GGTDEERMSNAKYSISIARKIGACVFLTPEDIVEVKSKMLMTFVSGLW 176          
BLAST of mRNA_H-elongata_contig59732.13490.1 vs. uniprot
Match: A0A812VU38_SYMMI (FIM3 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VU38_SYMMI)

HSP 1 Score: 155 bits (393), Expect = 2.140e-42
Identity = 79/154 (51.30%), Postives = 111/154 (72.08%), Query Frame = 0
Query:    1 MGLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQSLSKKG--KRIDDPQIVAWANSKV----EGSKIRSFADPSLSTGVFLLKVCHGIDRSVVNWDLVTMEPGSGEDDKLNNAKYAISVARKLGACVFVASEDIVQVKSKMIMLFCASLW 148
            MG ++VN+GGLDI+  ++K+ LAI+WQLMRRHTL +L +L+       + +  I+ WANS+V    + S +++F D SL TGVFLL +   ++   VNWDLVT   G  +DD+L+NAKY ISV++K+GACVF+  EDIV+VKSKMIM F +S+W
Sbjct:  301 MGFSMVNIGGLDIVHKDKKLILAIIWQLMRRHTLKVLAALAAHEGLTEVTEEHIIHWANSRVARSGKTSTMQNFKDHSLKTGVFLLDLVAAVEPRAVNWDLVTT--GENDDDQLSNAKYCISVSQKIGACVFLTPEDIVEVKSKMIMTFVSSIW 452          
BLAST of mRNA_H-elongata_contig59732.13490.1 vs. uniprot
Match: D2VCL8_NAEGR (Actin bundling protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VCL8_NAEGR)

HSP 1 Score: 149 bits (375), Expect = 2.110e-39
Identity = 79/144 (54.86%), Postives = 100/144 (69.44%), Query Frame = 0
Query:    6 VNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQSLSKKGKRIDDPQIVAWANSKVEGSK-IRSFADPSLSTGVFLLKVCHGIDRSVVNWDLVTMEPGSGEDDKLNNAKYAISVARKLGACVFVASEDIVQVKSKMIMLFCASLW 148
            VNVGG DI DGN+K+ L ++WQLMRR  L+ L++L   GK +D+  +VAWANSKV   K I    D SL TGVFL K+C  +  S VN D +T  PG  ++D   NAKYAISVARK+GA VF+  EDI++VK +MI+ F ASLW
Sbjct:  371 VNVGGTDIADGNKKIILGLIWQLMRRSLLDTLKALGG-GKEVDEKDVVAWANSKVTDEKPIDDLNDKSLRTGVFLCKLCAAVRPSAVNLDFIT--PGESDEDAEQNAKYAISVARKIGATVFLLFEDILEVKPRMILSFIASLW 511          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59732.13490.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBI9_ECTSI2.410e-8986.31Fimbrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JJ18_9PHAE1.570e-8083.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YV37_9STRA2.270e-7477.50Actin bundling protein n=1 Tax=Tribonema minus Tax... [more]
A0A836CF36_9STRA1.370e-7275.97Actin binding protein (Fragment) n=1 Tax=Tribonema... [more]
A0A7S2CPJ7_9STRA1.970e-4951.50Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2S2Z4_9STRA9.660e-4651.50Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0YB19_AURAN4.220e-4450.00Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A812Z4F6_SYMMI7.470e-4347.40FIM4 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A812VU38_SYMMI2.140e-4251.30FIM3 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
D2VCL8_NAEGR2.110e-3954.86Actin bundling protein n=1 Tax=Naegleria gruberi T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001715Calponin homology domainSMARTSM00033ch_5coord: 48..150
e-value: 3.1E-9
score: 46.7
IPR001715Calponin homology domainPFAMPF00307CHcoord: 51..150
e-value: 1.3E-14
score: 54.3
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 46..152
score: 17.18
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 1..33
score: 9.439
IPR036872CH domain superfamilyGENE3D1.10.418.10coord: 1..39
e-value: 2.0E-8
score: 36.3
IPR036872CH domain superfamilyGENE3D1.10.418.10coord: 40..148
e-value: 2.5E-29
score: 103.6
IPR036872CH domain superfamilySUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 2..149
NoneNo IPR availablePANTHERPTHR19961:SF18FI19014P1coord: 2..156
IPR039959Fimbrin/PlastinPANTHERPTHR19961FIMBRIN/PLASTINcoord: 2..156
IPR001589Actinin-type actin-binding domain, conserved sitePROSITEPS00020ACTININ_2coord: 5..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig59732contigH-elongata_contig59732:299..2542 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig59732.13490.1mRNA_H-elongata_contig59732.13490.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig59732 287..2542 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig59732.13490.1 ID=prot_H-elongata_contig59732.13490.1|Name=mRNA_H-elongata_contig59732.13490.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=165bp
MGLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQSLSKKGKRIDDP
QIVAWANSKVEGSKIRSFADPSLSTGVFLLKVCHGIDRSVVNWDLVTMEP
GSGEDDKLNNAKYAISVARKLGACVFVASEDIVQVKSKMIMLFCASLWHC
ENERTVSGGAAVGPS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001715CH-domain
IPR036872CH_dom_sf
IPR039959Fimbrin/Plastin
IPR001589Actinin_actin-bd_CS