prot_H-elongata_contig59654.13485.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig59654.13485.1
Unique Nameprot_H-elongata_contig59654.13485.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length161
Homology
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BLAST of mRNA_H-elongata_contig59654.13485.1 vs. uniprot
Match: D7G1U7_ECTSI (CUE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U7_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 1.650e-26
Identity = 80/179 (44.69%), Postives = 89/179 (49.72%), Query Frame = 0 
Query:    1 ANGGNVERTVEHLLGNPTGVSNTGGVGVSGGGAEGRGGTARTDHDAALALQLAREWGDDPTIVPPPPTRPVGIPSPYDRPAAGVSRGIQGGVHTAVGMGSAQQGLIGAAATENRTEGV----------------NGRRGRRVALPENFLRAPGWRAGG--KVSSDPQVAADARLAMMLQ 161
            A+GG+VERTVEHLL NP   S                 +  TDHDAALALQL+REW D+PT +PPPP RP GIP+PY     GV                                                    RRGRRVALPE FLR PGW  GG  +VSSDPQVAADA+LAMMLQ
Sbjct:   31 AHGGHVERTVEHLLSNPQAASGXXXXXXXXXXXXXXXASRGTDHDAALALQLSREWSDEPTNMPPPPVRPQGIPTPY-----GVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDRRGRRVALPEQFLRTPGWTGGGAGEVSSDPQVAADAKLAMMLQ 204
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59654.13485.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1U7_ECTSI1.650e-2644.69CUE domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig59654contigH-elongata_contig59654:223..1871 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig59654.13485.1mRNA_H-elongata_contig59654.13485.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig59654 223..1871 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig59654.13485.1 ID=prot_H-elongata_contig59654.13485.1|Name=mRNA_H-elongata_contig59654.13485.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=161bp
ANGGNVERTVEHLLGNPTGVSNTGGVGVSGGGAEGRGGTARTDHDAALAL
QLAREWGDDPTIVPPPPTRPVGIPSPYDRPAAGVSRGIQGGVHTAVGMGS
AQQGLIGAAATENRTEGVNGRRGRRVALPENFLRAPGWRAGGKVSSDPQV
AADARLAMMLQ
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