prot_H-elongata_contig59650.13484.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig59650.13484.1
Unique Nameprot_H-elongata_contig59650.13484.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length279
Homology
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BLAST of mRNA_H-elongata_contig59650.13484.1 vs. uniprot
Match: A0A6H5JUT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUT0_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 1.690e-37
Identity = 132/254 (51.97%), Postives = 141/254 (55.51%), Query Frame = 0 
Query:   28 KGKARGGGARGGVLDPLDPEGEGYTERPYNLGKQQGPQQRPDP-LGVFGPSQGPETMPPQSSSGNPAAKTTVGESGGSGTLGPIQGPARPPGLKASATVSEAVLRMKPTHLRVHRPSGPRXXXXXXXXXXXXXXXXXXXXVVRRRASPSEKVAFSVPRPAGTAFLTPRSTRSGPGAGASSSSRDLGALSXXXXXXXXXXXXXAVS--AAHGXXXXXASKAVSRRTAKEPVETKKAGVNQEYDSFMEEMKGLGAF 278
            +GK RGG  R G +DPLDPE  GYTERPYNL KQ GPQQR       FGPSQGP                    + GSGTLGP+QGP+RP    A   VSE +LRMKP HLRV RP G       XXXXXXX           R           VPRPAG AFLTPR  R  PGAGA  ++  + A SXXXXXXXXXXXXX     AA       A  A S          KKAGVNQEYDSFMEEMKGLGAF
Sbjct:  152 EGKGRGGAGRSGPVDPLDPEAAGYTERPYNLNKQGGPQQRGGAQAAAFGPSQGPAXXXXXXXXXXXXXXXXXSGAAGSGTLGPVQGPSRPAPKPA---VSEDLLRMKPVHLRVQRPGGVSRAAGGXXXXXXXPG---------RXXXXXXXXXXXVPRPAGAAFLTPRGARPRPGAGAGRTAAMMSASSXXXXXXXXXXXXXXXXXXAAGAAATAAAPAARSXXXXXXXXXEKKAGVNQEYDSFMEEMKGLGAF 393
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59650.13484.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JUT0_9PHAE1.690e-3751.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig59650contigH-elongata_contig59650:221..3376 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig59650.13484.1mRNA_H-elongata_contig59650.13484.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig59650 162..3653 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig59650.13484.1 ID=prot_H-elongata_contig59650.13484.1|Name=mRNA_H-elongata_contig59650.13484.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=279bp
MAGTAATPIGVYGPGQALSSGGEGLRGKGKARGGGARGGVLDPLDPEGEG
YTERPYNLGKQQGPQQRPDPLGVFGPSQGPETMPPQSSSGNPAAKTTVGE
SGGSGTLGPIQGPARPPGLKASATVSEAVLRMKPTHLRVHRPSGPRGTST
TSAAAAAARGGLGGVGVVRRRASPSEKVAFSVPRPAGTAFLTPRSTRSGP
GAGASSSSRDLGALSSVPRPASATFLKPAVSAAHGGGGGGASKAVSRRTA
KEPVETKKAGVNQEYDSFMEEMKGLGAF*
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