prot_H-elongata_contig596.13473.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig596.13473.1
Unique Nameprot_H-elongata_contig596.13473.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length129
Homology
BLAST of mRNA_H-elongata_contig596.13473.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 1.320e-27
Identity = 60/132 (45.45%), Postives = 87/132 (65.91%), Query Frame = 0
Query:    2 SLGLADDIAEVSFRKNSLFCVSGEYGFE---SSSEGSDTCRIEVVCSCCNIKCNEVSGSITL-DESTVPVCEVVPTGVNQTKTN-MTVDTLELLQGYYRTSNQSQDVRECYKSEACIGGSNASNYCAQGYTG 128
            SLG+A +I + +F  N+ +C SG+YG+E      E S TCR  VVCS C   C +  GS+ + +++ VP+CE   TGV+ +    +T+  L LL+GYYRTS +SQ+V +CY+ EACIGG++ S YC +GY G
Sbjct:  523 SLGIAGNITDTTFESNTYYCSSGQYGYEYEIGEDEVSGTCRFGVVCSSCAASCEDNPGSVVVVNDAHVPICETAMTGVDTSGDGGVTLPELNLLRGYYRTSAESQNVLKCYQEEACIGGTDVSQYCQEGYRG 654          
BLAST of mRNA_H-elongata_contig596.13473.1 vs. uniprot
Match: D7FWD7_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD7_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 6.020e-27
Identity = 55/128 (42.97%), Postives = 81/128 (63.28%), Query Frame = 0
Query:    2 SLGLADDIAEVSFRKNSLFCVSGEYGFESSSEGSDTCRIEVVCSCCNIKCNEVSGSITLDESTVPVCEVVPTGVNQTKTNMTVDTLELLQGYYRTSNQSQDVRECYKSEACIGGSNASNYCAQGYTGP 129
            S+G+      V+F  N+L C  GEY ++  +E  D+CR E+ C+ C+  C+ +  S+T+ +ST+PVC  +  G   + +  TV TL+L +GYYRTS +SQ V ECY + AC GG++  NYCA GY GP
Sbjct:  259 SIGVVQQALNVTFASNTLNCPLGEYAYDKEAED-DSCRFELACARCSADCDAIPSSVTMADSTIPVCLELMEGTKASSSGTTVATLDLQEGYYRTSAESQVVVECYLTGACAGGTDPENYCADGYEGP 385          
BLAST of mRNA_H-elongata_contig596.13473.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 1.010e-25
Identity = 54/128 (42.19%), Postives = 79/128 (61.72%), Query Frame = 0
Query:    2 SLGLADDIAEVSFRKNSLFCVSGEYGFESSSEGSDTCRIEVVCSCCNIKCNEVSGSITLDESTVPVCEVVPTGVNQTKTNMTVDTLELLQGYYRTSNQSQDVRECYKSEACIGGSNASNYCAQGYTGP 129
            S+G+      V+F  N+L C  GE  ++  +E  D+CR E+ C+ C+  C+ +  S+T+ +ST+PVC     G   + +  TV TL+L +GYYRTS +SQ V ECY + AC GG++  NYCA GY GP
Sbjct:  500 SMGVVQKALNVAFASNTLNCPPGENAYDKEAED-DSCRFELACARCSADCDAIPSSVTMADSTIPVCVESMEGTKASSSGTTVATLDLQEGYYRTSAESQVVVECYLTSACAGGTDPKNYCADGYEGP 626          
BLAST of mRNA_H-elongata_contig596.13473.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 1.390e-20
Identity = 50/120 (41.67%), Postives = 69/120 (57.50%), Query Frame = 0
Query:   17 NSLFCVSGEYGFESSSE-----GSDTCRIEVVCSCCNIKCNEV--SGSITLDESTVPVCEVVPTGVNQTKTNMTVDTLELLQGYYRTSNQSQDVRECYKSEACIGGSNASNYCAQGYTGP 129
            N  +C  GE+G E+  +     G+D CR   VCS C  +C+    S +  +D  T+P CE  P G   T+   T+ TLE+L G+YR+S  S D+REC+  +AC GGS    YCA+GY GP
Sbjct:  514 NDFYCEEGEFGTETLIDKDLFGGADQCRFGRVCSRCASECDSELESAAELVDAETLPTCEEAPEGSRTTRRGATLATLEILPGFYRSSETSTDIRECFHKQACEGGSAVGTYCAEGYIGP 633          
BLAST of mRNA_H-elongata_contig596.13473.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 8.910e-20
Identity = 50/120 (41.67%), Postives = 70/120 (58.33%), Query Frame = 0
Query:   17 NSLFCVSGEYGFESSSE-----GSDTCRIEVVCSCCNIKC-NEVSGSITL-DESTVPVCEVVPTGVNQTKTNMTVDTLELLQGYYRTSNQSQDVRECYKSEACIGGSNASNYCAQGYTGP 129
            N  +C  GE+G E+  +     G+D CR   VCS C  +C +E+  +  L D  T+P CE  P G   T+   T+ TLE+L G+YR+S  S D+REC+  +AC GGS    YC++GY GP
Sbjct:  490 NDFYCEEGEFGTETLIDKDLFGGADQCRFRRVCSRCASECGSELERTAELVDADTLPTCETAPEGSRTTRRGATLATLEVLPGFYRSSETSTDIRECFHKKACDGGSAIGTYCSEGYIGP 609          
BLAST of mRNA_H-elongata_contig596.13473.1 vs. uniprot
Match: A0A7S4MJB6_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4MJB6_9EUKA)

HSP 1 Score: 61.2 bits (147), Expect = 2.360e-8
Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = 0
Query:   68 CEVVPTGVNQTKTNMTVDTLELLQGYYRTSNQSQDVRECYKSEACIGGSNA-SNYCAQGYTGP 129
            C   P G + +    +++TL L  G++RT NQS+DVREC+ S+ACIG  NA S+ CA G+ GP
Sbjct:  139 CTACPHGADCSTQGTSLETLPLKAGFWRTGNQSEDVRECFTSDACIGSCNATSSVCADGHLGP 201          
BLAST of mRNA_H-elongata_contig596.13473.1 vs. uniprot
Match: A0A7S2VWR0_9STRA (Hypothetical protein n=2 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VWR0_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 2.730e-7
Identity = 27/62 (43.55%), Postives = 41/62 (66.13%), Query Frame = 0
Query:   68 CEVVPTGVNQTKTNMTVDTLELLQGYYRTSNQSQDVRECYKSEACIGGSNASNYCAQGYTGP 129
            C  +  G+      +T++TL L  G++RTSN S D+REC  + AC+GG N++N C +G+TGP
Sbjct:  181 CVEIVEGIRNDIEGLTLETLTLFPGWWRTSNTSDDIRECIIAGACLGG-NSTNMCREGHTGP 241          
BLAST of mRNA_H-elongata_contig596.13473.1 vs. uniprot
Match: A0A7R9U892_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U892_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 7.830e-7
Identity = 27/60 (45.00%), Postives = 37/60 (61.67%), Query Frame = 0
Query:   67 VCEVVPTGVNQTKTNMTVDTLELLQGYYRTSNQSQDVRECYKSEACIGGSNASNYCAQGY 126
            VCE    GV        +  L LL G++R+  QS DVREC + +AC+GG+NA +YCA G+
Sbjct:   13 VCETCGEGVVCNDFGNKLTNLTLLPGFWRSGRQSTDVRECIERDACVGGTNADDYCAPGH 72          
BLAST of mRNA_H-elongata_contig596.13473.1 vs. uniprot
Match: A0A7R9U1A3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1A3_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 1.060e-6
Identity = 24/60 (40.00%), Postives = 38/60 (63.33%), Query Frame = 0
Query:   67 VCEVVPTGVNQTKTNMTVDTLELLQGYYRTSNQSQDVRECYKSEACIGGSNASNYCAQGY 126
            VC     G+        + TL+L +GY+R+   S D+R+C   +AC+GG++ASNYCA+G+
Sbjct:   13 VCVFCGEGLTCNSFGNVLPTLQLQRGYWRSGPMSGDIRDCISRDACVGGTDASNYCAEGH 72          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig596.13473.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5JWI3_9PHAE1.320e-2745.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWD7_ECTSI6.020e-2742.97Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
A0A6H5JSF5_9PHAE1.010e-2542.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTT9_ECTSI1.390e-2041.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L324_9PHAE8.910e-2041.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4MJB6_9EUKA2.360e-847.62Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A7S2VWR0_9STRA2.730e-743.55Hypothetical protein n=2 Tax=Triparma pacifica Tax... [more]
A0A7R9U892_9STRA7.830e-745.00Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7R9U1A3_9STRA1.060e-640.00Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig596contigH-elongata_contig596:3219..4059 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig596.13473.1mRNA_H-elongata_contig596.13473.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig596 2923..4059 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig596.13473.1 ID=prot_H-elongata_contig596.13473.1|Name=mRNA_H-elongata_contig596.13473.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=129bp
MSLGLADDIAEVSFRKNSLFCVSGEYGFESSSEGSDTCRIEVVCSCCNIK
CNEVSGSITLDESTVPVCEVVPTGVNQTKTNMTVDTLELLQGYYRTSNQS
QDVRECYKSEACIGGSNASNYCAQGYTGP
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