prot_H-elongata_contig59378.13450.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig59378.13450.1
Unique Nameprot_H-elongata_contig59378.13450.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length226
Homology
BLAST of mRNA_H-elongata_contig59378.13450.1 vs. uniprot
Match: D8LS75_ECTSI (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS75_ECTSI)

HSP 1 Score: 366 bits (939), Expect = 2.730e-123
Identity = 178/226 (78.76%), Postives = 207/226 (91.59%), Query Frame = 0
Query:    1 RYRPRVRVVRVTGRSMCNAYFLKNREKVSNLRSDSLALLLSHANVFAGCQALVLDTCMGVVTAAILERMACRGRVIALYAQSQPSMDAVRKFDHPEADLVRCLLPLHTSELGKLSVPEEEREPDPLEDGGVGDTRTEEEALEEYNTFMDEHGVSEKDRSIKIEKKIARMRRNRMKPPPRQVRDWLRQGCDCLVIAGKYDPLTAVEAMLPHLSPSRPFTVYSEFVEV 226
            +YRPRVRVVRVTGR+MC+AYF KNREKVSNLRSD+LAL+L+HANVFAGCQALVLDTCMGVVTAA+LERM C+GR+ ALYAQSQPSMDAVRKFDH E +L++CLLPLHTSELG+LS+PE ERE DP++DGG GD+RTEEEAL EY T MD+HGV EKDR  +IE+K+ARMRRN+ +P PRQVRDWLRQGCDCLVIA K+DP+ AV+AMLPHL+PSRPF +YSEF+EV
Sbjct:  177 KYRPRVRVVRVTGRTMCDAYFAKNREKVSNLRSDALALVLTHANVFAGCQALVLDTCMGVVTAAMLERMGCQGRIFALYAQSQPSMDAVRKFDHAEKNLLKCLLPLHTSELGRLSIPESEREADPVDDGGPGDSRTEEEALAEYRTVMDDHGVPEKDRPARIERKLARMRRNKHRPAPRQVRDWLRQGCDCLVIACKFDPIAAVDAMLPHLTPSRPFAIYSEFIEV 402          
BLAST of mRNA_H-elongata_contig59378.13450.1 vs. uniprot
Match: A0A7S2FBR9_9STRA (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FBR9_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.570e-45
Identity = 96/220 (43.64%), Postives = 139/220 (63.18%), Query Frame = 0
Query:    1 RYRPRVRVVRVTGRSMCNAYFLKNREKVSNLRSDSLALLLSHANVFAGCQALVLDTCMGVVTAAILERMACRGRVIALYAQSQPSMDAVRKFDHPEADLVRCLLPLHTSELGKLSVPEEEREPDPLEDGGVGDTRTEEEALEEYNTFMDEHGVSEKDRSIK---IEKKIARMRRNRMKPPPRQVRDWLRQGCDCLVIAGKYDPLTAVEAMLPHLSPSRPF 217
            ++ PRVR++R    S+C  YFLKN EKV+NLR DSLA +L+++NV+AGCQALV DTCMGVV AA  +R+   GR++A +A  Q   DA+++F+  E      ++P HT+E+GKL  PEEE EPD   +      R     ++ Y  F+ E   +  D + K   ++++ AR+RR   KP P  VR+WLR   D L+IA +++PL  +  +LP L+PS PF
Sbjct:   19 KHAPRVRLLRCDVASVCETYFLKNTEKVNNLRPDSLAQVLAYSNVYAGCQALVFDTCMGVVVAACADRLDGHGRILAAFAGQQHHFDAMKRFNFSERQEA-VVVPFHTTEIGKLVEPEEE-EPDESPEAVEARARV---LIDTYPEFVVEKMATLTDEAKKNEYLQRREARIRRQCAKPLPGSVRNWLRHTSDSLIIATEFNPLAVLLELLPLLAPSAPF 233          
BLAST of mRNA_H-elongata_contig59378.13450.1 vs. uniprot
Match: A0A7S2DYA4_9STRA (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DYA4_9STRA)

HSP 1 Score: 151 bits (381), Expect = 1.340e-39
Identity = 89/228 (39.04%), Postives = 138/228 (60.53%), Query Frame = 0
Query:    1 RYRPRVRVVRVTGRSMCNAYFLKNREKVSNLRSDSLALLLSHANVFAGCQALVLDTCMGVVTAAILERMACRGRVIALYAQSQPSMDAVRKFDHPEADLVRCLLPLHTSELGKLSVPEEEREPDPLEDGGVGDTRTEEEALEEYNTFMDEHGVS---EKDRSIKIEKKIARMRRNRMKPPPRQVRDWLRQGCDCLVIAGKYDPLTAVEAMLPHLSPSRPFTVYSEFVE 225
            ++ PRVR+V     S+C+ Y+ KNRE+VSNLRSDSLA +L++ NVFAG   LV DT MG+V ++++ER+   GR++A YA  Q + DAV+  +         L+P HTSEL K+         + ++D         ++ +EE   F+ E   S   E +R+  ++++  R++R   +P P  VR+WLRQ CD L+IA ++ PLT +  +LP L+ S PF ++ EF+E
Sbjct:  164 KHTPRVRLVLCEAESVCDTYYQKNRERVSNLRSDSLAQILAYGNVFAGGNVLVFDTVMGLVVSSVVERLGGHGRLLAAYAGKQAAFDAVKHMNFTSRQS-SVLVPFHTSELAKVRGDAAMAAFEDVDDSPEAVAARAKKLIEERPAFVTEKLASLTEESERAAYLKRRADRIKRQTARPSPGTVRNWLRQQCDSLIIATEFHPLTVLLELLPVLAFSAPFVIFCEFLE 390          
BLAST of mRNA_H-elongata_contig59378.13450.1 vs. uniprot
Match: A0A662WG54_9STRA (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WG54_9STRA)

HSP 1 Score: 140 bits (353), Expect = 5.250e-36
Identity = 92/230 (40.00%), Postives = 123/230 (53.48%), Query Frame = 0
Query:    1 RYRPRVRVVRVTGRSMCNAYFLKNREKVSNLRSDSLALLLSHANVFAGCQALVLDTCMGVVTAAILERMACRGRVIALYAQSQPSMDAVRKFDHPEADLVRCLLPLHT---SELGKLSVPEEER-EPDPLEDGGVGDTRTEEEALEEYNTFMDEHGVSEKDRSIK-IEKKIARMRRNRMKPPPRQVRDWLRQGCDCLVIAGKYDPLTAVEAMLPHLSPSRPFTVYSEFVE 225
            +Y PRVR +R T  S+C  Y LKN  K+ NLR DSL  +L +AN+FAG Q LV+DTCMG+VT AI ER    GR++  Y   QP+ D +R+F+       R L  +H     E+  L +PEE   EP  +   G+     E  A E    F             + +EKKI R        P   +R W+R+  D LVIA  YDP   + A+LP+L  S+PF +YSEF+E
Sbjct:   99 KYMPRVRFLRCTAESLCRTYRLKNPAKICNLREDSLGQMLVYANIFAGGQVLVVDTCMGLVTGAIAERQGGSGRILCPYDGQQPAADILRRFNFGTQCYKRTLESIHYMPFKEIRLLELPEETVVEPPKVARDGLTPEERERMATERAKGFXXXXXXXXXXXXXRRLEKKIQRQ-------PSATIRQWVRETSDSLVIAANYDPEQVLLALLPYLGRSKPFVIYSEFLE 321          
BLAST of mRNA_H-elongata_contig59378.13450.1 vs. uniprot
Match: A0A7S2RMG0_9STRA (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RMG0_9STRA)

HSP 1 Score: 137 bits (345), Expect = 2.610e-35
Identity = 85/225 (37.78%), Postives = 129/225 (57.33%), Query Frame = 0
Query:    7 RVVRVTGRSMCNAYFLKNREKVSNLRSDSLALLLSHANVFAGCQALVLDTCMGVVTAAILERMACRGRVIALYAQSQPSMDAVRKFDHPEADLVRCLLPLHTSELGKLSVPEEEREPDPLEDGGVGDTRTEEEALEEYNTFMD------EHGVSEKDRSIKIEKKIARMRRNRMKPPPRQVRDWLRQGCDCLVIAGKYDPLTAVEAMLPHLSPSRPFTVYSEFVE 225
            RV+R  G S+C +Y++K  E+V NLR D+LA +L++ NVFAG Q L +D+CMGVV A+I+ER+   GR +  +A+S P++DAV KF+     ++  L+  HTSE GKL+ PE      P  D        E +  +   T  D      +   +E+D+   +  +  R+RR   KP P  +R+W+R   D L+IA  Y P T    ++  L P+ PF V+SE++E
Sbjct:    1 RVLRCEGASVCESYYMKFPERVCNLRPDALAQILAYGNVFAGAQILCMDSCMGVVAASIVERLGGYGRCLNAFAESNPNLDAVNKFNFSPR-MLSSLVSFHTSEFGKLATPEL-----PDADLDHSSEAVERKIRDSLATMPDLTKQKLQSLKTEEDKQAFLAAREKRIRRACAKPQPGVIRNWIRAQSDSLIIATAYHPKTVFFELVQWLKPACPFVVFSEYIE 219          
BLAST of mRNA_H-elongata_contig59378.13450.1 vs. uniprot
Match: W2PH38_PHYPN (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=3 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PH38_PHYPN)

HSP 1 Score: 138 bits (347), Expect = 4.260e-35
Identity = 89/229 (38.86%), Postives = 121/229 (52.84%), Query Frame = 0
Query:    1 RYRPRVRVVRVTGRSMCNAYFLKNREKVSNLRSDSLALLLSHANVFAGCQALVLDTCMGVVTAAILERMACRGRVIALYAQSQPSMDAVRKFDHPEADLVRCLLPLHTSELGKLSVPEEERE----PDPLEDGGVGDTRTEEEALEEYNTFMDEHGVSEKDRSIKIEKKIARMRRNRMKPPPRQVRDWLRQGCDCLVIAGKYDPLTAVEAMLPHLSPSRPFTVYSEFVE 225
            +Y PRVR +R T  S+C  Y LKN  K+ NLR DSL  +L + N+FAG Q LV+DTCMG+VT AI ER    GR+I  Y   QP+ D +R+F+  +    R L  +H     ++ + E E E    P  +   G+     E+ A E    F               EKK  R +    +  P  +R+W R+  D LVIA  YDP   + A+LP+L  S+PF VYSEF+E
Sbjct:  107 KYMPRVRFLRCTAESLCRTYRLKNPAKICNLREDSLGQILVYGNIFAGGQVLVVDTCMGLVTGAIAERQGGSGRIICPYEGQQPAADILRRFNFDK----RTLESIHYMPFKQVRLLEMEEEDVVEPAKVARDGLTPEEREQLAAERAKNFTPXXXXRY------AEKKARREQTKLFRQKPSTIREWAREKSDSLVIAASYDPEEVLMALLPYLGRSKPFVVYSEFLE 325          
BLAST of mRNA_H-elongata_contig59378.13450.1 vs. uniprot
Match: G4YI76_PHYSP (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=4 Tax=Phytophthora TaxID=4783 RepID=G4YI76_PHYSP)

HSP 1 Score: 137 bits (346), Expect = 5.750e-35
Identity = 91/229 (39.74%), Postives = 123/229 (53.71%), Query Frame = 0
Query:    1 RYRPRVRVVRVTGRSMCNAYFLKNREKVSNLRSDSLALLLSHANVFAGCQALVLDTCMGVVTAAILERMACRGRVIALYAQSQPSMDAVRKFDHPEADLVRCLLPLHT---SELGKLSVPEEER-EPDPLEDGGVGDTRTEEEALEEYNTFMDEHGVSEKDRSIKIEKKIARMRRNRMKPPPRQVRDWLRQGCDCLVIAGKYDPLTAVEAMLPHLSPSRPFTVYSEFVE 225
            +Y PRVR +R T  S+C  Y LKN  K+ NLR DSL  +L ++N+FAG Q LV+DTCMG+VT AI ER    GR+I  Y   QP+ D +R+F+  +    R L  +H     ++  L + EEE  EP  +   G+     E  A E    F  +       +    EKK  R      +  P  +R W R+  D LVIA  YDP   + A+LP+L  S+PF VYSEF+E
Sbjct:  158 KYMPRVRFLRCTAESLCRTYRLKNPAKICNLREDSLGQVLVYSNIFAGGQVLVVDTCMGLVTGAIAERQGGSGRIICPYEGQQPAADILRRFNFDK----RTLESIHYMPFKQVRMLELKEEEVVEPPKVARDGLTPEERERLAAERAKNFTPQQ------QKRYAEKKARRADTKLNRQSPSTIRQWAREKSDSLVIAANYDPEEVLMALLPYLGRSKPFVVYSEFLE 376          
BLAST of mRNA_H-elongata_contig59378.13450.1 vs. uniprot
Match: A0A0W8CAK1_PHYNI (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=14 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CAK1_PHYNI)

HSP 1 Score: 138 bits (347), Expect = 8.910e-35
Identity = 89/229 (38.86%), Postives = 121/229 (52.84%), Query Frame = 0
Query:    1 RYRPRVRVVRVTGRSMCNAYFLKNREKVSNLRSDSLALLLSHANVFAGCQALVLDTCMGVVTAAILERMACRGRVIALYAQSQPSMDAVRKFDHPEADLVRCLLPLHTSELGKLSVPEEERE----PDPLEDGGVGDTRTEEEALEEYNTFMDEHGVSEKDRSIKIEKKIARMRRNRMKPPPRQVRDWLRQGCDCLVIAGKYDPLTAVEAMLPHLSPSRPFTVYSEFVE 225
            +Y PRVR +R T  S+C  Y LKN  K+ NLR DSL  +L + N+FAG Q LV+DTCMG+VT AI ER    GR+I  Y   QP+ D +R+F+  +    R L  +H     ++ + E E E    P  +   G+     E+ A E    F               EKK  R +    +  P  +R+W R+  D LVIA  YDP   + A+LP+L  S+PF VYSEF+E
Sbjct:  165 KYMPRVRFLRCTAESLCRTYRLKNPAKICNLREDSLGQILVYGNIFAGGQVLVVDTCMGLVTGAIAERQGGSGRIICPYEGQQPAADILRRFNFDK----RTLESIHYMPFKQVRLLEMEEEDVVEPAKVARDGLTPEEREQLAAERAKNFTPXXXXRY------AEKKARREQTKLFRQKPSTIREWAREKSDSLVIAANYDPEEVLMALLPYLGRSKPFVVYSEFLE 383          
BLAST of mRNA_H-elongata_contig59378.13450.1 vs. uniprot
Match: M4C2Z9_HYAAE (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C2Z9_HYAAE)

HSP 1 Score: 138 bits (347), Expect = 1.700e-34
Identity = 88/227 (38.77%), Postives = 125/227 (55.07%), Query Frame = 0
Query:    1 RYRPRVRVVRVTGRSMCNAYFLKNREKVSNLRSDSLALLLSHANVFAGCQALVLDTCMGVVTAAILERMACRGRVIALYAQSQPSMDAVRKFDHPEADLVRCLLPLHTSELGKLSVPEEE-REPDPLEDGGVGDTRTEEEALEEYNTFMDEHGVSEKDRSIKIEK-KIARMRRNRMKPPPRQVRDWLRQGCDCLVIAGKYDPLTAVEAMLPHLSPSRPFTVYSEFVE 225
            +Y PRVR +R T  S+C  Y LKN  K+ NLR D+L  +L + N+FAG Q LV+DTCMG+VT A+ ER    GR+I  Y   QPS D +R+F+  +  L   +  L   ++  L + EEE  EP  +   G+   + E  A E    F  E      D+  + E+ K++  +       P  +R W R+  D LVIA  Y+P   + A+LP+L  S+PF VYSEF+E
Sbjct:  160 KYMPRVRFLRCTAESLCRTYRLKNPSKICNLREDTLGQILVYGNIFAGAQVLVVDTCMGLVTGAVAERQGGSGRLICPYEGQQPSADILRRFNFDKLTL-ESIHYLPFKQVRLLGLKEEEVLEPKKVARDGLSQEQRERLAAERAKNFTPEQQKHYADKKARREETKLSHQK-------PSVIRQWAREKSDSLVIAANYNPEAILMALLPYLGRSKPFVVYSEFLE 378          
BLAST of mRNA_H-elongata_contig59378.13450.1 vs. uniprot
Match: A0A5D6XMH0_9STRA (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMH0_9STRA)

HSP 1 Score: 134 bits (337), Expect = 2.590e-33
Identity = 90/226 (39.82%), Postives = 127/226 (56.19%), Query Frame = 0
Query:    1 RYRPRVRVVRVTGRSMCNAYFLKNREKVSNLRSDSLALLLSHANVFAGCQALVLDTCMGVVTAAILERMACRGRVIALYAQSQPSMDAVRKFDHPEADLVRCLLPLHTSELGKLSVPEEEREPDPLEDGGVGDTRTEEEALEEYNTFMDEHGVSEKDRSIKIEKKIARMRRNRMKPPPRQV-RDWLRQGCDCLVIAGKYDPLTAVEAMLPHLSPSRPFTVYSEFVE 225
            +Y PRV+ ++ T  S+C  Y LKN  K  NLR DSL  +L +ANVFAG Q LV+DTCMG+V  AI ER A  GR++A Y   QPS+D +R+F+  +      +      ++  L+V E +    PL     G T  E EA       +        D+  + E K AR + N++K  P  V R+W+R   D LV+A  YDP   + A+LP+L+ S+PF VYSE++E
Sbjct:  160 KYMPRVQFLKCTAESLCRTYRLKNPLKTCNLREDSLGQMLVYANVFAGAQVLVVDTCMGLVIGAIAERQAGHGRILAGYEGQQPSVDILRRFNFDKRTH-ESIKYFSFKDVANLAVLETDVVEPPLAPPRDGLTPAEREAA-----MVARLAGFTADQRKRYEAKKARNQVNKVKREPAAVVREWVRAKSDALVVASSYDPERVLLALLPYLACSKPFVVYSEYLE 379          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59378.13450.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS75_ECTSI2.730e-12378.76tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
A0A7S2FBR9_9STRA1.570e-4543.64tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
A0A7S2DYA4_9STRA1.340e-3939.04tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
A0A662WG54_9STRA5.250e-3640.00tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
A0A7S2RMG0_9STRA2.610e-3537.78tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
W2PH38_PHYPN4.260e-3538.86tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
G4YI76_PHYSP5.750e-3539.74tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
A0A0W8CAK1_PHYNI8.910e-3538.86tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
M4C2Z9_HYAAE1.700e-3438.77tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
A0A5D6XMH0_9STRA2.590e-3339.82tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017423tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6PFAMPF04189Gcd10pcoord: 1..121
e-value: 1.3E-23
score: 83.6
IPR017423tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6PANTHERPTHR12945TRANSLATION INITIATION FACTOR EIF3-RELATEDcoord: 1..225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig59378contigH-elongata_contig59378:451..3589 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig59378.13450.1mRNA_H-elongata_contig59378.13450.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig59378 451..3589 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig59378.13450.1 ID=prot_H-elongata_contig59378.13450.1|Name=mRNA_H-elongata_contig59378.13450.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=226bp
RYRPRVRVVRVTGRSMCNAYFLKNREKVSNLRSDSLALLLSHANVFAGCQ
ALVLDTCMGVVTAAILERMACRGRVIALYAQSQPSMDAVRKFDHPEADLV
RCLLPLHTSELGKLSVPEEEREPDPLEDGGVGDTRTEEEALEEYNTFMDE
HGVSEKDRSIKIEKKIARMRRNRMKPPPRQVRDWLRQGCDCLVIAGKYDP
LTAVEAMLPHLSPSRPFTVYSEFVEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017423TRM6