prot_H-elongata_contig5937.13448.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5937.13448.1
Unique Nameprot_H-elongata_contig5937.13448.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length536
Homology
BLAST of mRNA_H-elongata_contig5937.13448.1 vs. uniprot
Match: A0A6H5KC67_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC67_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 4.650e-27
Identity = 102/288 (35.42%), Postives = 136/288 (47.22%), Query Frame = 0
Query:    4 NPNARLISIMGEPGLGKTARAEKVCEYVRDRRRFDKIFVVRC-RGLVDEGSRDL-----RPTPGAGHLKHIEYLCRLIGSAIGMPAREPTSPVALHDFLVNSSVTSGDEVQPKVLLFLDDADSLFYSRGCEARDSLVDLFDKLFRRSS--HIWILQTVEQHPLDRATKCVHNTGHKVRICLPLLLVRVCKTCEVKPLGNEDAARLLIHLYPRDGRGFKFEELGVPRGS-SMADCPSMMVNHPVLE----LVGGHPGTLVSLSSHLREFSLIDDFRSHREAFRDRSSLR 278
            +P    +++ GEPG GKT  A + C+YVR+R  FD      C +  +D            P   +G    +E LCRLIG AIGMP   P++   LH F+  +  T   +   KVLL LD+ DSLF  R  +A+D LV L   L       H+ +L T E + L R           V                VKPL  + A+ LL+   PRD    + EELG+  G  S AD  S + NHPVL+    + GGHPGTLV L+  L   SL D  +    A + R+S R
Sbjct:  259 DPQTVCVTVTGEPGSGKTELAIQACDYVRERHHFDSFLWADCDKAALDACPETFFVIPNSPNGASGDSVSLEDLCRLIGVAIGMPQPGPSTANELHQFIFKNPNTDSGQPFQKVLLVLDNVDSLF-ERDEDAQDRLVHLLSDLCSMGGGGHLKLLATSE-YKLLRGNGYFRGGSEMV--------------ATVKPLKMQHASELLMDNSPRD---LQPEELGLQSGGFSKADVVSAVENHPVLKEVLKIAGGHPGTLVRLAPVLLHGSLNDARKLKEVATKCRASFR 527          
BLAST of mRNA_H-elongata_contig5937.13448.1 vs. uniprot
Match: D7FNY4_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY4_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 1.460e-25
Identity = 97/268 (36.19%), Postives = 124/268 (46.27%), Query Frame = 0
Query:    7 ARLISIMGEPGLGKTARAEKVCEYVRDRRRFDKIFVVRC-----RGLVDEGSRDLRPTPGAGHLKHIEYLCRLIGSAIGMPAREPTSPVALHDFLVNSSVTSGDEVQPKVLLFLDDADSLFYSRGCEARDSLVDLFDKL--FRRSSHIWILQTVEQHPLDRATKCVHNTGHKVRICLPLLLVRVCKTCEVKPLGNEDAARLLIHLYPRDGRGFKFEELGVPRGS-SMADCPSMMVNHPVL----ELVGGHPGTLVSLSSHLREFSLID 262
            A  ++I GEPG GKT RA + C+YVR+R RFD      C         D+        P        E  CRLIG AIGMP   PTS   LH F+ N+  T   +   KVLL LD+ DSL    G +A+D LV L   L       H+ +L T E   L    +    T    R               V+PL    A+ LL+   PR+    +  ELG+  G  S+AD  + + NHPVL    E+  GHPGTLV L+  L + SL D
Sbjct:  165 AACVTITGEPGSGKTERAIQACDYVRERHRFDCFLWADCDKAALNSCSDKSGNPFFALPTCLKDSAWEDPCRLIGLAIGMPQPGPTSEQELHQFIFNNPNTDSGQPFQKVLLVLDNVDSLLERDG-DAQDRLVQLLCNLCSIGDGGHLKLLATSEHKLLSGHERFRGGTETVAR---------------VEPLETRHASELLMDNLPRN---LELTELGLESGGLSLADVLTAVQNHPVLKEVLEIAEGHPGTLVRLAPVLLDGSLDD 413          
BLAST of mRNA_H-elongata_contig5937.13448.1 vs. uniprot
Match: D7FNY6_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY6_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 1.540e-23
Identity = 104/305 (34.10%), Postives = 139/305 (45.57%), Query Frame = 0
Query:    7 ARLISIMGEPGLGKTARAEKVCEYVRDRRRFDKIFVVRC-RGLVDEGSRDL------------RPTPGAGHLKHIEYLCRLIGSAIGMPAREPTSPVALHDFLVNSSVTSGDEVQPKVLLFLDDADSLFYSRGCEARDSLVDLFDKLFRRSS--HIWILQTVEQHPLDRATKCVHNTGHKVRICLPLLLVRVCKTCEVKPLGNEDAARLLIHLYPRDGRGFKFEELGVPRGS-SMADCPSMMVNHPVL----ELVGGHPGTLVSLSSHLREFSLIDDFR------SHREAFRDRSSLRFCEQRAG 285
            A  +++ G+PG GKT  A + C+YVR R  F+      C +  +D    +L             P   +G     E LCR IG AIG+P   P++   LH F+  +  T   +   KVLL LD+ DSL   RG +A+D LV L   L       H+ +L T E + L    +  H    +V               EV+PL    A+ LLI   PRD    + EELG+  G  S A   S   NHPVL    E+ GGHPGTLV L+  L    L D  +      S R  FRD+S  R   +R+G
Sbjct:  278 AACVTVTGDPGSGKTELAIQACDYVRYRHHFNSFLWADCDKAALDASPYNLVSSADRFYVLPNSPNGASGDSVSSEDLCRQIGVAIGIPQPGPSTTNELHQFIFPN--TDSGQPSQKVLLVLDNVDSLL-ERGGDAQDRLVHLLGDLCSMGGGGHLKLLATSE-YKLLSGNEVFHGGTERV--------------AEVEPLETRHASELLIDNSPRD---LQPEELGLQSGGLSKAHVVSAAQNHPVLKEVLEIAGGHPGTLVRLAPVLLNGPLDDACKLKEMATSCRADFRDKSYRRRGHRRSG 561          
BLAST of mRNA_H-elongata_contig5937.13448.1 vs. uniprot
Match: D7FNX8_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX8_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 3.470e-22
Identity = 100/342 (29.24%), Postives = 149/342 (43.57%), Query Frame = 0
Query:  281 EQRAGEIAVKHGIRSEQCKGVWVKAAKQSA------EGAQGLCSYGPRW------------YESVQLDFLLRQLEQHLYEVQT----GNNINNEPSPGIIYSRLSV-YGVTSGQERMSSTMRPRCMGPEDLNFVQSILRST--------EKQQWEGRSSNF------------------------------HHNIISIEAFRTFWEWWEETTKLISRVMYEWASTTPVKIHGFVSREEAERKLLGKKLGTFLIRFSVTNPGQISISYENRGN------------------------VEHCLVNVIQGGAW-----EYNTQV-YPKLQDLVKACSSLQNVYSD 531
            E+RA + A   G+    C+ VWVKA   +       +G  G  + G  W            Y+ V  D+L R L QHL    T     + + +E   G      SV  GV +G   ++ T + R M  E+L FV+ +L++         EK + +  S  +                                ++IS++AF  F  WW      +S +  +WAST P ++HGF+SR  AER+LL ++ GTFL+RFS + PG++ +S+                             V+HCLV V +GG W     E  ++V YP L DLV ACSS+Q +Y D
Sbjct:  594 EKRAWDTARTAGLMDRGCRLVWVKATTNALLNGWTYDGGGGSDNGGFGWPAEGAGAGGVTNYDCVPWDYLRRGLMQHLCGKLTIPSSHDEVVDEGPYGWRGDASSVGVGVGNGYGAVN-TPQVRWMNEEELAFVRGVLKAKQEKVRLKQEKLRQQRASRGYAGTELVSIGSSGAADAASGRXXXXXXXXXXXXDVISLDAFVEFSLWWAPLMPTLSLLRNDWASTNPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPRASSMLTSAPRSRPRSQSMCVKHCLVEVRRGG-WCYIEVEQGSKVPYPSLHDLVLACSSMQVLYPD 933          
BLAST of mRNA_H-elongata_contig5937.13448.1 vs. uniprot
Match: W7U5S9_9STRA (Sh2 domain containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5S9_9STRA)

HSP 1 Score: 111 bits (278), Expect = 4.240e-22
Identity = 140/618 (22.65%), Postives = 233/618 (37.70%), Query Frame = 0
Query:    8 RLISIMGEPGLGKTARAEKVCEYVRDRRRFDKIFVVRCRGLVDEGSRDLRPTPGAGHLKHIEYLCRLIGSAIGMPAREPTSPVALHDFLVNSSVTSGDEVQPKVLLFLDDADSLFYSRGCEARDSLVDLFDKLFRRSSHIWILQTVEQHPLDRATKCVHNTGHKVRICLPLLLVRVCKTCEVKPLGNEDAARLLIHLYPRDGRGFKFEELGVPRGSSMADCPSMMVNHPVLELVGGHPGTLVSLSSHLREFSLIDDFRSHREAFRDRSSL------RFCEQRAG------------------------------------EIAV-------KHGIRSEQCKGVWVKAAKQSAEGAQGLCSYGPRWYESVQLDFLLRQLEQHLYEV----------------QTGNNINNEPSPGIIYSRLS--------VYGVTSGQERMSSTMRPRCMGPEDLNFVQS--ILRSTEKQQWEGRSSNFHHNIISIEAFRTFWEWWEETTKLISRVMYEWASTTPVKIHGFVSREEAERKLLGKKLGTFLIRFSVTNPGQISISYENRG-----------------NVEHCLVNVIQGGA----WEYNTQVYPKLQDLVKACSSLQNVY 529
            R I++ G PG+GKTA A KVC+Y+ +R +FD I++V            LR      + K  E LC++IG+AIG    E  S      FL+     SG     +V++ LD  D  F++R     +SLV +   L  R   + +L T E   L   +  + ++  KV                + PL +   A +L ++ P    GF  EE+     ++  +  + +   PV+  + GHP  +V  +  L +  L D +   ++ + D S +         E+ +G                                     +A+       +  +R    + +W++  +Q           G  WY     D L  +L + L +                  T  N   E S       +S          G T        T+R   + P D+ F++   ++R+ E             +++ I  F  F E W      I+ +  EW    P  +HGF+SR+E E  L G K GTFL RFS ++ G +S+S+  +                  ++ H LV V +        E     +  L+DL+ + +SL   Y
Sbjct:  317 RCITVRGRPGVGKTALASKVCQYLAERNQFDAIYMV-----------PLRRKEYRSYEK--ETLCKVIGAAIGF---EDASNEREIVFLLQDKHPSG-----RVIMVLDGPDR-FFNRS----NSLVQVLSYLLSRIHGLHLLVTAEGSVLGSGSGRLESSSEKV--------------VHLGPLSDVATAHMLANIAPP---GFDLEEMMSRPYATREEAYAELAASPVIRELRGHPKAIVMFAPLLEDHRLEDLYDKAKQCYVDASQVVEVDTPSMGEEESGIGXXXXXXXXXXXXXXXXXSRISSAENGRDEKRELDALALARETEEARQFLREPTSQRLWLEVVRQGGARQSSSMHQGVPWYRLT--DALQEELRKALIDALRLSRFHIEDFCATHCSTNGNGGAEGSKAFSPPAVSETKQDSKVADGATISIADKDGTIRG--LEPGDIQFIKDRLVIRTPES------------DLVRITDFAVFCEGWVPAQNSIALLCREWLCNKPRLLHGFLSRKETEALLQGYKEGTFLFRFSTSHLGLLSLSFVGKSRKNYPNDEEGEKKAKALHIRHFLVQVEEDRRCVVFMEPGRSRHASLEDLIMSSASLLEFY 875          
BLAST of mRNA_H-elongata_contig5937.13448.1 vs. uniprot
Match: A0A6H5KJ41_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ41_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 3.390e-20
Identity = 70/219 (31.96%), Postives = 104/219 (47.49%), Query Frame = 0
Query:  376 STMRPRCMGPEDLNFVQSILRSTE----------KQQWEGRS-----------------------SNFHHNIISIEAFRTFWEWWEETTKLISRVMYEWASTTPVKIHGFVSREEAERKLLGKKLGTFLIRFSVTNPGQISISYENRGN------------------------VEHCLVNVIQGGAW-----EYNTQV-YPKLQDLVKACSSLQNVYSD 531
            +T + R M  E+L FV+ +L++ +          +QQ   R                         N + N+IS+EAF  F  WW      +S +  +WAST P ++HGF+SR  AER+LL ++ GTFL+RFS + PG++ +S+                             V+HCLV V +GG W     E  ++V YP L DLV ACSS++ +Y D
Sbjct:   47 NTPQVRWMNEEELAFVRGVLKTKQEKVRLKQEKLRQQLASRGYSGTELVSIGSSGAADAAFGRDGGNGNGNVISLEAFVEFSLWWAPLMTTLSLLRNDWASTNPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPRDSSMLASAPCSRPRSQSMCVKHCLVEVRRGG-WCYIEVEQGSKVPYPSLHDLVLACSSMEVLYPD 264          
BLAST of mRNA_H-elongata_contig5937.13448.1 vs. uniprot
Match: A0A6H5KH01_9PHAE (CHAT domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH01_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 2.030e-19
Identity = 83/264 (31.44%), Postives = 122/264 (46.21%), Query Frame = 0
Query:    1 MMGNPNARLISIMGEPGLGKTARAEKVCEYVRDRRRFDKIFVVRCRGLVDEGSRDLRPTPGAGHLKHIEYLCRLIGSAIGMPAREPTSPVALHDFLVNSSVTSGDEVQPKVLLFLDDADSLFYSRGCEARDSLVDLFDKLFRRSSHIWILQTVEQHPLDRATKCVHNTGHKVRICLPLLLVRVCKTCEVKPLGNEDAARLLIHLYPRDGRGFKFEEL--GVPRGSSMADCPSMMVNHPVLELVGGHPGTLVSLSSHLREFSLID 262
            M+ +P    +++ GE G GK+ RA + C+YVR R  FD ++    +  +         T     +   +  CRLIG AIGM    P+S   L  FL +           KVLL LDD DSLF + G +ARD ++ L   L   S H+ +L T EQ  L R T      G +             +  +V+PL + DAA+LL+   P     F  +EL   +    +  D    +  H VL+   GHPGTL+ L+  L + ++ D
Sbjct:  274 MLVDPVTACVTVTGEHGSGKSERAIQACDYVRMRHHFDALWWADMKHAM--------ATAINSSVWFYDDPCRLIGIAIGMTQPGPSSEEELVRFLFDRPTVQEGRTCHKVLLVLDDVDSLFEAGG-DARDRVLKLLSNLCSMSEHLKLLVTSEQS-LQRDTNERFRHGSE-------------RVAKVRPLNDRDAAQLLLDKVPTK---FTKKELRLSLSHRCTREDILKALEAHRVLKAAEGHPGTLLRLAPLLEDHNVND 511          
BLAST of mRNA_H-elongata_contig5937.13448.1 vs. uniprot
Match: A0A6H5JPT3_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT3_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 6.720e-14
Identity = 70/250 (28.00%), Postives = 107/250 (42.80%), Query Frame = 0
Query:  275 SSLRFCEQRAGEIAVKHGIRSEQCKGVWVKAAKQSAEGAQ---GLCSYG---PRWYESVQLDFLLRQLEQHLYEVQTGNNINNEPSPGIIYSRLSVYGVTSGQERMSSTMRPRCMGPEDLNFVQSILR----STEKQQWEGRSSNF-------HHNIISIEAFRTFWEWWEETTKLISRVMYEWASTTPVKIHGFVSREEAERKLLGKKLGTFLIRFSVTNPG-------QISISYENRGNVEHCLVNVI 500
            S +   EQRA ++A   G+    C+ +WV A  + A G +   G  S G    R  E V  + L   L +HL E        N   P I+      +G              R +    L F++ ILR    +  K +W                + +S+EAF  F +WW      +  +  +WA+T PV++HGF+SR  ++R L+ ++ GTFL+RFS +  G       Q S+S      +  CLV  I
Sbjct:  124 SQMDLKEQRAWDLARAAGVVDRGCRLIWVTATSRMARGCRQDDGGGSGGGWSSRRGEIVSWECLQESLMEHLREGT--KTTRNWDDPIIL-----PHG--------------RVVDTPQLEFIRGILRRGQEAVAKARWGATGDECTEVGGDGRDDFVSVEAFANFSQWWAPLMATLGIIRNDWATTRPVRVHGFMSRVASKRLLMQRECGTFLLRFSESRMGALVISFTQPSVSVSRLSRISRCLVPFI 352          
BLAST of mRNA_H-elongata_contig5937.13448.1 vs. uniprot
Match: K8YZD6_NANGC (Sh2 domain containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YZD6_NANGC)

HSP 1 Score: 78.6 bits (192), Expect = 5.720e-12
Identity = 71/255 (27.84%), Postives = 114/255 (44.71%), Query Frame = 0
Query:    8 RLISIMGEPGLGKTARAEKVCEYVRDRRRFDKIFVVRCRGLVDEGSRDLRPTPGAGHLKHIEYLCRLIGSAIGMPAREPTSPVALHDFLVNSSVTSGDEVQPKVLLFLDDADSLFYSRGCEARDSLVDLFDKLFRRSSHIWILQTVEQHPLDRATKCVHNTGHKVRICLPLLLVRVCKTCEVKPLGNEDAARLLIHLYPRDGRGFKFEELGVPRGSSMADCPSMMVNHPVLELVGGHPGTLVSLSSHLREFSLID 262
            R I++ G PG+GKTA A KVC+Y+ +R +FD I++V            LR      + K  E LC++IG+AIG    E  S      FL+     SG     +V++ LD  D  F++R     +SLV +   L  R   + +L T E   L   +  + ++  KV                + PL +   A +L ++ P    GF  EE+     ++  +  + +   PV+  + GHP  +V  +  L +  L D
Sbjct:  175 RCITVRGRPGVGKTALASKVCQYLAERNQFDAIYMV-----------PLRRKEYRSYEK--ETLCKVIGAAIGF---EDASNEREIVFLLQDKHPSG-----RVIMVLDGPDR-FFNRS----NSLVQVLSYLLSRIHGLHLLVTAEGSVLGSGSGRLESSSEKV--------------VHLGPLSDVATAHMLANIAPP---GFDLEEMMSRPYATREEAYAELAASPVIRELRGHPKAIVMFAPLLEDHRLED 386          
BLAST of mRNA_H-elongata_contig5937.13448.1 vs. uniprot
Match: A0A7S4KIB3_9EUKA (Signal transducer and activator of transcription n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KIB3_9EUKA)

HSP 1 Score: 64.7 bits (156), Expect = 2.890e-7
Identity = 42/128 (32.81%), Postives = 66/128 (51.56%), Query Frame = 0
Query:  373 RMSSTMRPRCMGPEDLNFVQSILRSTEKQQWEGRSSNFHHNIISIEAFRTFWEWWEETTKLISRVMYEWASTTPVKIHGFVSREEAERKLLGKKLGTFLIRFSVTNPGQISISYENRGNVEHCLVNVI 500
            R   T   R +   DLNF+        K ++E +S+      I+ EA+  FW W+    + I   +   +      I G +SR++AER L G+ +GTF+IRFS TNPG+I +SY    NV   + +++
Sbjct:  489 RQDVTKPDRPLSLSDLNFL-------AKWRFENKST------ITKEAYEEFWGWFGLACRRIRHQLPFHSLWMKGLILGLISRQDAERLLTGEAVGTFVIRFSETNPGKIVLSYVKEENVGESVSHLL 603          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5937.13448.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5KC67_9PHAE4.650e-2735.42SH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FNY4_ECTSI1.460e-2536.19SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
D7FNY6_ECTSI1.540e-2334.10SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
D7FNX8_ECTSI3.470e-2229.24SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
W7U5S9_9STRA4.240e-2222.65Sh2 domain containing protein n=2 Tax=Monodopsidac... [more]
A0A6H5KJ41_9PHAE3.390e-2031.96SH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KH01_9PHAE2.030e-1931.44CHAT domain-containing protein (Fragment) n=1 Tax=... [more]
A0A6H5JPT3_9PHAE6.720e-1428.00SH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
K8YZD6_NANGC5.720e-1227.84Sh2 domain containing protein (Fragment) n=1 Tax=N... [more]
A0A7S4KIB3_9EUKA2.890e-732.81Signal transducer and activator of transcription n... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000980SH2 domainSMARTSM00252SH2_5coord: 450..528
e-value: 2.1E-8
score: 43.9
IPR000980SH2 domainPFAMPF00017SH2coord: 449..520
e-value: 4.8E-14
score: 52.2
IPR000980SH2 domainPROSITEPS50001SH2coord: 448..520
score: 12.688
NoneNo IPR availableGENE3D3.40.50.300coord: 1..158
e-value: 3.7E-7
score: 31.8
IPR036860SH2 domain superfamilyGENE3D3.30.505.10coord: 449..530
e-value: 5.9E-14
score: 53.5
IPR036860SH2 domain superfamilySUPERFAMILY55550SH2 domaincoord: 449..522
IPR007111NACHT nucleoside triphosphatasePFAMPF05729NACHTcoord: 8..159
e-value: 4.6E-7
score: 29.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..258

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5937contigH-elongata_contig5937:2333..7817 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5937.13448.1mRNA_H-elongata_contig5937.13448.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5937 2..9484 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5937.13448.1 ID=prot_H-elongata_contig5937.13448.1|Name=mRNA_H-elongata_contig5937.13448.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=536bp
MMGNPNARLISIMGEPGLGKTARAEKVCEYVRDRRRFDKIFVVRCRGLVD
EGSRDLRPTPGAGHLKHIEYLCRLIGSAIGMPAREPTSPVALHDFLVNSS
VTSGDEVQPKVLLFLDDADSLFYSRGCEARDSLVDLFDKLFRRSSHIWIL
QTVEQHPLDRATKCVHNTGHKVRICLPLLLVRVCKTCEVKPLGNEDAARL
LIHLYPRDGRGFKFEELGVPRGSSMADCPSMMVNHPVLELVGGHPGTLVS
LSSHLREFSLIDDFRSHREAFRDRSSLRFCEQRAGEIAVKHGIRSEQCKG
VWVKAAKQSAEGAQGLCSYGPRWYESVQLDFLLRQLEQHLYEVQTGNNIN
NEPSPGIIYSRLSVYGVTSGQERMSSTMRPRCMGPEDLNFVQSILRSTEK
QQWEGRSSNFHHNIISIEAFRTFWEWWEETTKLISRVMYEWASTTPVKIH
GFVSREEAERKLLGKKLGTFLIRFSVTNPGQISISYENRGNVEHCLVNVI
QGGAWEYNTQVYPKLQDLVKACSSLQNVYSDESMS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000980SH2
IPR036860SH2_dom_sf
IPR007111NACHT_NTPase
IPR027417P-loop_NTPase