prot_H-elongata_contig59345.13446.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig59345.13446.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE) HSP 1 Score: 282 bits (721), Expect = 3.110e-89 Identity = 139/286 (48.60%), Postives = 189/286 (66.08%), Query Frame = 0
Query: 16 LSVQTTFFNADVEEEVYVKMTPGYDIFDSPRV-PFVMKLKQSLYGLRQSPKNWFGTIGDHLSTIDFRSLVPNPCIYGFEDKNGNVILTLYVNDILLLGKNKQLLGKLKKQVMDGFEMTDFGDMSKVLDMNVTRGRENGTITIDQKNYTGDILERYGMKHCNVAFTPGVGPEIFFDQPVDRMLDKQKKQRYQSITGVLMYLSQVSRYNIIYTVNQLARAMPKPSKAHMGATKHVRRYLAGSANFSITYRRGGFKLTTYTGANWRGNPNNGKSTSSYIVILANGPIIF 300
+ V T F AD++EEV+V+ PG+++ D VMKL +SLYGL QSP NWF TI + I F +L +PC+Y ++ + LTLYV+D+LL G + + +K ++ F+MTD G+ S VL M + R RE T+TI Q+ Y ILER+GM TPG G EI QP D +LD+++ ++YQ I G LMY++QV RY+I+Y QLAR M KPSK HM A KH RYLAG+ +FSITY++GGFKL T++ +NW NP+NGKSTSSY+ +LAN P+ F
Sbjct: 29 MDVSTAFLYADIQEEVFVEQPPGFEVKDKEDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVIVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSF 314
BLAST of mRNA_H-elongata_contig59345.13446.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE) HSP 1 Score: 278 bits (710), Expect = 3.560e-85 Identity = 145/302 (48.01%), Postives = 193/302 (63.91%), Query Frame = 0
Query: 16 LSVQTTFFNADVEEEVYVKMTPGYDIFDSPRVPFVMKLKQSLYGLRQSPKNWFGTIGDHLSTIDFRSLVPNPCIYGFEDKNGNVILTLYVNDILLLGKN----KQLL-------------GKLKKQVMDGFEMTDFGDMSKVLDMNVTRGRENGTITIDQKNYTGDILERYGMKHCNVAFTPGVGPEIFFDQPVDRMLDKQKKQRYQSITGVLMYLSQVSRYNIIYTVNQLARAMPKPSKAHMGATKHVRRYLAGSANFSITYRRGGFKLTTYTGANWRGNPNNGKSTSSYIVILANGPIIF 300
+ V T F AD++EEV+V+ PG+++ D VMKL +SLYGL QSP NWF TI L I F +L +PC+Y ++ + LTLYV+D+LL G + K LL GKL+K+ F+MTD G+ S L M + R RE T+TI Q+ Y ILER+GM TPG G EI QP D +LD+++ ++YQ I G LMY++QV RY+I+Y QLAR+M KPSK HM A KH RYLAG+ +FSITY++GGFKL T++ +NW NP+NGKSTSSY+ +LAN P+ F
Sbjct: 238 MDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAIKHLLSSGWKLGGIARQXGKLQKR----FKMTDLGEASFALGMKIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARSMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSF 535
BLAST of mRNA_H-elongata_contig59345.13446.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE) HSP 1 Score: 286 bits (733), Expect = 2.330e-84 Identity = 139/285 (48.77%), Postives = 189/285 (66.32%), Query Frame = 0
Query: 16 LSVQTTFFNADVEEEVYVKMTPGYDIFDSPRVPFVMKLKQSLYGLRQSPKNWFGTIGDHLSTIDFRSLVPNPCIYGFEDKNGNVILTLYVNDILLLGKNKQLLGKLKKQVMDGFEMTDFGDMSKVLDMNVTRGRENGTITIDQKNYTGDILERYGMKHCNVAFTPGVGPEIFFDQPVDRMLDKQKKQRYQSITGVLMYLSQVSRYNIIYTVNQLARAMPKPSKAHMGATKHVRRYLAGSANFSITYRRGGFKLTTYTGANWRGNPNNGKSTSSYIVILANGPIIF 300
+ V T F AD++EEV+V+ PG+++ D VMKL +SLYGL QSP NWF TI L I F +L +PC+Y ++ + LTLYV+D+LL G + + +K ++ F+MTD G+ S VL M + R RE T+TI Q+ Y ILER+G+ TPG G EI QP D +LD+++ ++YQ I G LMY++QV RY+I+Y QLAR M KPSK HM A KH RYLAG+ +FSITY++GGFKL T++ +NW NP+NGKSTSSY+ +LAN P+ F
Sbjct: 1259 MDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSF 1543
BLAST of mRNA_H-elongata_contig59345.13446.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE) HSP 1 Score: 261 bits (666), Expect = 2.340e-76 Identity = 128/251 (51.00%), Postives = 169/251 (67.33%), Query Frame = 0
Query: 50 VMKLKQSLYGLRQSPKNWFGTIGDHLSTIDFRSLVPNPCIYGFEDKNGNVILTLYVNDILLLGKNKQLLGKLKKQVMDGFEMTDFGDMSKVLDMNVTRGRENGTITIDQKNYTGDILERYGMKHCNVAFTPGVGPEIFFDQPVDRMLDKQKKQRYQSITGVLMYLSQVSRYNIIYTVNQLARAMPKPSKAHMGATKHVRRYLAGSANFSITYRRGGFKLTTYTGANWRGNPNNGKSTSSYIVILANGPIIF 300
VMKL +SLYGL QSP NWF TI L I F +L +PC+Y ++ + LTLYV+D+LL G + + +K ++ F+MTD G+ S VL M + R RE T+TI Q+ Y ILER+GM TPG G EI QP D +LD+++ ++YQ I G LMY++QV RY+I+Y QLAR M KPSK HM A KH RYLAG+ +FSITY++GGFKL T++ +NW NP+NGKSTSSY+ +LAN P+ F
Sbjct: 624 VMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLRMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSF 874
BLAST of mRNA_H-elongata_contig59345.13446.1 vs. uniprot
Match: A0A6H5JW03_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW03_9PHAE) HSP 1 Score: 243 bits (619), Expect = 4.380e-75 Identity = 127/305 (41.64%), Postives = 186/305 (60.98%), Query Frame = 0
Query: 1 MMLAVAAELEDEVLMLSVQTTFFNADVEEEVYVKMTPGYDIFDSPRVP-----FVMKLKQSLYGLRQSPKNWFGTIGDHLSTIDFRSLVPNPCIYGFEDKNGNVILTLYVNDILLLGKNKQLLGKLKKQVMDGFEMTDFGDMSKVLDMNVTRGRENGTITIDQKNYTGDILERYGMKHCNVAFTPGVGPEIFFDQPVDRMLDKQKKQRYQSITGVLMYLSQVSRYNIIYTVNQLARAMPKPSKAHMGATKHVRRYLAGSANFSITYRRGGFKLTTYTGANWRGNPNNGKSTSSYIVILANGPIIF 300
M+ A+A E EV L V F NA + +VYV+ PG D R P V KL++SLYGL QSP W I D L ++ +PC+Y F ++ IL +YV+DIL+ G NK+++ KK++MD FEMTD G++ +V+ + V R E GT+ I Q Y DI +RYGM+ N TPG G E+ +QP D++L + KQR+Q+ITG L+YL+Q +RY+ Y V+QL RA P++ HM A KH+ RYL G+ + I Y++G F+L+ +T +++ NP+NG+S + Y+ L G I +
Sbjct: 1 MLFAIACEHGWEVYQLDVVAAFLNAYTDRDVYVRPAPG----DEERDPTTGEMMVYKLEKSLYGLSQSPSLWNDAINDRLIIFGWQRAHSDPCVYIFVRRDELTILAIYVDDILITGGNKEIVSSKKKELMDSFEMTDMGEVKRVIGIAVQRDYELGTLAISQGPYARDIQQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDPSYAVHQLKRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSITGYLFFLGGGLISY 301
BLAST of mRNA_H-elongata_contig59345.13446.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE) HSP 1 Score: 251 bits (642), Expect = 1.430e-74 Identity = 129/305 (42.30%), Postives = 190/305 (62.30%), Query Frame = 0
Query: 1 MMLAVAAELEDEVLMLSVQTTFFNADVEEEVYVKMTPGYDIFDSPRVP-----FVMKLKQSLYGLRQSPKNWFGTIGDHLSTIDFRSLVPNPCIYGFEDKNGNVILTLYVNDILLLGKNKQLLGKLKKQVMDGFEMTDFGDMSKVLDMNVTRGRENGTITIDQKNYTGDILERYGMKHCNVAFTPGVGPEIFFDQPVDRMLDKQKKQRYQSITGVLMYLSQVSRYNIIYTVNQLARAMPKPSKAHMGATKHVRRYLAGSANFSITYRRGGFKLTTYTGANWRGNPNNGKSTSSYIVILANGPIIF 300
M+ A+A E EV L V F NA + +VYV+ PG D R P V KL++SLYGL QSP W I D L ++ +PC+Y F + IL +YV+DIL+ G NK+++ + KK++MD FEMTD G++ +V+ + V R E+GT+ I Q Y DIL+RYGM+ N TPG G E+ +QP D++L + KQR+Q+ITG L+YL+Q +RY++ Y V+QL RA P++ HM A KH+ RYL G+ + I Y++G F+L+ +T +++ NP+NG+ST+ Y+ L G I +
Sbjct: 312 MLFAIACEHGWEVYQLDVVAAFLNAYTDRDVYVRPAPG----DEERDPTTGEMMVYKLEKSLYGLSQSPSLWNDAINDRLIIFGWQRTRSDPCVYIFVSGDELTILAIYVDDILITGGNKEIVSRKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISY 612
BLAST of mRNA_H-elongata_contig59345.13446.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE) HSP 1 Score: 254 bits (650), Expect = 3.220e-73 Identity = 127/283 (44.88%), Postives = 177/283 (62.54%), Query Frame = 0
Query: 16 LSVQTTFFNADVEEEVYVKMTPGYDIFDSPRVPFVMKLKQSLYGLRQSPKNWFGTIGDHLSTIDFRSLVPNPCIYGFEDKNGNVILTLYVNDILLLGKNKQLLGKLKKQVMDGFEMTDFGDMSKVLDMNVTRGRENGTITIDQKNYTGDILERYGMKHCNVAFTPGVGPEIFFDQPVDRMLDKQKKQRYQSITGVLMYLSQVSRYNIIYTVNQLARAMPKPSKAHMGATKHVRRYLAGSANFSITYRRGGFKLTTYTGANWRGNPNNGKSTSSYIVILANGPI 298
+ V T F AD++EEV+V+ PG+++ D VMKL +SLYGL QSP NWF TI L I F +L +PC+Y ++ + LTLYV+D+LL G + + +K ++ F+MTD G+ S VL M + R RE T+TI Q+ Y ILER+GM TPG G EI QP +LD+++ ++YQ I G MY++ +Y LAR M KPSK HM A KH R+L G+ +FSITY++GGFKL T++ +NW NP+NGKST+SY+ +L N P+
Sbjct: 1424 MDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPDYTLLDEKETRKYQGIVGSPMYIAHXDQYT------WLARPMAKPSKVHMVAAKHTLRFLVGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTASYLTMLVNAPM 1700
BLAST of mRNA_H-elongata_contig59345.13446.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE) HSP 1 Score: 251 bits (641), Expect = 4.960e-72 Identity = 129/305 (42.30%), Postives = 189/305 (61.97%), Query Frame = 0
Query: 1 MMLAVAAELEDEVLMLSVQTTFFNADVEEEVYVKMTPGYDIFDSPRVP-----FVMKLKQSLYGLRQSPKNWFGTIGDHLSTIDFRSLVPNPCIYGFEDKNGNVILTLYVNDILLLGKNKQLLGKLKKQVMDGFEMTDFGDMSKVLDMNVTRGRENGTITIDQKNYTGDILERYGMKHCNVAFTPGVGPEIFFDQPVDRMLDKQKKQRYQSITGVLMYLSQVSRYNIIYTVNQLARAMPKPSKAHMGATKHVRRYLAGSANFSITYRRGGFKLTTYTGANWRGNPNNGKSTSSYIVILANGPIIF 300
M+ A+A E EV L V F NA + +VYV+ PG D R P V KL++SLYGL QSP W I D L ++ +PC+Y F + IL +YV+DIL+ G NK+++ KK++MD FEMTD G++ +V+ + V R E+GT+ I Q Y DIL+RYGM+ N TPG G E+ +QP D++L + KQR+Q+ITG L+YL+Q +RY++ Y V+QL RA P++ HM A KH+ RYL G+ + I Y++G F+L+ +T +++ NP+NG+ST+ Y+ L G I +
Sbjct: 1091 MLFAIACEHGWEVYQLDVVAAFLNAYTDRDVYVRPAPG----DEERDPTTGEMMVYKLEKSLYGLSQSPSLWNDAINDRLIIFGWQRTRSDPCVYIFVSGDELTILAIYVDDILITGGNKEIVSSKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISY 1391
BLAST of mRNA_H-elongata_contig59345.13446.1 vs. uniprot
Match: A0A6H5KAK0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAK0_9PHAE) HSP 1 Score: 221 bits (562), Expect = 1.790e-67 Identity = 106/251 (42.23%), Postives = 165/251 (65.74%), Query Frame = 0
Query: 50 VMKLKQSLYGLRQSPKNWFGTIGDHLSTIDFRSLVPNPCIYGFEDKNGNVILTLYVNDILLLGKNKQLLGKLKKQVMDGFEMTDFGDMSKVLDMNVTRGRENGTITIDQKNYTGDILERYGMKHCNVAFTPGVGPEIFFDQPVDRMLDKQKKQRYQSITGVLMYLSQVSRYNIIYTVNQLARAMPKPSKAHMGATKHVRRYLAGSANFSITYRRGGFKLTTYTGANWRGNPNNGKSTSSYIVILANGPIIF 300
V KL +SLYGL QSP W T+ + L+ ++ +PC+Y + N VILT+YV+DIL+ G ++QL+ + KK++ D FEMTD G++ ++L ++V R E GT+ I Q++Y +LER+GM+ N TPG G EI +QP D++L K+ YQS+TG ++YL+Q +R+++ Y QL++A P++ +M A KHV RYL G+ I Y+RG F+L +T +++ NP+NG+ST+ Y+ LA G I +
Sbjct: 2 VYKLARSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKNYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISY 252
BLAST of mRNA_H-elongata_contig59345.13446.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE) HSP 1 Score: 234 bits (598), Expect = 2.020e-67 Identity = 118/286 (41.26%), Postives = 182/286 (63.64%), Query Frame = 0
Query: 16 LSVQTTFFNADVEEEVYVKMTPGYDIFDSPR-VPFVMKLKQSLYGLRQSPKNWFGTIGDHLSTIDFRSLVPNPCIYGFEDKNGNVILTLYVNDILLLGKNKQLLGKLKKQVMDGFEMTDFGDMSKVLDMNVTRGRENGTITIDQKNYTGDILERYGMKHCNVAFTPGVGPEIFFDQPVDRMLDKQKKQRYQSITGVLMYLSQVSRYNIIYTVNQLARAMPKPSKAHMGATKHVRRYLAGSANFSITYRRGGFKLTTYTGANWRGNPNNGKSTSSYIVILANGPIIF 300
L V F NA + +VYV+ PG +S P V KL++SLYGL QSP W T+ + L+ ++ +PC+Y + N VILT+YV+DIL+ G ++QL+ + KK++ D FEMTD G++ ++L ++V R E GT+ I Q++Y +LER+GM+ N TPG G EI +QP D++L K+ YQS+TG ++YL+Q +R+++ Y QL++A P++ +M A KHV RYL G+ I Y+RG F+L +T +++ NP+NG+ST+ Y+ LA G I +
Sbjct: 450 LDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISY 735 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59345.13446.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig59345.13446.1 ID=prot_H-elongata_contig59345.13446.1|Name=mRNA_H-elongata_contig59345.13446.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=301bpback to top |