prot_H-elongata_contig592.13433.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig592.13433.1
Unique Nameprot_H-elongata_contig592.13433.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length317
Homology
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BLAST of mRNA_H-elongata_contig592.13433.1 vs. uniprot
Match: D7G904_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G904_ECTSI)

HSP 1 Score: 232 bits (591), Expect = 8.660e-72
Identity = 160/297 (53.87%), Postives = 189/297 (63.64%), Query Frame = 0 
Query:   22 MRSSPSAGGMRMAGNYAQRGSPGVVRRAASRPISIIRSTSVPTQLQDRSQQQAVPSAGGSSSGSIGGDTTTSRRVLHLRDRSLQNDININGGIGINRPSATGAGRGFIGVAQSLPIPQAPMLAGSLPPSRFLDDLPPLTLGPQADVESFRRVYGAVSASQRENHLYASSCPATLGGCLDRPPGSGMK-MSVLEEGSYNEEDGDTAL--SRESKSATALSILELLSKGAVTEPEPAAKLEAVEGPPEDEKTAEDDDTEAVETSEESDGE----QEDLFKLEGLEGVNEEMNALSLSRV 311
            M SSPSAGGMR+AGNYA RGSPGVVRR ASRPISIIRSTSVP QLQDR+Q       GGS      G    +RR LH RDRSLQ+D N            +GA  G  G+ QSLP PQAP+LAGSLPPSRFLDDLPPL+LGPQAD  SF    GA+S S + N LYA+SCPA +G    RPPGS ++ MSVL EGS +EE+ + A   +  SK  TALSILE LS+       PAA ++               D E+VE+      E    ++D+F+L+GLEGVNEE+ ALSLS  
Sbjct:    1 MLSSPSAGGMRLAGNYAHRGSPGVVRRTASRPISIIRSTSVPAQLQDRTQAGDPDPEGGS------GGNPANRRGLHTRDRSLQHDFN------------SGAAGGVNGIVQSLPPPQAPLLAGSLPPSRFLDDLPPLSLGPQAD-NSFDSDCGALSTSLKANRLYATSCPANIGAHFGRPPGSRLQSMSVLAEGSLDEEEEEAAEEGAEASKRITALSILESLSQT------PAAPVDGSRV-----------DAESVESLTNIVDERLPIEDDVFELDGLEGVNEELEALSLSEA 261
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig592.13433.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G904_ECTSI8.660e-7253.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig592contigH-elongata_contig592:14528..18654 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig592.13433.1mRNA_H-elongata_contig592.13433.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig592 14475..19692 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig592.13433.1 ID=prot_H-elongata_contig592.13433.1|Name=mRNA_H-elongata_contig592.13433.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=317bp
MANTSDASGASGSDESSQISAMRSSPSAGGMRMAGNYAQRGSPGVVRRAA
SRPISIIRSTSVPTQLQDRSQQQAVPSAGGSSSGSIGGDTTTSRRVLHLR
DRSLQNDININGGIGINRPSATGAGRGFIGVAQSLPIPQAPMLAGSLPPS
RFLDDLPPLTLGPQADVESFRRVYGAVSASQRENHLYASSCPATLGGCLD
RPPGSGMKMSVLEEGSYNEEDGDTALSRESKSATALSILELLSKGAVTEP
EPAAKLEAVEGPPEDEKTAEDDDTEAVETSEESDGEQEDLFKLEGLEGVN
EEMNALSLSRVDRQQG*
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