prot_H-elongata_contig59024.13413.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig59024.13413.1
Unique Nameprot_H-elongata_contig59024.13413.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length132
Homology
BLAST of mRNA_H-elongata_contig59024.13413.1 vs. uniprot
Match: D8LMD3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD3_ECTSI)

HSP 1 Score: 201 bits (512), Expect = 3.220e-58
Identity = 104/123 (84.55%), Postives = 114/123 (92.68%), Query Frame = 0
Query:   10 EALAAFPLVPAGLFHSSLLVGIITSLGLPAAMTQAVTATIAVHPLAIVGITGVIVNALNLMPIGSLDGGRIAMSTFGRKAGGVLGTLTLLLQAVSAVFNNYSLQLFWGLLVILFQRGQDLPAK 132
            EAL  FPLVPAGLFHSSLLVGI+TS+GLP  M  AV +T+ +HPLAIVG+TG+IVNALNLMPIGSLDGGRIAMS FGRKAGGVLGT+TLLLQA+S+VFNNYSLQLFWGLLVILFQRGQDLPAK
Sbjct:  630 EALEMFPLVPAGLFHSSLLVGIMTSIGLPNVMGLAVASTVPIHPLAIVGVTGIIVNALNLMPIGSLDGGRIAMSAFGRKAGGVLGTVTLLLQAISSVFNNYSLQLFWGLLVILFQRGQDLPAK 752          
BLAST of mRNA_H-elongata_contig59024.13413.1 vs. uniprot
Match: A0A835ZIQ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIQ3_9STRA)

HSP 1 Score: 176 bits (445), Expect = 2.510e-51
Identity = 87/122 (71.31%), Postives = 105/122 (86.07%), Query Frame = 0
Query:   10 EALAAFPLVPAGLFHSSLLVGIITSLGLPAAMTQAVTATIAVHPLAIVGITGVIVNALNLMPIGSLDGGRIAMSTFGRKAGGVLGTLTLLLQAVSAVFNNYSLQLFWGLLVILFQRGQDLPA 131
            +ALAAFP+VPA LFHSS ++G ITS+ LP AM QA++  + +HPLA++G TGVIVNALNLMP+G LDGGR+A + FGR+   VLGTLTLLLQA SA+FNNYSLQLFWGL+VI+FQRGQDLPA
Sbjct:  230 DALAAFPVVPAALFHSSAIIGTITSIALPQAMLQALSTPVPLHPLAVIGFTGVIVNALNLMPVGRLDGGRLAAAGFGRRTAAVLGTLTLLLQAASAIFNNYSLQLFWGLVVIIFQRGQDLPA 351          
BLAST of mRNA_H-elongata_contig59024.13413.1 vs. uniprot
Match: A0A835ZNX7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZNX7_9STRA)

HSP 1 Score: 156 bits (395), Expect = 2.060e-44
Identity = 84/139 (60.43%), Postives = 102/139 (73.38%), Query Frame = 0
Query:   10 EALAAFPLVPAGLFHSSLLVGIITSLGLPAAMTQAVTATIAVHPLAIVGITGVIVNALNLMPIGSLDGGRIAMSTFGRKAGGVLGTLTLLLQ-----------------AVSAVFNNYSLQLFWGLLVILFQRGQDLPA 131
            +ALAAFP+VPA LFHSS  +G ITS+ LP AM QA++  + +HPLA++G+ GVIVNALNLMP+G LDG R+A + FGR+   VLGTLTLLLQ                 A SA+FNN+SLQLFWGL VI+FQRGQDLPA
Sbjct:  144 DALAAFPVVPAALFHSSATIGTITSIALPQAMLQALSTPVPLHPLAVIGLMGVIVNALNLMPVGRLDGERLAAAGFGRRTAAVLGTLTLLLQIVRHPQRTAAIITHFLDAASAIFNNHSLQLFWGLAVIIFQRGQDLPA 282          
BLAST of mRNA_H-elongata_contig59024.13413.1 vs. uniprot
Match: A0A7S2G2S1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G2S1_9STRA)

HSP 1 Score: 119 bits (299), Expect = 9.550e-32
Identity = 58/124 (46.77%), Postives = 88/124 (70.97%), Query Frame = 0
Query:    9 QEALAAFPLVPAGLFHSSLLVGIITSLGLPAAMTQAVTATIAVHPLAIVGITGVIVNALNLMPIGSLDGGRIAMSTFGRKAGGVLGTLTLLLQAVSAVFNNYSLQLFWGLLVILFQRGQDLPAK 132
            QE ++ FP++P   F SS LVG ITS+ LP+ M  + TA ++VHPL +VG+TG++VNALN MP+G +DGGR +    GR +  ++G++ LLLQA+S +  +  +QLFWG+ ++ FQR Q++P  
Sbjct:    6 QEMVSLFPVLPGSTFSSSALVGGITSVLLPSVMGLSDTAAVSVHPLTVVGLTGLLVNALNFMPVGRIDGGRASTCVLGRPSATIIGSVILLLQALSGLAGDSPIQLFWGITILCFQRSQEIPCN 129          
BLAST of mRNA_H-elongata_contig59024.13413.1 vs. uniprot
Match: A0A2V3J2Y1_9FLOR (Putative zinc metalloprotease EGY2, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2Y1_9FLOR)

HSP 1 Score: 119 bits (298), Expect = 8.080e-29
Identity = 64/128 (50.00%), Postives = 83/128 (64.84%), Query Frame = 0
Query:    5 LDGEQEALAAFPLVPAGLFHSSLLVGIITSLGLPAAMTQAVTATIAVHPLAIVGITGVIVNALNLMPIGSLDGGRIAMSTFGRKAGGVLGTLTLLLQAVSAVFNNYSLQLFWGLLVILFQRGQDLPAK 132
            + G  E    FP VP+ LFH+S+LVG +  + LP  + +   ATIAVHPL ++G TG++VNALNLMPIG LDGGRI  + +GR   G    LTL LQAVS++  N  L LFWGL+ +  QR  D P +
Sbjct:  408 ITGSGEVANWFPQVPSNLFHASVLVGAVADIILPPGLREQ--ATIAVHPLTVIGYTGLLVNALNLMPIGRLDGGRIVQALYGRAIAGRASALTLFLQAVSSLVGNSPLLLFWGLVCVFLQRESDYPCQ 533          
BLAST of mRNA_H-elongata_contig59024.13413.1 vs. uniprot
Match: R7Q4W8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4W8_CHOCR)

HSP 1 Score: 115 bits (287), Expect = 2.460e-27
Identity = 61/118 (51.69%), Postives = 79/118 (66.95%), Query Frame = 0
Query:   15 FPLVPAGLFHSSLLVGIITSLGLPAAMTQAVTATIAVHPLAIVGITGVIVNALNLMPIGSLDGGRIAMSTFGRKAGGVLGTLTLLLQAVSAVFNNYSLQLFWGLLVILFQRGQDLPAK 132
            FP VP+ LFH+S+LVG +  + LPA + +   ATIAVHPLA+VG TG++ NALNLMPIG LDGGRI  + +GR        +TLLLQ  S++  N  L LFWGL+ +  QR  D P +
Sbjct:  398 FPQVPSALFHASILVGSLADIILPAGLREQ--ATIAVHPLAVVGYTGLLANALNLMPIGRLDGGRIMQALYGRAVASRATAITLLLQGFSSLLGNSPLLLFWGLVAVFLQRESDYPCR 513          
BLAST of mRNA_H-elongata_contig59024.13413.1 vs. uniprot
Match: A0A7S1NZL4_9ALVE (Hypothetical protein n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1NZL4_9ALVE)

HSP 1 Score: 111 bits (277), Expect = 8.040e-26
Identity = 59/126 (46.83%), Postives = 82/126 (65.08%), Query Frame = 0
Query:    7 GEQEALAAFPLVPAGLFHSSLLVGIITSLGLPAAMTQAVTATIAVHPLAIVGITGVIVNALNLMPIGSLDGGRIAMSTFGRKAGGVLGTLTLLLQAVSAVFNNYSLQLFWGLLVILFQRGQDLPAK 132
            G  EA+A++P++PA LFH+S L+G+IT       + + +T  + VHPL + G  G I+NALN MPIG LDGGR A S     A  +L  +T L QA S +F+   LQLFWG+LV++FQ   ++PAK
Sbjct:  581 GTNEAIASWPVLPAALFHNSFLLGLITDFLDKGLLAEKITTPMPVHPLVVSGFLGSIINALNFMPIGRLDGGRAATSALAAGAP-LLSIVTQLAQAASGLFSGNELQLFWGILVVIFQNSPEVPAK 705          
BLAST of mRNA_H-elongata_contig59024.13413.1 vs. uniprot
Match: A0A0G4GLI0_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GLI0_VITBC)

HSP 1 Score: 111 bits (277), Expect = 8.370e-26
Identity = 59/126 (46.83%), Postives = 82/126 (65.08%), Query Frame = 0
Query:    7 GEQEALAAFPLVPAGLFHSSLLVGIITSLGLPAAMTQAVTATIAVHPLAIVGITGVIVNALNLMPIGSLDGGRIAMSTFGRKAGGVLGTLTLLLQAVSAVFNNYSLQLFWGLLVILFQRGQDLPAK 132
            G  EA+A++P++PA LFH+S L+G+IT       + + +T  + VHPL + G  G I+NALN MPIG LDGGR A S     A  +L  +T L QA S +F+   LQLFWG+LV++FQ   ++PAK
Sbjct: 1004 GTNEAIASWPVLPAALFHNSFLLGLITDFLDKGLLAEKITTPMPVHPLVVSGFLGSIINALNFMPIGRLDGGRAATSALAAGAP-LLSIVTQLAQAASGLFSGNELQLFWGILVVIFQNSPEVPAK 1128          
BLAST of mRNA_H-elongata_contig59024.13413.1 vs. uniprot
Match: M2WYG4_GALSU (Peptidase, M50 family protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WYG4_GALSU)

HSP 1 Score: 110 bits (276), Expect = 1.000e-25
Identity = 60/118 (50.85%), Postives = 77/118 (65.25%), Query Frame = 0
Query:   15 FPLVPAGLFHSSLLVGIITSLGLPAAMTQAVTATIAVHPLAIVGITGVIVNALNLMPIGSLDGGRIAMSTFGRKAGGVLGTLTLLLQAVSAVFNNYSLQLFWGLLVILFQRGQDLPAK 132
            FP VP+ LF +S+LVG +  +  P         T+AVHPL +VG TG+++NALNL+PIG LDGGRI    FGR     +G +TLLLQ + AV  N  L LFWG+ V+LFQR  DLP +
Sbjct:  475 FPQVPSLLFRASMLVGSLAKIIAP--YLDLSHNTVAVHPLTVVGYTGLLINALNLLPIGRLDGGRIVQCIFGRSTASRVGGITLLLQGLGAVLGNSPLLLFWGIFVVLFQREMDLPCE 590          
BLAST of mRNA_H-elongata_contig59024.13413.1 vs. uniprot
Match: A0A5J4Z2W4_PORPP (Putative zinc metalloprotease EGY1, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2W4_PORPP)

HSP 1 Score: 110 bits (276), Expect = 1.010e-25
Identity = 58/123 (47.15%), Postives = 77/123 (62.60%), Query Frame = 0
Query:   10 EALAAFPLVPAGLFHSSLLVGIITSLGLPAAMTQAVTATIAVHPLAIVGITGVIVNALNLMPIGSLDGGRIAMSTFGRKAGGVLGTLTLLLQAVSAVFNNYSLQLFWGLLVILFQRGQDLPAK 132
            EA A+ P +P  LFHSSLL+    S  LP  + Q   +TI+VHPL +VG TG ++NALNL+P+G LDGGRI  S  GR   G+  T+ L LQ  S++    SL L WGL+ I  QR  ++P +
Sbjct:  471 EAAASLPTIPTALFHSSLLLNTFASSLLPDGLLQQ--STISVHPLVVVGYTGALINALNLIPVGRLDGGRIVQSVLGRARAGIFSTVALALQGFSSILGGNSLLLIWGLITIFLQREPEIPCQ 591          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59024.13413.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMD3_ECTSI3.220e-5884.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZIQ3_9STRA2.510e-5171.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZNX7_9STRA2.060e-4460.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2G2S1_9STRA9.550e-3246.77Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A2V3J2Y1_9FLOR8.080e-2950.00Putative zinc metalloprotease EGY2, chloroplastic ... [more]
R7Q4W8_CHOCR2.460e-2751.69Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1NZL4_9ALVE8.040e-2646.83Hypothetical protein n=1 Tax=Vitrella brassicaform... [more]
A0A0G4GLI0_VITBC8.370e-2646.83Uncharacterized protein n=3 Tax=Vitrella brassicaf... [more]
M2WYG4_GALSU1.000e-2550.85Peptidase, M50 family protein n=1 Tax=Galdieria su... [more]
A0A5J4Z2W4_PORPP1.010e-2547.15Putative zinc metalloprotease EGY1, chloroplastic ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008915Peptidase M50PFAMPF02163Peptidase_M50coord: 35..88
e-value: 1.6E-6
score: 27.6
NoneNo IPR availablePANTHERPTHR31412FAMILY NOT NAMEDcoord: 14..132
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 73..91
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..123
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 124..132
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..72
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..48
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..37
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 101..123
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 50..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig59024contigH-elongata_contig59024:1225..3053 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig59024.13413.1mRNA_H-elongata_contig59024.13413.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig59024 1225..3053 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig59024.13413.1 ID=prot_H-elongata_contig59024.13413.1|Name=mRNA_H-elongata_contig59024.13413.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=132bp
MPDNLDGEQEALAAFPLVPAGLFHSSLLVGIITSLGLPAAMTQAVTATIA
VHPLAIVGITGVIVNALNLMPIGSLDGGRIAMSTFGRKAGGVLGTLTLLL
QAVSAVFNNYSLQLFWGLLVILFQRGQDLPAK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008915Peptidase_M50