prot_H-elongata_contig59023.13412.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig59023.13412.1
Unique Name	prot_H-elongata_contig59023.13412.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	117

Homology

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BLAST of mRNA_H-elongata_contig59023.13412.1 vs. uniprot
Match: D8LGK6_ECTSI (BTB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGK6_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 1.510e-76
Identity = 113/117 (96.58%), Postives = 115/117 (98.29%), Query Frame = 0

Query:    1 VYSWGRGEDGQLGLGDTNDQDRPVLVDALKCKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRVVEALEGQRIVQATCGSYHTAAVTDMGELYTWGGGMYGKVG 117
            VYSWGRGEDGQLGLGDTNDQDRPVLVDALK KGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPR+VEALEGQRIVQATCGSYHTAAVTD GELYTWGGGMYGK+G
Sbjct:    9 VYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLG 125

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BLAST of mRNA_H-elongata_contig59023.13412.1 vs. uniprot
Match: A0A7S1GDB4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GDB4_9STRA)

HSP 1 Score: 209 bits (532), Expect = 3.940e-66
Identity = 93/116 (80.17%), Postives = 105/116 (90.52%), Query Frame = 0

Query:    2 YSWGRGEDGQLGLGDTNDQDRPVLVDALKCKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRVVEALEGQRIVQATCGSYHTAAVTDMGELYTWGGGMYGKVG 117
            Y+WGRGEDGQLGLGDT+DQ +PV+VD LK K V+Q+ACGSGHTVVL+++G V+TWGRGDDGRLGHGDNGWKYVPRVVEAL G R+ Q TCGSYHTAAVTD G LYTWGGGMYGK+G
Sbjct:    1 YAWGRGEDGQLGLGDTSDQYKPVMVDILKDKNVMQIACGSGHTVVLTDEGQVFTWGRGDDGRLGHGDNGWKYVPRVVEALLGSRVTQVTCGSYHTAAVTDTGSLYTWGGGMYGKLG 116

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BLAST of mRNA_H-elongata_contig59023.13412.1 vs. uniprot
Match: A0A7S1D694_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D694_CYCTE)

HSP 1 Score: 206 bits (523), Expect = 7.080e-66
Identity = 92/117 (78.63%), Postives = 103/117 (88.03%), Query Frame = 0

Query:    1 VYSWGRGEDGQLGLGDTNDQDRPVLVDALKCKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRVVEALEGQRIVQATCGSYHTAAVTDMGELYTWGGGMYGKVG 117
            V+SWGRGEDGQLGLGDT+DQD P  VDAL+  GV Q+ACGSGHTVVL+ DG VYTWGRGDDGRLGHGDNGWKYVPR+ ++L GQ +VQ TCGSYHTAAVT  G+LYTWGGGMYGK+G
Sbjct:   49 VFSWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVRQIACGSGHTVVLTVDGEVYTWGRGDDGRLGHGDNGWKYVPRITQSLAGQVVVQVTCGSYHTAAVTGNGDLYTWGGGMYGKLG 165

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BLAST of mRNA_H-elongata_contig59023.13412.1 vs. uniprot
Match: T0QPW3_SAPDV (BTB domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0QPW3_SAPDV)

HSP 1 Score: 212 bits (539), Expect = 5.880e-64
Identity = 98/117 (83.76%), Postives = 107/117 (91.45%), Query Frame = 0

Query:    1 VYSWGRGEDGQLGLGDTNDQDRPVLVDALKCKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRVVEALEGQRIVQATCGSYHTAAVTDMGELYTWGGGMYGKVG 117
            VYSWGRGEDGQLGLGDT+DQ RPVLV+AL+ K VVQ+ACGSGHTVVL E+G VYTWGRGDDGRLGHGDNGWK+VPR+VEAL G+RI Q TCGSYHTAAVT  GELYTWGGGMYGK+G
Sbjct:    9 VYSWGRGEDGQLGLGDTSDQYRPVLVEALRDKCVVQIACGSGHTVVLDENGDVYTWGRGDDGRLGHGDNGWKFVPRLVEALHGKRIKQVTCGSYHTAAVTVTGELYTWGGGMYGKLG 125

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BLAST of mRNA_H-elongata_contig59023.13412.1 vs. uniprot
Match: A0A6A5A679_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A679_9STRA)

HSP 1 Score: 202 bits (513), Expect = 2.280e-63
Identity = 92/117 (78.63%), Postives = 106/117 (90.60%), Query Frame = 0

Query:    1 VYSWGRGEDGQLGLGDTNDQDRPVLVDALKCKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRVVEALEGQRIVQATCGSYHTAAVTDMGELYTWGGGMYGKVG 117
            VYSWGRGEDGQLGLGDT+DQ RPV+V+AL+ + VVQ+ACGSGHTVVL + G VYTWGRGDDGRLGHGDNGWK+VPR+VE+L+ ++I Q TCGSYHTAAVT  GELYTWGGGMYGK+G
Sbjct:    3 VYSWGRGEDGQLGLGDTSDQYRPVVVEALRERIVVQIACGSGHTVVLDDKGDVYTWGRGDDGRLGHGDNGWKFVPRLVESLQTKQIKQVTCGSYHTAAVTVSGELYTWGGGMYGKLG 119

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BLAST of mRNA_H-elongata_contig59023.13412.1 vs. uniprot
Match: A0A1V9ZGJ4_9STRA (Regulator of chromosome condensation (RCC1) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZGJ4_9STRA)

HSP 1 Score: 213 bits (542), Expect = 1.070e-62
Identity = 97/117 (82.91%), Postives = 106/117 (90.60%), Query Frame = 0

Query:    1 VYSWGRGEDGQLGLGDTNDQDRPVLVDALKCKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRVVEALEGQRIVQATCGSYHTAAVTDMGELYTWGGGMYGKVG 117
            +YSWGRGEDGQLGLGDT DQ RPVLV+AL+ K VVQ+ACGSGHTVVL EDG VYTWGRGDDGRLGHGDNGWK+VPR+VE+L G+RI Q TCGSYHTAAVT  GELYTWGGGMYGK+G
Sbjct:  244 LYSWGRGEDGQLGLGDTTDQYRPVLVEALREKNVVQIACGSGHTVVLDEDGNVYTWGRGDDGRLGHGDNGWKFVPRLVESLHGKRIKQVTCGSYHTAAVTSTGELYTWGGGMYGKLG 360

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BLAST of mRNA_H-elongata_contig59023.13412.1 vs. uniprot
Match: B7G795_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G795_PHATC)

HSP 1 Score: 202 bits (513), Expect = 2.870e-62
Identity = 89/117 (76.07%), Postives = 103/117 (88.03%), Query Frame = 0

Query:    1 VYSWGRGEDGQLGLGDTNDQDRPVLVDALKCKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRVVEALEGQRIVQATCGSYHTAAVTDMGELYTWGGGMYGKVG 117
            V++WGRGEDGQLGLGDT+DQD P  VDAL+  GV Q+ACGSGHTVVL+ DG V+TWGRGDDGRLGHGDNGWKYVPR+ ++L GQ ++Q TCGSYHTAAVT  G+LYTWGGGMYGK+G
Sbjct:    2 VFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRGDDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLG 118

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BLAST of mRNA_H-elongata_contig59023.13412.1 vs. uniprot
Match: K3WAD0_GLOUD (BTB domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAD0_GLOUD)

HSP 1 Score: 206 bits (525), Expect = 6.250e-62
Identity = 95/117 (81.20%), Postives = 105/117 (89.74%), Query Frame = 0

Query:    1 VYSWGRGEDGQLGLGDTNDQDRPVLVDALKCKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRVVEALEGQRIVQATCGSYHTAAVTDMGELYTWGGGMYGKVG 117
            VYSWGRGEDGQLGLGDT DQ RPVLVDAL+ + +VQ+ACGSGHTVVL+E+G VYTWGRGDDGRLGHGDNGWK+VPR+VE L G+ I Q TCGSYHTAAVT  GELYTWGGGMYGK+G
Sbjct:    3 VYSWGRGEDGQLGLGDTIDQYRPVLVDALQERRIVQIACGSGHTVVLTEEGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGRAIRQVTCGSYHTAAVTVSGELYTWGGGMYGKLG 119

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BLAST of mRNA_H-elongata_contig59023.13412.1 vs. uniprot
Match: A0A5D6YMT2_9STRA (BTB domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YMT2_9STRA)

HSP 1 Score: 206 bits (525), Expect = 8.730e-62
Identity = 93/117 (79.49%), Postives = 106/117 (90.60%), Query Frame = 0

Query:    1 VYSWGRGEDGQLGLGDTNDQDRPVLVDALKCKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRVVEALEGQRIVQATCGSYHTAAVTDMGELYTWGGGMYGKVG 117
            VYSWGRGEDGQLGLGDT+DQ RPVLVDAL+ + +VQ+ACGSGHTVVL+E+G V+TWGRGDDGRLGHGDNGWK+VPR+VE L G+ I Q TCGSYHTAAVT  G+LYTWGGGMYGK+G
Sbjct:   22 VYSWGRGEDGQLGLGDTSDQHRPVLVDALQERRIVQIACGSGHTVVLTEEGEVFTWGRGDDGRLGHGDNGWKFVPRLVEELRGRNIRQVTCGSYHTAAVTVAGDLYTWGGGMYGKLG 138

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BLAST of mRNA_H-elongata_contig59023.13412.1 vs. uniprot
Match: A0A024USC8_9STRA (BTB domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024USC8_9STRA)

HSP 1 Score: 203 bits (516), Expect = 9.520e-62
Identity = 92/117 (78.63%), Postives = 106/117 (90.60%), Query Frame = 0

Query:    1 VYSWGRGEDGQLGLGDTNDQDRPVLVDALKCKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRVVEALEGQRIVQATCGSYHTAAVTDMGELYTWGGGMYGKVG 117
            VYSWGRGEDGQLGLGDT+DQ RPV+V+AL+ + VVQ+ACGSGHTVVL + G VYTWGRGDDGRLGHGDNGWK+VPR+VE+L+ ++I Q TCGSYHTAAVT  GELYTWGGGMYGK+G
Sbjct:    3 VYSWGRGEDGQLGLGDTSDQYRPVVVEALRERVVVQIACGSGHTVVLDDKGDVYTWGRGDDGRLGHGDNGWKFVPRLVESLQNKQIKQVTCGSYHTAAVTVSGELYTWGGGMYGKLG 119

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig59023.13412.1 vs. uniprot

BLAST of mRNA_H-elongata_contig59023.13412.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LGK6_ECTSI	1.510e-76	96.58	BTB domain-containing protein n=2 Tax=Ectocarpus T...	[more]
A0A7S1GDB4_9STRA	3.940e-66	80.17	Hypothetical protein (Fragment) n=1 Tax=Bicosoecid...	[more]
A0A7S1D694_CYCTE	7.080e-66	78.63	Hypothetical protein (Fragment) n=1 Tax=Cyclophora...	[more]
T0QPW3_SAPDV	5.880e-64	83.76	BTB domain-containing protein n=4 Tax=Saprolegniac...	[more]
A0A6A5A679_9STRA	2.280e-63	78.63	Uncharacterized protein n=1 Tax=Aphanomyces astaci...	[more]
A0A1V9ZGJ4_9STRA	1.070e-62	82.91	Regulator of chromosome condensation (RCC1) n=1 Ta...	[more]
B7G795_PHATC	2.870e-62	76.07	Predicted protein (Fragment) n=2 Tax=Phaeodactylum...	[more]
K3WAD0_GLOUD	6.250e-62	81.20	BTB domain-containing protein n=1 Tax=Globisporang...	[more]
A0A5D6YMT2_9STRA	8.730e-62	79.49	BTB domain-containing protein n=1 Tax=Pythium bras...	[more]
A0A024USC8_9STRA	9.520e-62	78.63	BTB domain-containing protein n=2 Tax=Aphanomyces ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000408	Regulator of chromosome condensation, RCC1	PRINTS	PR00633	RCCNDNSATION	coord: 105..117 score: 38.89 coord: 1..13 score: 38.24 coord: 89..105 score: 26.47 coord: 51..67 score: 33.33
IPR000408	Regulator of chromosome condensation, RCC1	PFAM	PF00415	RCC1	coord: 50..99 e-value: 1.1E-17 score: 64.4 coord: 1..47 e-value: 1.3E-15 score: 57.7
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS00626	RCC1_2	coord: 89..99
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS00626	RCC1_2	coord: 37..47
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS50012	RCC1_3	coord: 51..102 score: 16.132
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS50012	RCC1_3	coord: 1..50 score: 19.006
IPR009091	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	GENE3D	2.130.10.30		coord: 1..117 e-value: 8.0E-45 score: 155.2
IPR009091	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	SUPERFAMILY	50985	RCC1/BLIP-II	coord: 1..116
None	No IPR available	PANTHER	PTHR22870:SF330	E3 UBIQUITIN-PROTEIN LIGASE HERC2	coord: 1..117
None	No IPR available	PANTHER	PTHR22870	REGULATOR OF CHROMOSOME CONDENSATION	coord: 1..117

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig59023	contig	H-elongata_contig59023:196..3512 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig59023.13412.1	mRNA_H-elongata_contig59023.13412.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig59023 196..3512 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig59023.13412.1 ID=prot_H-elongata_contig59023.13412.1|Name=mRNA_H-elongata_contig59023.13412.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=117bp
VYSWGRGEDGQLGLGDTNDQDRPVLVDALKCKGVVQVACGSGHTVVLSED
GAVYTWGRGDDGRLGHGDNGWKYVPRVVEALEGQRIVQATCGSYHTAAVT
DMGELYTWGGGMYGKVG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000408	Reg_chr_condens
IPR009091	RCC1/BLIP-II