prot_H-elongata_contig58955.13398.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig58955.13398.1
Unique Nameprot_H-elongata_contig58955.13398.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length142
Homology
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BLAST of mRNA_H-elongata_contig58955.13398.1 vs. uniprot
Match: D8LQW0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQW0_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 3.330e-21
Identity = 54/88 (61.36%), Postives = 63/88 (71.59%), Query Frame = 0 
Query:   55 SERVRAKRSGLAGARYFFAKWKAWAGRRAAATRMARRVERKGLRRCFLAMAANQLKLRSHLENRRLDTLRAAFSGWRVGLGRILRARL 142
            S   R+  SGLAG R  F +W+AWA RRAAA RMA R     L+RCFLA+A NQL+LR  LE+RR+  L A F GWRVGLGR+LRARL
Sbjct:  780 SALARSALSGLAGTRGRFVRWRAWARRRAAARRMALRAREAWLQRCFLALAGNQLRLRQRLEDRRMAALAAVFQGWRVGLGRLLRARL 867
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58955.13398.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQW0_ECTSI3.330e-2161.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58955contigH-elongata_contig58955:731..2156 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58955.13398.1mRNA_H-elongata_contig58955.13398.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig58955 731..2156 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig58955.13398.1 ID=prot_H-elongata_contig58955.13398.1|Name=mRNA_H-elongata_contig58955.13398.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=142bp
RSALKAWSGSAKRSAAARRMAVGRLQLSQKAYFFAWRGFAKRNARARELA
LYKCSERVRAKRSGLAGARYFFAKWKAWAGRRAAATRMARRVERKGLRRC
FLAMAANQLKLRSHLENRRLDTLRAAFSGWRVGLGRILRARL
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