prot_H-elongata_contig58940.13396.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig58940.13396.1
Unique Nameprot_H-elongata_contig58940.13396.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length108
Homology
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BLAST of mRNA_H-elongata_contig58940.13396.1 vs. uniprot
Match: A0A6H5KA14_9PHAE (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA14_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 2.060e-27
Identity = 54/92 (58.70%), Postives = 68/92 (73.91%), Query Frame = 0 
Query:   17 MYISFTIHVCDGSTLRAIDLACSPFDEAHTAVNIAHKLKGILEKRGLNPSKCVAITMDNAANMIKAGDMLNDDSNVSMTRVSCFCHTIQLVI 108
            M+ISFTIH  DG TLR IDLAC PF+  H+  NIA +LK IL   GL+P KC  ITMDNA+NMI+AG+ L+   + ++ R+SCFCH+IQL I
Sbjct:    1 MFISFTIHFVDGETLRTIDLACRPFNVTHSGENIAKELKSILTDAGLDPKKCTGITMDNASNMIRAGNQLDASDDNNILRLSCFCHSIQLSI 92
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BLAST of mRNA_H-elongata_contig58940.13396.1 vs. uniprot
Match: A0A498M545_LABRO (Zinc finger BED domain-containing 1-like protein n=2 Tax=Labeo rohita TaxID=84645 RepID=A0A498M545_LABRO)

HSP 1 Score: 73.6 bits (179), Expect = 5.430e-13
Identity = 40/109 (36.70%), Postives = 64/109 (58.72%), Query Frame = 0 
Query:    1 KFFGASTDIWTDRRGKMYISFTIH-VCDGSTLRAIDLACSPFDEAHTAVNIAHKLKGILEKRGLNPSKCVAITMDNAANMIKAGDMLNDDSNVSMTRVSCFCHTIQLVI 108
            +++  +TD+W+ R  + Y+S T+H + +   L++  L  + F E+HTA NIA  L+  +   GL+ ++ V IT DNAANM+KA D+         TR+ CF H + L I
Sbjct:  172 EYYATTTDLWSSRTTEPYMSLTVHFITEDFELKSRCLQTAFFPESHTAENIAEALREAVSAWGLDETRQVCITTDNAANMVKAADLNK------WTRLQCFGHRLHLAI 274
[Close]
BLAST of mRNA_H-elongata_contig58940.13396.1 vs. uniprot
Match: A0A6P8W1Z1_GYMAC (zinc finger BED domain-containing protein 1-like n=1 Tax=Gymnodraco acuticeps TaxID=8218 RepID=A0A6P8W1Z1_GYMAC)

HSP 1 Score: 71.6 bits (174), Expect = 5.660e-13
Identity = 42/109 (38.53%), Postives = 64/109 (58.72%), Query Frame = 0 
Query:    1 KFFGASTDIWTDRRGKMYISFTIHVCDGS-TLRAIDLACSPFDEAHTAVNIAHKLKGILEKRGLNPSKCVAITMDNAANMIKAGDMLNDDSNVSMTRVSCFCHTIQLVI 108
            +++  +TD+W+ R  + YIS T+H  D   TL++  L  + F E HT+ NIA  L+  +   GL+ ++ V IT DNAANM+KA   LN+      TR+ CF H + L +
Sbjct:   55 EYYAVTTDLWSSRTTEPYISLTVHFIDEDFTLKSRCLQTAFFPENHTSENIAAGLREAVAAWGLDETRQVCITTDNAANMVKAAS-LNE-----WTRLQCFGHRLHLAV 157
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BLAST of mRNA_H-elongata_contig58940.13396.1 vs. uniprot
Match: UPI00146A3526 (zinc finger BED domain-containing protein 1-like n=1 Tax=Pseudochaenichthys georgianus TaxID=52239 RepID=UPI00146A3526)

HSP 1 Score: 71.2 bits (173), Expect = 3.330e-12
Identity = 42/109 (38.53%), Postives = 64/109 (58.72%), Query Frame = 0 
Query:    1 KFFGASTDIWTDRRGKMYISFTIHVCDGS-TLRAIDLACSPFDEAHTAVNIAHKLKGILEKRGLNPSKCVAITMDNAANMIKAGDMLNDDSNVSMTRVSCFCHTIQLVI 108
            +++  +TD+W+ R  + YIS T+H  D   TL++  L  + F E HT+ NIA  L+  +   GL+ ++ V IT DNAANM+KA   LN+      TR+ CF H + L +
Sbjct:   41 EYYAVTTDLWSSRTTEPYISLTVHFIDEDFTLKSRCLQTAFFPENHTSDNIAAGLREAVAAWGLDETRQVCITTDNAANMVKAAS-LNE-----WTRLQCFGHRLHLAV 143
[Close]
BLAST of mRNA_H-elongata_contig58940.13396.1 vs. uniprot
Match: UPI000DF15BBF (zinc finger BED domain-containing protein 1-like n=1 Tax=Oreochromis niloticus TaxID=8128 RepID=UPI000DF15BBF)

HSP 1 Score: 67.8 bits (164), Expect = 3.570e-11
Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = 0 
Query:    3 FGASTDIWTDRRGKMYISFTIHVCDGSTLRAIDLACSPFDEAHTAVNIAHKLKGILEKRGLNPSKCVAITMDNAANMIKAGDMLNDDSNVSMTRVSCFCHTIQLVI 108
            F  +TD+W+ R  K Y++ TIH  +   L+      S F + HT  +IA  L+ +L+   LNP+  VAIT DN AN++KA  +          R+ CF H + L I
Sbjct:   57 FALTTDMWSSRTCKPYMTVTIHFMEDWELKTARFQTSYFPQDHTGEHIAEALQDVLKTWKLNPTGLVAITTDNGANIVKAVQLNK------WPRIQCFGHRLHLAI 156
[Close]
BLAST of mRNA_H-elongata_contig58940.13396.1 vs. uniprot
Match: A0A498NPM3_LABRO (Zinc finger BED domain-containing 1-like protein n=2 Tax=Labeo rohita TaxID=84645 RepID=A0A498NPM3_LABRO)

HSP 1 Score: 67.8 bits (164), Expect = 3.880e-11
Identity = 41/115 (35.65%), Postives = 64/115 (55.65%), Query Frame = 0 
Query:    1 KFFGASTDIWTDRRGKMYISFTIH-VCDGSTLRAIDLACSPFDEAHTAVNIAHKLKGILEKR------GLNPSKCVAITMDNAANMIKAGDMLNDDSNVSMTRVSCFCHTIQLVI 108
            +++  +TD+W+ R  + Y+S T+H + +   L++  L  + F E+HTA NIA  L+     R      GL+ ++ V IT DNAANM+KA D+         TR+ CF H + L I
Sbjct:  172 EYYATTTDLWSSRTTEPYMSLTVHFITEDFELKSRCLQTAFFPESHTAENIAEALREAEALREAVSAWGLDETRQVCITTDNAANMVKAADLNK------WTRLQCFGHRLHLAI 280
[Close]
BLAST of mRNA_H-elongata_contig58940.13396.1 vs. uniprot
Match: A0A673G3B6_9TELE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=A0A673G3B6_9TELE)

HSP 1 Score: 64.7 bits (156), Expect = 6.740e-10
Identity = 45/133 (33.83%), Postives = 65/133 (48.87%), Query Frame = 0 
Query:    1 KFFGASTDIWTDRRGKMYISFTIHVCDGS----TLRAIDLACSPFDEAHTAVNIAHKLKGILEKRGLNPSKCVAITMDNAANMIKA----------------GDMLNDDSNVSMT-----RVSCFCHTIQLVI 108
            KF   + DIW+DR  + Y+  T HVC+ +    TL++  L C  F   H+A NI      ILE+  +N  K   I  DNA+NM KA                 DM+ +  + + T     R+SCF H++QLV+
Sbjct:   86 KFVSVTADIWSDRTLRSYLGVTAHVCNSTANEYTLKSFLLDCRRFKGRHSADNIVAAFDEILEEYNIN-DKVEFIITDNASNMKKAFKFVMAEDHSDDSEDEEDMVGEPLDRNFTLGSRQRLSCFAHSLQLVV 217
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BLAST of mRNA_H-elongata_contig58940.13396.1 vs. uniprot
Match: A0A672S8E9_SINGR (Uncharacterized protein n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672S8E9_SINGR)

HSP 1 Score: 64.7 bits (156), Expect = 6.740e-10
Identity = 45/133 (33.83%), Postives = 64/133 (48.12%), Query Frame = 0 
Query:    1 KFFGASTDIWTDRRGKMYISFTIHVCDGS----TLRAIDLACSPFDEAHTAVNIAHKLKGILEKRGLNPSKCVAITMDNAANMIKA----------------GDMLNDDSNVSMT-----RVSCFCHTIQLVI 108
            KF   + DIW+DR  + Y+  T HVC+ +    TL++  L C  F   H A NI      ILE+  +N  K   I  DNA+NM KA                 DM+ +  + + T     R+SCF H++QLV+
Sbjct:  101 KFVSVTADIWSDRTLRSYLGVTAHVCNSTANEYTLKSFLLDCRRFKGCHNADNIVAAFDEILEEYNIN-DKVEFIITDNASNMKKAFKFVMAEDHSDDSEDEEDMVGEPLDRNFTLGSRQRLSCFAHSLQLVV 232
[Close]
BLAST of mRNA_H-elongata_contig58940.13396.1 vs. uniprot
Match: UPI000B92FB72 (zinc finger BED domain-containing protein RICESLEEPER 3-like n=1 Tax=Myzus persicae TaxID=13164 RepID=UPI000B92FB72)

HSP 1 Score: 63.2 bits (152), Expect = 1.140e-9
Identity = 38/104 (36.54%), Postives = 56/104 (53.85%), Query Frame = 0 
Query:    6 STDIWTDRRGKMYISFTIHVCDGSTL-RAIDLACSPFDEAHTAVNIAHKLKGILEKRGLNPSKCVAITMDNAANMIKAGDMLNDDSNVSMTRVSCFCHTIQLVI 108
            +TD W+      YIS T H+ +   L ++  LA    +E HTAVN+A KLK IL+   +N      IT DNA N++ A  +L  + +     V+C  H++QL I
Sbjct:   46 TTDGWSSMEQNSYISLTAHIINNEWLPKSFTLATQEMEERHTAVNLAEKLKSILDDWEINGKVSTVIT-DNAKNVVNAVKLLPLNIDNENMDVTCAAHSLQLAI 148
[Close]
BLAST of mRNA_H-elongata_contig58940.13396.1 vs. uniprot
Match: UPI000DC14DC8 (zinc finger BED domain-containing protein 1-like n=1 Tax=Melanaphis sacchari TaxID=742174 RepID=UPI000DC14DC8)

HSP 1 Score: 62.8 bits (151), Expect = 3.300e-9
Identity = 36/106 (33.96%), Postives = 59/106 (55.66%), Query Frame = 0 
Query:    6 STDIWTDRRGKMYISFTIHVCDGST---LRAIDLACSPFDEAHTAVNIAHKLKGILEKRGLNPSKCVAITMDNAANMIKAGDMLNDDSNVSMTRVSCFCHTIQLVI 108
            +TD WT R  + +++ T H  D      L ++ LAC+ F+++HTA N+A  LK  +++ GL+  +   +  DNAAN+  A +  N        R+SCF H I L++
Sbjct:  200 TTDGWTSRNNESFLAVTAHFIDPDNVTELSSVLLACTSFEDSHTADNLALFLKNTVDEWGLS-QRITVVVSDNAANIKSAIEKCN------WRRLSCFAHDINLIV 298
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58940.13396.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KA14_9PHAE2.060e-2758.70Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A498M545_LABRO5.430e-1336.70Zinc finger BED domain-containing 1-like protein n... [more]
A0A6P8W1Z1_GYMAC5.660e-1338.53zinc finger BED domain-containing protein 1-like n... [more]
UPI00146A35263.330e-1238.53zinc finger BED domain-containing protein 1-like n... [more]
UPI000DF15BBF3.570e-1135.85zinc finger BED domain-containing protein 1-like n... [more]
A0A498NPM3_LABRO3.880e-1135.65Zinc finger BED domain-containing 1-like protein n... [more]
A0A673G3B6_9TELE6.740e-1033.83Dimer_Tnp_hAT domain-containing protein n=1 Tax=Si... [more]
A0A672S8E9_SINGR6.740e-1033.83Uncharacterized protein n=1 Tax=Sinocyclocheilus g... [more]
UPI000B92FB721.140e-936.54zinc finger BED domain-containing protein RICESLEE... [more]
UPI000DC14DC83.300e-933.96zinc finger BED domain-containing protein 1-like n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007021Domain of unknown function DUF659PFAMPF04937DUF659coord: 7..107
e-value: 5.5E-11
score: 42.5
NoneNo IPR availablePANTHERPTHR46169FAMILY NOT NAMEDcoord: 1..108
NoneNo IPR availablePANTHERPTHR46169:SF1coord: 1..108
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 5..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58940contigH-elongata_contig58940:2377..2700 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58940.13396.1mRNA_H-elongata_contig58940.13396.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig58940 2377..2700 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig58940.13396.1 ID=prot_H-elongata_contig58940.13396.1|Name=mRNA_H-elongata_contig58940.13396.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=108bp
KFFGASTDIWTDRRGKMYISFTIHVCDGSTLRAIDLACSPFDEAHTAVNI
AHKLKGILEKRGLNPSKCVAITMDNAANMIKAGDMLNDDSNVSMTRVSCF
CHTIQLVI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007021DUF659
IPR012337RNaseH-like_sf