prot_H-elongata_contig5894.13395.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5894.13395.1
Unique Nameprot_H-elongata_contig5894.13395.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length186
Homology
BLAST of mRNA_H-elongata_contig5894.13395.1 vs. uniprot
Match: A0A6H5KDV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDV7_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 8.780e-37
Identity = 73/190 (38.42%), Postives = 103/190 (54.21%), Query Frame = 0
Query:    2 MPVDRECCWSHANGITKGFRACEPRDGGPMESQTELWACVQESLCNITDQNLQIATLRDPRAVTVSTYFHLAQRKSPRMANEGIESVDDFFIKYLDVITQWVSLRYFLFTEIIPERSEVFWYEDAVADPIEWHSRYYAFVGLQLPVRAIHYAAAGAIQGGNIFGFHAKGRDY-----HPGGEEKSPTRTF 186
            +PV+  C WSH +G       C   DG P+E+  +LWAC+Q++ C ITD  LQ   +RDPRAV VSTYFH   + +         S+D   ++ L V+  + +LR+ LF  ++  R+E+FWYE  V DP +WH R+ +F GL LP             GG I G  A+ + +     HPGG E S  RT+
Sbjct:   17 LPVNESCPWSHGSGTVHEGDGCWSFDGHPVETGADLWACMQKTPCEITDNRLQFVPIRDPRAVAVSTYFHRVHKDNNYQKLHP--SLDQTVLEILPVLCHFTTLRHILFGGLLSNRTELFWYEQTVEDPFDWHYRWASFAGLILP-------------GGWIDGMVAENQAHKHLNPHPGGAETSDNRTW 191          
BLAST of mRNA_H-elongata_contig5894.13395.1 vs. uniprot
Match: D8LJE4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJE4_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 7.750e-32
Identity = 64/185 (34.59%), Postives = 103/185 (55.68%), Query Frame = 0
Query:    2 MPVDRECCWSHANGITKGFRACEPRDGGPMESQTELWACVQESLCNITDQNLQIATLRDPRAVTVSTYFHLAQRKSPRMANEGIESVDDFFIKYLDVITQWVSLRYFLFTEIIPERSEVFWYEDAVADPIEWHSRYYAFVGLQLPVRAIHYAAAGAIQGGNIFGFHAKGRDYHPGGEEKSPTRTF 186
            +PV   C W H + +T   + C   +G  + + T+   C+Q+  C I D  +Q+  LRDPRAV VS++FHL     P   +   ESVD F ++ L  I  ++ LRY +  E +  ++  F Y++++ADP++WH R+ + VGL  P   +  A   +++    +GF  KG D HPGG+E +  RT+
Sbjct:  210 LPVPPSCPWQHVDNVTPENKGCTTVNGRRVGNYTDTVECLQQHPCRIVDDRIQMLILRDPRAVAVSSFFHLKTHHHPFWKHLTDESVDSFVLRMLPTICHFIHLRYLVLHEKLGGKTVEFTYDESLADPLQWHQRWLSSVGLTPPPGVVLQATNTSLR--REYGFAGKGVDKHPGGKEATEKRTW 392          
BLAST of mRNA_H-elongata_contig5894.13395.1 vs. uniprot
Match: A0A6H5JG38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG38_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 1.140e-19
Identity = 52/142 (36.62%), Postives = 81/142 (57.04%), Query Frame = 0
Query:   48 ITDQNLQIATLRDPRAVTVSTYFHLAQRKSPRMANEGI---ESVDDFFIKYLDVITQWVSLRYFLFTEIIPERSEVFWYEDAVADPIEWHSRYYAFVGLQLPVRAIHYAAAGAIQGGNIFGFHAKGRDYHPGGEEKSPTRTF 186
            + D +LQ A LRDPRAV VSTYF++  +  P   ++ +   +S+D+  +  L  + Q+ ++R+ LF   + ++SE+FWYEDA+ DP+ WH R+ +F G  LP   I    A   +           RD HPGG++ S  RT+
Sbjct:   25 LLDDSLQFAVLRDPRAVAVSTYFYV--KSHPAFYSDHVSRGKSLDEAVLLILPQLCQFTTIRHLLFDGQLSDKSEIFWYEDAMRDPLGWHYRWASFAGFALPASWIKDIDATLPEAQQKVK-----RDPHPGGQQVSSKRTW 159          
BLAST of mRNA_H-elongata_contig5894.13395.1 vs. uniprot
Match: D7G2T4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T4_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 1.840e-17
Identity = 49/132 (37.12%), Postives = 78/132 (59.09%), Query Frame = 0
Query:   58 LRDPRAVTVSTYFHLAQRKSP---RMANEGIESVDDFFIKYLDVITQWVSLRYFLFTEIIPERSEVFWYEDAVADPIEWHSRYYAFVGLQLPVRAIHYAAAGAIQGGNIFGFHAKGRDYHPGGEEKSPTRTF 186
            +RDPRAV VSTYF++  ++SP      + G +S+D+  +  L  I Q+ ++R+ LF   + +RSE+FWYEDA+ DP+ W++R+ +  G  LP R I    A   +       + + R+ HPGG+  S  RT+
Sbjct:    1 MRDPRAVAVSTYFYI--KRSPIHLHHPSRG-KSLDEAVVVILPQICQFTTIRHILFDGQLSDRSEIFWYEDAMRDPLGWYNRWASLAGFTLPARWIKDIQASLTEAAE----NDRKREPHPGGQVVSSDRTW 125          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5894.13395.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KDV7_9PHAE8.780e-3738.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJE4_ECTSI7.750e-3234.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JG38_9PHAE1.140e-1936.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2T4_ECTSI1.840e-1737.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 39..157
e-value: 4.5E-7
score: 31.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 55..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5894contigH-elongata_contig5894:7162..7719 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5894.13395.1mRNA_H-elongata_contig5894.13395.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5894 7162..10754 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5894.13395.1 ID=prot_H-elongata_contig5894.13395.1|Name=mRNA_H-elongata_contig5894.13395.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=186bp
MMPVDRECCWSHANGITKGFRACEPRDGGPMESQTELWACVQESLCNITD
QNLQIATLRDPRAVTVSTYFHLAQRKSPRMANEGIESVDDFFIKYLDVIT
QWVSLRYFLFTEIIPERSEVFWYEDAVADPIEWHSRYYAFVGLQLPVRAI
HYAAAGAIQGGNIFGFHAKGRDYHPGGEEKSPTRTF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase