prot_H-elongata_contig5878.13372.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5878.13372.1
Unique Nameprot_H-elongata_contig5878.13372.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length67
Homology
BLAST of mRNA_H-elongata_contig5878.13372.1 vs. uniprot
Match: D8LJS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS1_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 1.190e-23
Identity = 60/68 (88.24%), Postives = 63/68 (92.65%), Query Frame = 0
Query:    1 MANVK-EEKVPVTEVLEEDDEFEEFAEANWDETAEDQEDLQQWQXXXXXXXXXXDFCNQLRAELDKIK 67
            M++VK EEKVPV EVLEEDDEFEEFAEANWDETAEDQEDLQQWQ  XXXXXXXXDFCNQLRAEL+K K
Sbjct:    1 MSDVKVEEKVPVAEVLEEDDEFEEFAEANWDETAEDQEDLQQWQDDXXXXXXXXDFCNQLRAELEKTK 68          
BLAST of mRNA_H-elongata_contig5878.13372.1 vs. uniprot
Match: A0A7S2CP29_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CP29_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 2.500e-11
Identity = 34/56 (60.71%), Postives = 38/56 (67.86%), Query Frame = 0
Query:    8 KVPVTEVLEEDDEFEEFAEANWDETAEDQEDLQQWQXXXXXXXXXXDFCNQLRAEL 63
            + P  EVLEEDDEFEEFAE NWD++AED ED  QW+          DF NQLRAEL
Sbjct:   23 EAPKLEVLEEDDEFEEFAEKNWDKSAEDGEDAAQWEEDWDDGELDDDFTNQLRAEL 78          
BLAST of mRNA_H-elongata_contig5878.13372.1 vs. uniprot
Match: A0A8K1CDN8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDN8_PYTOL)

HSP 1 Score: 55.8 bits (133), Expect = 8.130e-9
Identity = 36/66 (54.55%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    5 KEEKVPVTEVL-EEDDEFEEFAEANWDETAEDQED--LQQWQXXXXXXXXXXDFCNQLRAELDKIK 67
            K +KVP   V+ EEDDEFEEF EA+WD  AED++    QQWQ          DFCNQLR EL+K K
Sbjct:    7 KNDKVPTLIVVTEEDDEFEEFEEADWDARAEDKDAHIKQQWQDDWDVDDADDDFCNQLRKELNKSK 72          
BLAST of mRNA_H-elongata_contig5878.13372.1 vs. uniprot
Match: A0A7S1ZHX0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZHX0_TRICV)

HSP 1 Score: 55.1 bits (131), Expect = 3.150e-8
Identity = 30/56 (53.57%), Postives = 32/56 (57.14%), Query Frame = 0
Query:   10 PVTEVLEEDDEFEEFAEANWDETAEDQEDLQQWQXXXXXXXXXXDFCNQLRAELDK 65
            P+TE +EEDDEFEEF    WD   ED ED QQWQ          DF   LRAEL K
Sbjct:   38 PITEAIEEDDEFEEFEPCRWDAHDEDAEDAQQWQDNWDDDDIEDDFTKNLRAELTK 93          
BLAST of mRNA_H-elongata_contig5878.13372.1 vs. uniprot
Match: A0A7S4EAY6_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EAY6_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 4.850e-8
Identity = 33/60 (55.00%), Postives = 37/60 (61.67%), Query Frame = 0
Query:    6 EEKVPVTEVLEEDDEFEEFAEANWDETAEDQEDLQQWQXXXXXXXXXXDFCNQLRAELDK 65
            E++ P  EV EEDDEFEEFA+ NWD  AED ED + WQ  X       DFC  LR EL K
Sbjct:  115 EKRKPDYEVYEEDDEFEEFAQDNWDAAAEDAEDPKLWQDDXDDDDVDDDFCRHLREELQK 174          
BLAST of mRNA_H-elongata_contig5878.13372.1 vs. uniprot
Match: A0A8J5X4N4_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X4N4_DIALT)

HSP 1 Score: 52.0 bits (123), Expect = 2.330e-7
Identity = 30/52 (57.69%), Postives = 32/52 (61.54%), Query Frame = 0
Query:   14 VLEEDDEFEEFAEANWDETAEDQEDLQQWQXXXXXXXXXXDFCNQLRAELDK 65
            +LEEDDEFEEF   +WD TAED ED Q WQ          DF  QLRAEL K
Sbjct:   12 MLEEDDEFEEFEAESWDLTAEDAEDQQLWQDDWDEDDAKNDFTQQLRAELAK 63          
BLAST of mRNA_H-elongata_contig5878.13372.1 vs. uniprot
Match: A0A484DZ62_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZ62_BRELC)

HSP 1 Score: 51.6 bits (122), Expect = 5.380e-7
Identity = 34/69 (49.28%), Postives = 43/69 (62.32%), Query Frame = 0
Query:    2 ANVKEEKVPVTEVL-EEDDEFEEFAEANWDETAEDQED--LQQWQXXXXXXXXXXDFCNQLRAELDKIK 67
            A V  EK+P+  V+ +EDDEFEEF +A+WD  AE+++    QQWQ          DFCNQLR EL K K
Sbjct:   18 APVAGEKIPMLVVVTDEDDEFEEFEDADWDGQAEEKDAHIKQQWQDDWDVDEADDDFCNQLRKELQKNK 86          
BLAST of mRNA_H-elongata_contig5878.13372.1 vs. uniprot
Match: A0A0P1AMV1_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AMV1_PLAHL)

HSP 1 Score: 51.2 bits (121), Expect = 9.950e-7
Identity = 32/65 (49.23%), Postives = 43/65 (66.15%), Query Frame = 0
Query:    4 VKEEKVPVTEVL-EEDDEFEEFAEANWDETAEDQED--LQQWQXXXXXXXXXXDFCNQLRAELDK 65
            +K++KVP+  V+ EEDDEFEEF +A+W+  AE+++    QQWQ          DFCNQLR EL K
Sbjct:   28 MKDDKVPMLVVVTEEDDEFEEFEDADWNGQAEEKDAHIKQQWQDDWDVDEADDDFCNQLRKELQK 92          
BLAST of mRNA_H-elongata_contig5878.13372.1 vs. uniprot
Match: I1CD22_RHIO9 (26S proteasome complex subunit DSS1 n=2 Tax=Rhizopus TaxID=4842 RepID=I1CD22_RHIO9)

HSP 1 Score: 50.1 bits (118), Expect = 2.070e-6
Identity = 28/52 (53.85%), Postives = 31/52 (59.62%), Query Frame = 0
Query:   14 VLEEDDEFEEFAEANWDETAEDQEDLQQWQXXXXXXXXXXDFCNQLRAELDK 65
            VLEEDDEFEEFA  +W E  EDQ D   W+          DF  QLRAEL+K
Sbjct:   24 VLEEDDEFEEFAAEDWGEEEEDQNDAHFWEDNWDDDDIEDDFSKQLRAELEK 75          
BLAST of mRNA_H-elongata_contig5878.13372.1 vs. uniprot
Match: D0N1D7_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N1D7_PHYIT)

HSP 1 Score: 49.7 bits (117), Expect = 2.940e-6
Identity = 33/64 (51.56%), Postives = 39/64 (60.94%), Query Frame = 0
Query:    7 EKVPVTEVL-EEDDEFEEFAEANWDETAEDQED--LQQWQXXXXXXXXXXDFCNQLRAELDKIK 67
            EK PV  V+ EEDDEFEEF +A+W   AE++E    QQWQ          +FCNQLR EL K K
Sbjct:   22 EKAPVLVVVTEEDDEFEEFEDADWSGQAEEKEAHIKQQWQDDWDVDEADDEFCNQLRKELQKHK 85          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5878.13372.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
D8LJS1_ECTSI1.190e-2388.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2CP29_9STRA2.500e-1160.71Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A8K1CDN8_PYTOL8.130e-954.55Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S1ZHX0_TRICV3.150e-853.57Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S4EAY6_9STRA4.850e-855.00Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]
A0A8J5X4N4_DIALT2.330e-757.69Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A484DZ62_BRELC5.380e-749.28Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A0P1AMV1_PLAHL9.950e-749.23Uncharacterized conserved protein n=1 Tax=Plasmopa... [more]
I1CD22_RHIO92.070e-653.8526S proteasome complex subunit DSS1 n=2 Tax=Rhizop... [more]
D0N1D7_PHYIT2.940e-651.56Uncharacterized protein n=2 Tax=Phytophthora infes... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 56..67
IPR007834DSS1/SEM1SMARTSM01385DSS1_SEM1_2coord: 5..65
e-value: 3.1E-19
score: 79.9
IPR007834DSS1/SEM1PFAMPF05160DSS1_SEM1coord: 9..65
e-value: 4.3E-18
score: 65.1
IPR007834DSS1/SEM1PANTHERPTHR1677126 PROTEASOME COMPLEX SUBUNIT DSS1coord: 5..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5878contigH-elongata_contig5878:3993..6725 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5878.13372.1mRNA_H-elongata_contig5878.13372.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5878 3993..6725 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5878.13372.1 ID=prot_H-elongata_contig5878.13372.1|Name=mRNA_H-elongata_contig5878.13372.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=67bp
MANVKEEKVPVTEVLEEDDEFEEFAEANWDETAEDQEDLQQWQDDWDDDD
KDDDFCNQLRAELDKIK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007834DSS1_SEM1