prot_H-elongata_contig5845.13330.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5845.13330.1
Unique Nameprot_H-elongata_contig5845.13330.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length622
Homology
BLAST of mRNA_H-elongata_contig5845.13330.1 vs. uniprot
Match: A0A6H5KL95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL95_9PHAE)

HSP 1 Score: 510 bits (1314), Expect = 3.830e-157
Identity = 345/684 (50.44%), Postives = 414/684 (60.53%), Query Frame = 0
Query:    1 MSEQLNLCLMAAEMFRAPLETSLPFPQRLCEYVSYTPVTLGGPGLEGQGLWSDDRSLSPSVVYSSLFHVQGVLTAAGKMKEAFPVLAILEHIVAKITLDPRQFVRVKLARAECLAEAGFPAEAASALAAVLTGAGVPVTTGNYAGRRYVTLCRLAKDMDITPAPIAVVAEGRGATNGKKGXXXXXXXXXXXXXXNANKNPD----LADEIKWSENPRRLAKSGLSFYGFSPYYDHLPLGHPENVAAVKWLIGEGGYPKGDDGAGGT-------------EDKAKAEDLS------RHVRLLKRGLFGADLRLLELRGEHEACLVARARARLLLGLADCSA-LPDA---RSSTDETGGNDA-VLIRVRDAADTILGEILQVAMKRISPLATMTKFKGPLDSGCLGKSGAHASSDRGSGINSINNEQKAEVPAA----TAPGEADIWVPPMAADALRLRGRLALLDGKLRVCRHHASRGLAVLLRHGFSGRSPFVAPKPQV---------------SVVNGR---------GKIGGSVGDKKAA------ARATFVDEQYQPWRTIKIWLELRHDLAVVALLQGRTANANIQIERGLKEAHAVVEPVITYRLRRLRAQALVAEGDLEQAVSDCRTLSSGRLSE-TTSALDYVAVLRLYSEASTSFLITKAGRPNREGAIKLPTQAL 621
            M  QLNLCLMAAEMFRAP+E SLP+PQR C+Y S+TP TLGGPGLE  GLW DDR LS S +  SL HVQGVL AAG  KEAFPV A+LEH+ +K+TLDP Q VRV+LARAECLAEAGFPAEAASALAAVL+G   P TT  YAGRRY      +KD    P                  XXXXXXXX      ++    D    +  E+  + +PR +AKSGL FYGF+P+ + LPLGHP+N  AV WL+GE      DD +  T              DK+  + +S      RHVRLLKRGLFG +  L EL+GE+EACLVARAR          SA LP               DA VL RVRDAAD+ILGE+LQV  KRISP A  T    PLD+G  GKS A   S      + + + ++A   AA    TAP + D W PPMAADAL +RGRLALLDGK RVCRHHASRGLAVLLRHG   +     P  +                S+ +GR         G I  ++  K A       +R    DEQ QPWR I+ WLELRHDLA VALLQGRT +A +QI RGL EAHAV E VI+ RLRRL AQA VAEG+LEQAVSDC+ L++  +++ +TSA+D  AVLRL ++      +  +G  +R  A+ L ++AL
Sbjct: 2204 MRGQLNLCLMAAEMFRAPMEISLPYPQRECDYASFTPETLGGPGLESLGLWIDDRRLSVSSLSLSLMHVQGVLVAAGCYKEAFPVQAVLEHVASKVTLDPLQLVRVQLARAECLAEAGFPAEAASALAAVLSGGSTPKTTAGYAGRRYNV--NSSKD---PPXXXXXXXXXXXXXXXXXXXXXXXXXXGGKSAADSTVEKDSGVSVGAEVSRARDPRDMAKSGLPFYGFAPFRNSLPLGHPDNAPAVSWLVGELPGIGADDTSDATGEPSRFPSDTNESADKSPDQTVSMLKSRPRHVRLLKRGLFGVNPTLEELQGENEACLVARARXXXXXXXXXXSATLPSEDXXXXXXXXXXXXDADVLKRVRDAADSILGEVLQVTFKRISPAAIPTPT-APLDTGRSGKSAATQESSLSVHPDGMESGERAATEAAHMAATAPDQPDGWAPPMAADALLMRGRLALLDGKFRVCRHHASRGLAVLLRHGLGEKGGKSFPPHRANGATASMGKLTTGASSLSSGRQYGDNDNTDGSIQHAMAMKNAGGTSGGHSRVMLDDEQRQPWRVIRTWLELRHDLAAVALLQGRTTDAMLQIRRGLDEAHAVGEGVISNRLRRLGAQAAVAEGNLEQAVSDCQALATDYINDPSTSAVDLAAVLRLMAKIRHQQSLV-SGEGDRRQALLLVSEAL 2880          
BLAST of mRNA_H-elongata_contig5845.13330.1 vs. uniprot
Match: D7FND2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FND2_ECTSI)

HSP 1 Score: 476 bits (1225), Expect = 2.830e-145
Identity = 321/664 (48.34%), Postives = 389/664 (58.58%), Query Frame = 0
Query:    1 MSEQLNLCLMAAEMFRAPLETSLPFPQRLCEYVSYTPVTLGGPGLEGQGLWSDDRSLSPSVVYSSLFHVQGVLTAAGKMKEAFPVLAILEH-----------IVAKITLDPRQFVRVKLARAECLAEAGFPAEAASALAAVLTGAGVPVTTGNYAGRRYVTLCRLAKDMDITPAPIAVVAEGRGATNGKKGXXXXXXXXXXXXXXNANKNPDLADEIKW--SENPRRLAKSGLSFYGFSPYYDHLPLGHPENVAAVKWLIGEGGYPKGDDGAGGTEDKAKAEDLSRHVRLLKRGLFGADLRLLELRGEHEACLVARARARLLLGLADCSALPDARSSTDETGGNDAVLIRVRDAADTILGEILQVAMKRISPLATMTKFKGPLDSGCLGKSGAHASSDRGSGINSINNEQKAEVPAA----TAPGEADIWVPPMAADALRLRGRLALLDGKLRVCRHHASRGLAVLLRHGFSGRS-PFVAPKPQVSVVNGRGKI---------GGSVGDKKAA---------------ARATFVDEQYQPWRTIKIWLELRHDLAVVALLQGRTANANIQIERGLKEAHAVVEPVITYRLRRLRAQALVAEGDLEQAVSDCRTLSSGRLSE-TTSALDYVAVLRLYSEASTSFLITKAGRPNREGAIKLPTQAL 621
            M  QLNLCLMAAEMFRAP+E SLP+PQR C+Y S+TP +LGGPGLE  GLW DDR LS S +  SL HVQGVL AAG  +EAFPV A+LEH           + +K+TLDP Q VRV+LAR ECLAEAGFPAEAASALAAVL+G   P TT  YAGRR       +KD    PA       G+G    K  XXXXXX           K+  ++D      + +PR +AKSGL FYGF+P+ + LPLGHP+N  AV WL+GE      DD A  T D                G+ GA                +R  +  +L   D     DAR    E  G+  VL RVRDAAD+ILGE+LQV  KRISP A  T    PLD+G  GKS A   S      + +++E++A + AA    TAP + D W PP+AADAL +RGRLALLDGK RVCRHHASRGLAVLLRHG  G+      P P        GK+         G   GD                   +R  F DEQ QPWR I+ WLELRHDLA VALLQGRT +A  QI+RGL EAHAV E VI+ RLRRL AQA VAEG+LEQAVSDC+ L++  +++ +TSA+D  AVLRL ++      +  +G  +R   + L ++AL
Sbjct: 2319 MRGQLNLCLMAAEMFRAPMEISLPYPQRECDYASFTPESLGGPGLESLGLWLDDRRLSVSSLSLSLMHVQGVLMAAGCYEEAFPVQAVLEHPSPTSFFLAFKVASKVTLDPLQLVRVQLARVECLAEAGFPAEAASALAAVLSGGSTPKTTAGYAGRR--DNANSSKDPPAAPAEAETPVAGKGKAK-KXXXXXXXXGGKSAANSTVEKDSGVSDGADGGRARDPRDMAKSGLPFYGFAPFQNSLPLGHPDNALAVSWLMGELPGIGADDTADATGDN---------------GVSGA----------------SREPSSAMLPSEDGEGRSDAR----EGEGDADVLKRVRDAADSILGEVLQVTFKRISPEAIPTPTT-PLDTGRSGKSAATQESSLSVHPDGVDSEKRAAIEAAHMAATAPDQPDGWAPPLAADALLMRGRLALLDGKFRVCRHHASRGLAVLLRHGLGGKGGKHFPPHPGNGATVLMGKLTTGASSLSSGRKYGDNDNTDGSVQHGMTMKSGGHSRVMFDDEQRQPWRVIQTWLELRHDLAAVALLQGRTMDAMFQIQRGLDEAHAVGEGVISNRLRRLGAQAAVAEGNLEQAVSDCQALAADYINDPSTSAVDLAAVLRLMAKIRQQQSLV-SGEGDRRQTLLLVSEAL 2942          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5845.13330.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KL95_9PHAE3.830e-15750.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FND2_ECTSI2.830e-14548.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33487FAMILY NOT NAMEDcoord: 3..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5845contigH-elongata_contig5845:550..4970 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5845.13330.1mRNA_H-elongata_contig5845.13330.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5845 544..9613 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5845.13330.1 ID=prot_H-elongata_contig5845.13330.1|Name=mRNA_H-elongata_contig5845.13330.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=622bp
MSEQLNLCLMAAEMFRAPLETSLPFPQRLCEYVSYTPVTLGGPGLEGQGL
WSDDRSLSPSVVYSSLFHVQGVLTAAGKMKEAFPVLAILEHIVAKITLDP
RQFVRVKLARAECLAEAGFPAEAASALAAVLTGAGVPVTTGNYAGRRYVT
LCRLAKDMDITPAPIAVVAEGRGATNGKKGDKGKAKKASEASAANANKNP
DLADEIKWSENPRRLAKSGLSFYGFSPYYDHLPLGHPENVAAVKWLIGEG
GYPKGDDGAGGTEDKAKAEDLSRHVRLLKRGLFGADLRLLELRGEHEACL
VARARARLLLGLADCSALPDARSSTDETGGNDAVLIRVRDAADTILGEIL
QVAMKRISPLATMTKFKGPLDSGCLGKSGAHASSDRGSGINSINNEQKAE
VPAATAPGEADIWVPPMAADALRLRGRLALLDGKLRVCRHHASRGLAVLL
RHGFSGRSPFVAPKPQVSVVNGRGKIGGSVGDKKAAARATFVDEQYQPWR
TIKIWLELRHDLAVVALLQGRTANANIQIERGLKEAHAVVEPVITYRLRR
LRAQALVAEGDLEQAVSDCRTLSSGRLSETTSALDYVAVLRLYSEASTSF
LITKAGRPNREGAIKLPTQAL*
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