prot_H-elongata_contig58374.13322.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig58374.13322.1
Unique Nameprot_H-elongata_contig58374.13322.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length218
Homology
BLAST of mRNA_H-elongata_contig58374.13322.1 vs. uniprot
Match: D8LKL3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKL3_ECTSI)

HSP 1 Score: 302 bits (773), Expect = 4.870e-98
Identity = 161/224 (71.88%), Postives = 177/224 (79.02%), Query Frame = 0
Query:    1 KTWGPEAFARRTRTKIHNFGAPLPPWEDKRVRPTPQARGIPKSINVILLGPTGSGKSSLIYTWWRALSGSVTGKEEFFAENVHNSFLERLRVGWNAEREEDARRRIQPSAS------ALAAGESS-APVTASAGVSSTGGVPESDGGGSVRVGEALMRAAPRHGTSGLDAFQLQAPNPHRGSAGITVHDTKGQQFFTEDEERFAEKMLEGKVKEGGAVDKQNYK 217
            +TWGPEAFARRTRTKIHN GAPLPPWE K  RPTP ARGIPKSIN+ILLGPTGSGKSSL+YTWWRALSGSVTGKEEF AE+VH+SFL+RLRVGWNA+  E+AR+R Q          ALA G SS AP TA              GGG      AL++AAPRHGT GLDAFQLQAP+PHRG  GITVHDTKGQQFFTE+EERFAE+ML+GKV+EG AVDKQNYK
Sbjct:   24 ETWGPEAFARRTRTKIHNLGAPLPPWESKEQRPTPAARGIPKSINIILLGPTGSGKSSLVYTWWRALSGSVTGKEEFLAEHVHDSFLQRLRVGWNAKEGEEARQRAQXXXXXXXXXPALATGASSVAPPTA-------------PGGG------ALLKAAPRHGTKGLDAFQLQAPDPHRGCTGITVHDTKGQQFFTEEEERFAEQMLQGKVEEGSAVDKQNYK 228          
BLAST of mRNA_H-elongata_contig58374.13322.1 vs. uniprot
Match: A0A7R9U7I7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7I7_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.300e-36
Identity = 87/219 (39.73%), Postives = 116/219 (52.97%), Query Frame = 0
Query:    1 KTWGPEAFARRTRTKIHNFGAPLPPWEDKRVRPTPQARGIPKSINVILLGPTGSGKSSLIYTWWRALSGSVTGKEE--FFAENVHNSFLERLRVGWNAEREEDARRRIQPSASALAAGESSAPVTASAGVSSTGGVPESDGGGSVRVGEALMRAAPRHGTSGLDAFQLQAPNPHRGSAGITVHDTKGQQFFTEDEERFAEKMLEGKVKEGGAVDKQNYK 217
            + WGPEAFA+R R ++ +    LPP  ++       +  +P+  NV+LLGPTG+GKSSL+YTWWRAL+G+   ++   F     H+S L RL++GW AE  EDA R  Q                                          + AAPRHGT+ L AF+LQA +   G   I +HDTKGQQFFTE+EE FA  MLEGKV  G   D  +++
Sbjct:   19 EAWGPEAFAKRLRARLKSAQVQLPPELERS-----DSSELPRGFNVLLLGPTGAGKSSLVYTWWRALAGTQAREDRASFLKNFAHHSLLRRLQLGWTAE-SEDAGRSDQ------------------------------------------LSAAPRHGTTALTAFELQAASDACGH--IQIHDTKGQQFFTEEEESFANDMLEGKVLPGSTPDAVHWR 187          
BLAST of mRNA_H-elongata_contig58374.13322.1 vs. uniprot
Match: A0A6H5K4Q7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4Q7_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 1.640e-29
Identity = 59/90 (65.56%), Postives = 66/90 (73.33%), Query Frame = 0
Query:  148 ALMRAAPRHGTSGLDAFQLQAPNPHRGSAGITVHDTKGQQFFTEDEER--------------------FAEKMLEGKVKEGGAVDKQNYK 217
            AL++AAPRHGT GLDAFQLQAP+PHRG  GITVHDTKGQQFFTE+EER                    FAE+ML+GKV+EG AVDKQNYK
Sbjct:    6 ALLKAAPRHGTKGLDAFQLQAPDPHRGCTGITVHDTKGQQFFTEEEERCGATALFGGMVGKVGMLHNGFAEQMLQGKVEEGSAVDKQNYK 95          
BLAST of mRNA_H-elongata_contig58374.13322.1 vs. uniprot
Match: A0A835Z504_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z504_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 3.160e-14
Identity = 40/73 (54.79%), Postives = 53/73 (72.60%), Query Frame = 0
Query:  145 VGEALMRAAPRHGTSGLDAFQLQAPNPHRGSAGITVHDTKGQQFFTEDEERFAEKMLEGKVKEGGAVDKQNYK 217
            V  +++ AA RHGT+ L+AF+L+   P  G AGI VHDTKGQQFFT +EERFAE +LEGK+  G   + +NY+
Sbjct:  324 VPPSVLEAAARHGTTRLEAFELRPAGPS-GVAGIAVHDTKGQQFFTHEEERFAEHLLEGKLLPGSTAESRNYR 395          
BLAST of mRNA_H-elongata_contig58374.13322.1 vs. uniprot
Match: A0A7S2STS1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STS1_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 8.980e-12
Identity = 79/232 (34.05%), Postives = 106/232 (45.69%), Query Frame = 0
Query:    1 KTWGPEAFARRTRTKIHNF----GAPLPPWEDKRVRPTPQARGIPKSINVILLGPTGSGKSSLIYTWWRAL----SGSVTGKEEFFAENVHNSFLERLRVGWNAEREEDARRRIQPSASALAAGESSAPVTASAGVSSTGGVPESDGGGSVRVGEALMRAAP-------RHGTSGLDAFQLQAPNPHRGSAGITVHDTKGQQFFTEDEERFAEKMLEGKVKEGGAVDKQNYK 217
            + WG  AFAR  R ++       G  LP     R+   P+        N+++LGP GSGKSSLIYT WRAL    SG+ T  E    ++   S       G  ++  ED+   +  SA   A G SS         S    +P  D    + V  +L   AP       RHGT GL    +  P+     AGI+VHDTKGQQFF + E R A  +L G   EG   +++N +
Sbjct:   51 EVWGAPAFARAIRGRLVARQLCDGEGLPQGTSTRLPSPPR-------WNLLVLGPAGSGKSSLIYTLWRALHHHESGTRTQSEALGGQDPEAS------TGGESQSPEDSSPCLG-SAHQPADGPSS---------SVADDLPAED---KMAVELSLGWEAPTGTSLRARHGTKGLRVVDILEPDGCH--AGISVHDTKGQQFFDDAEGRHAGHLLHGTALEGSNQEQENLR 254          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58374.13322.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LKL3_ECTSI4.870e-9871.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9U7I7_9STRA1.300e-3639.73Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6H5K4Q7_9PHAE1.640e-2965.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z504_9STRA3.160e-1454.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2STS1_9STRA8.980e-1234.05Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 39..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58374contigH-elongata_contig58374:491..3533 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58374.13322.1mRNA_H-elongata_contig58374.13322.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig58374 491..3533 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig58374.13322.1 ID=prot_H-elongata_contig58374.13322.1|Name=mRNA_H-elongata_contig58374.13322.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=218bp
KTWGPEAFARRTRTKIHNFGAPLPPWEDKRVRPTPQARGIPKSINVILLG
PTGSGKSSLIYTWWRALSGSVTGKEEFFAENVHNSFLERLRVGWNAEREE
DARRRIQPSASALAAGESSAPVTASAGVSSTGGVPESDGGGSVRVGEALM
RAAPRHGTSGLDAFQLQAPNPHRGSAGITVHDTKGQQFFTEDEERFAEKM
LEGKVKEGGAVDKQNYK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase