prot_H-elongata_contig58341.13317.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig58341.13317.1
Unique Nameprot_H-elongata_contig58341.13317.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length103
Homology
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BLAST of mRNA_H-elongata_contig58341.13317.1 vs. uniprot
Match: D7G427_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G427_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 3.670e-25
Identity = 56/85 (65.88%), Postives = 62/85 (72.94%), Query Frame = 0 
Query:   24 SLRPGMLDEGCESALRKAGKLRGCVDEAYGALRDLHCEVG-------------VKAFGEEKLNFDPSLQQTNGLDARIAGTASAP 95
            SLRP MLDEGCE+ LR+AGKLRGCVDEAYGALRDL CEVG             V AFGEEK NF+PSLQ+T  L  RI G+A+AP
Sbjct:  479 SLRPTMLDEGCEAVLREAGKLRGCVDEAYGALRDLQCEVGLVTMGESGKVQIGVTAFGEEKPNFNPSLQETKDLGERIEGSATAP 563
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BLAST of mRNA_H-elongata_contig58341.13317.1 vs. uniprot
Match: A0A7S3MBM2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MBM2_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 1.860e-16
Identity = 46/101 (45.54%), Postives = 56/101 (55.45%), Query Frame = 0 
Query:   10 QACLCIRNIAARGPSLRPGMLDEGCESALRKAGKLRGCVDEAYGALRDLHCEVGVKAFGEE--------------KLNFDPSLQQTNGLDARIAGTASAPL 96
            Q CL +RNIAARGP LRP +LD G E  LR AG++   VDEAYGALRDL CEV     G +              KL F+P   + + +  R+   A APL
Sbjct:  407 QGCLTVRNIAARGPELRPVLLDAGFEDLLRAAGRIMDVVDEAYGALRDLGCEVHYVKVGADGRVEPVYEQFGAAAKLQFNPIYDEDDYITTRVQEEARAPL 507
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58341.13317.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G427_ECTSI3.670e-2565.88Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3MBM2_9STRA1.860e-1645.54Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58341contigH-elongata_contig58341:2228..3338 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58341.13317.1mRNA_H-elongata_contig58341.13317.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig58341 2228..3338 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig58341.13317.1 ID=prot_H-elongata_contig58341.13317.1|Name=mRNA_H-elongata_contig58341.13317.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=103bp
SYPATPRKFQACLCIRNIAARGPSLRPGMLDEGCESALRKAGKLRGCVDE
AYGALRDLHCEVGVKAFGEEKLNFDPSLQQTNGLDARIAGTASAPLGHVG
TL*
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