prot_H-elongata_contig58310.13312.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig58310.13312.1
Unique Nameprot_H-elongata_contig58310.13312.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length99
Homology
BLAST of mRNA_H-elongata_contig58310.13312.1 vs. uniprot
Match: A0A6H5K5T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5T2_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 1.460e-37
Identity = 72/92 (78.26%), Postives = 80/92 (86.96%), Query Frame = 0
Query:    7 LFFLEIPSPSSRRTQVDSNLNPLPVSVRVGQAVETVGQAGKPKTITGFQTHTTPVLLGVRDRAELATNEWVPSTSVLEGVVILTRNPELNDP 98
            LF++           VDS+L PLPV+VRVGQAVETVGQAGKPKTITGFQTHTTPVLLGVRDRAELATNEW+PS++VLEGVVILTRNPEL+DP
Sbjct:  884 LFYITAAMNPRMLMTVDSDLKPLPVNVRVGQAVETVGQAGKPKTITGFQTHTTPVLLGVRDRAELATNEWIPSSNVLEGVVILTRNPELDDP 975          
BLAST of mRNA_H-elongata_contig58310.13312.1 vs. uniprot
Match: A0A6A5ADN9_9STRA (RPN1_C domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ADN9_9STRA)

HSP 1 Score: 110 bits (275), Expect = 1.740e-29
Identity = 57/92 (61.96%), Postives = 69/92 (75.00%), Query Frame = 0
Query:    2 NINRFLFFLEIPSPSSRRTQVDSNLNPLPVSVRVGQAVETVGQAGKPKTITGFQTHTTPVLLGVRDRAELATNEWVPSTSVLEGVVILTRNP 93
            N + FL+ +           VD   NPLPVSVRVGQAVE VGQAG+PK+ITGFQTH TPVLL V+DRAELAT+E++  T+VLEG+VIL +NP
Sbjct:    8 NSHYFLYCIVTAMQPRMLITVDEQGNPLPVSVRVGQAVEVVGQAGRPKSITGFQTHNTPVLLNVKDRAELATDEYIALTNVLEGIVILRKNP 99          
BLAST of mRNA_H-elongata_contig58310.13312.1 vs. uniprot
Match: A0A0H5R5N8_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R5N8_9EUKA)

HSP 1 Score: 119 bits (298), Expect = 3.370e-29
Identity = 61/89 (68.54%), Postives = 74/89 (83.15%), Query Frame = 0
Query:    6 FLFFLEIPSPSSRR-TQVDSNLNPLPVSVRVGQAVETVGQAGKPKTITGFQTHTTPVLLGVRDRAELATNEWVPSTSVLEGVVILTRNP 93
            +L F  +P+  +R  T +D NLNPLPVSVRVGQAV+TVGQAG PKTIT FQTHTTPVLLG  +RAELAT+E++P +SVLEG+VIL +NP
Sbjct:  830 YLLFSLVPAIRARMLTTLDENLNPLPVSVRVGQAVDTVGQAGSPKTITSFQTHTTPVLLGYNERAELATDEYIPVSSVLEGLVILKKNP 918          
BLAST of mRNA_H-elongata_contig58310.13312.1 vs. uniprot
Match: A0A7S0G4F9_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G4F9_9RHOD)

HSP 1 Score: 112 bits (281), Expect = 3.970e-29
Identity = 57/88 (64.77%), Postives = 69/88 (78.41%), Query Frame = 0
Query:    7 LFFLEIPSPSSRRTQVDSNLNPLPVSVRVGQAVETVGQAGKPKTITGFQTHTTPVLLGVRDRAELATNEWVPSTSVLEGVVILTRNPE 94
            L+FL + S       VD +LNPLPV++RVGQAV+TVGQAG PKTITGFQTHT+PVLL   +RAELAT E++P  SVLEG VIL +NP+
Sbjct:  120 LYFLSLSSRPRMVFTVDEDLNPLPVNIRVGQAVDTVGQAGHPKTITGFQTHTSPVLLAAGERAELATEEYLPVASVLEGCVILKKNPD 207          
BLAST of mRNA_H-elongata_contig58310.13312.1 vs. uniprot
Match: A0A7S1TBG1_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TBG1_9RHOD)

HSP 1 Score: 109 bits (273), Expect = 1.420e-28
Identity = 56/92 (60.87%), Postives = 70/92 (76.09%), Query Frame = 0
Query:    7 LFFLEIPSPSSRRTQVDSNLNPLPVSVRVGQAVETVGQAGKPKTITGFQTHTTPVLLGVRDRAELATNEWVPSTSVLEGVVILTRNPELNDP 98
            LF+L +         VD NL PL V+VRVG AV+TVGQAG+PKTITGFQTHT+PVLLG ++RAELAT+E++P ++V EGVVIL +NP    P
Sbjct:   59 LFYLALAVKPRMVYCVDENLEPLAVTVRVGTAVDTVGQAGRPKTITGFQTHTSPVLLGAKERAELATDEYIPLSAVFEGVVILRKNPSYVPP 150          
BLAST of mRNA_H-elongata_contig58310.13312.1 vs. uniprot
Match: F4Q5A0_CAVFA (26S proteasome regulatory subunit S2 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q5A0_CAVFA)

HSP 1 Score: 117 bits (293), Expect = 1.610e-28
Identity = 57/72 (79.17%), Postives = 66/72 (91.67%), Query Frame = 0
Query:   22 VDSNLNPLPVSVRVGQAVETVGQAGKPKTITGFQTHTTPVLLGVRDRAELATNEWVPSTSVLEGVVILTRNP 93
            +D NLNPLPVSVRVGQ+V+TVGQAGKPKTITGFQTHTTPVLLG  DRAELAT++++P +SVLEG+VIL  NP
Sbjct:  793 LDENLNPLPVSVRVGQSVDTVGQAGKPKTITGFQTHTTPVLLGYNDRAELATDDYIPLSSVLEGIVILKPNP 864          
BLAST of mRNA_H-elongata_contig58310.13312.1 vs. uniprot
Match: A0A0G4IJI4_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IJI4_PLABS)

HSP 1 Score: 116 bits (291), Expect = 2.960e-28
Identity = 58/73 (79.45%), Postives = 64/73 (87.67%), Query Frame = 0
Query:   22 VDSNLNPLPVSVRVGQAVETVGQAGKPKTITGFQTHTTPVLLGVRDRAELATNEWVPSTSVLEGVVILTRNPE 94
            +D  L PLPVSVRVGQAV+TVGQAG PKTITGFQTHTTPVLLG  DRAELAT+E++P TSVLEG VIL +NPE
Sbjct:  823 LDEELKPLPVSVRVGQAVDTVGQAGSPKTITGFQTHTTPVLLGYNDRAELATDEYIPVTSVLEGFVILKKNPE 895          
BLAST of mRNA_H-elongata_contig58310.13312.1 vs. uniprot
Match: A0A0P1AZB9_PLAHL (26s proteasome non-atpase regulatory subunit 2 n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1AZB9_PLAHL)

HSP 1 Score: 116 bits (290), Expect = 4.040e-28
Identity = 58/72 (80.56%), Postives = 65/72 (90.28%), Query Frame = 0
Query:   22 VDSNLNPLPVSVRVGQAVETVGQAGKPKTITGFQTHTTPVLLGVRDRAELATNEWVPSTSVLEGVVILTRNP 93
            +D  LNPLPVSVRVGQAVE VGQAG+PK+ITGFQTHTTPVLL VRDRAELAT E++P T+VLEGVVIL +NP
Sbjct:  820 LDEELNPLPVSVRVGQAVEIVGQAGRPKSITGFQTHTTPVLLNVRDRAELATEEYLPLTNVLEGVVILRKNP 891          
BLAST of mRNA_H-elongata_contig58310.13312.1 vs. uniprot
Match: M4B1J0_HYAAE (Uncharacterized protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=M4B1J0_HYAAE)

HSP 1 Score: 116 bits (290), Expect = 4.040e-28
Identity = 57/73 (78.08%), Postives = 67/73 (91.78%), Query Frame = 0
Query:   22 VDSNLNPLPVSVRVGQAVETVGQAGKPKTITGFQTHTTPVLLGVRDRAELATNEWVPSTSVLEGVVILTRNPE 94
            +D  LNPLPVSVRVGQAVE VGQAG+PK+ITGFQTHTTPVLL V+DRAELAT+E++P T+VLEGVVIL +NP+
Sbjct:  822 LDEELNPLPVSVRVGQAVEIVGQAGRPKSITGFQTHTTPVLLNVKDRAELATDEYLPLTNVLEGVVILRKNPD 894          
BLAST of mRNA_H-elongata_contig58310.13312.1 vs. uniprot
Match: K3W6K9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6K9_GLOUD)

HSP 1 Score: 115 bits (289), Expect = 5.510e-28
Identity = 57/73 (78.08%), Postives = 66/73 (90.41%), Query Frame = 0
Query:   22 VDSNLNPLPVSVRVGQAVETVGQAGKPKTITGFQTHTTPVLLGVRDRAELATNEWVPSTSVLEGVVILTRNPE 94
            +D  LNPLPVSVRVGQAVE VGQAG+PK+ITGFQTHTTPVLL V+DRAELAT E++P T+VLEGVVIL +NP+
Sbjct:  823 LDEELNPLPVSVRVGQAVEIVGQAGRPKSITGFQTHTTPVLLNVKDRAELATEEYLPLTNVLEGVVILRKNPD 895          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58310.13312.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5T2_9PHAE1.460e-3778.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A5ADN9_9STRA1.740e-2961.96RPN1_C domain-containing protein n=2 Tax=Aphanomyc... [more]
A0A0H5R5N8_9EUKA3.370e-2968.54Uncharacterized protein (Fragment) n=1 Tax=Spongos... [more]
A0A7S0G4F9_9RHOD3.970e-2964.77Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S1TBG1_9RHOD1.420e-2860.87Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
F4Q5A0_CAVFA1.610e-2879.1726S proteasome regulatory subunit S2 n=1 Tax=Caven... [more]
A0A0G4IJI4_PLABS2.960e-2879.45Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A0P1AZB9_PLAHL4.040e-2880.5626s proteasome non-atpase regulatory subunit 2 n=2... [more]
M4B1J0_HYAAE4.040e-2878.08Uncharacterized protein n=22 Tax=Peronosporaceae T... [more]
K3W6K9_GLOUD5.510e-2878.08Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR04143326S proteasome non-ATPase regulatory subunit RPN1, C-terminalPFAMPF18051RPN1_Ccoord: 42..94
e-value: 4.4E-30
score: 103.5
NoneNo IPR availablePANTHERPTHR1094326S PROTEASOME NON-ATPASE REGULATORY SUBUNITcoord: 22..95
IPR01664326S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunitPANTHERPTHR10943:SF1126S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 2coord: 22..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58310contigH-elongata_contig58310:2936..3594 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58310.13312.1mRNA_H-elongata_contig58310.13312.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig58310 2936..3621 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig58310.13312.1 ID=prot_H-elongata_contig58310.13312.1|Name=mRNA_H-elongata_contig58310.13312.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=99bp
MNINRFLFFLEIPSPSSRRTQVDSNLNPLPVSVRVGQAVETVGQAGKPKT
ITGFQTHTTPVLLGVRDRAELATNEWVPSTSVLEGVVILTRNPELNDPT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041433RPN1_C
IPR01664326S_Psome_Rpn1