prot_H-elongata_contig58093.13284.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig58093.13284.1
Unique Nameprot_H-elongata_contig58093.13284.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length168
Homology
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BLAST of mRNA_H-elongata_contig58093.13284.1 vs. uniprot
Match: A0A6H5KKV1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKV1_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 2.030e-7
Identity = 37/72 (51.39%), Postives = 43/72 (59.72%), Query Frame = 0 
Query:   84 SLMSVQARLFFAPPHRLIHATALALSPRRSTGSPSSRGWSRSTICTSQAVMHIPASSKRLMQIFRALVFSDC 155
            SL    ARL   PPH L+  TA  LSPR +T  PSS G S   ICT+ AVM++PASS RL  I R+ V   C
Sbjct:    2 SLTMRLARLSRDPPHLLVQLTADTLSPRINTDCPSSIGLSFKIICTTHAVMNMPASSNRL--IVRSAVSFSC 71
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58093.13284.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KKV1_9PHAE2.030e-751.39Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58093contigH-elongata_contig58093:407..910 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58093.13284.1mRNA_H-elongata_contig58093.13284.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig58093 29..1071 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig58093.13284.1 ID=prot_H-elongata_contig58093.13284.1|Name=mRNA_H-elongata_contig58093.13284.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=168bp
MRLQRVSSNISSGQFSRNRCSNMFLPDGPMSCWRQPSSLVSRVTFSWTRS
AGHREMPSASTFSAPGICFATWHHLLRISRRPNSLMSVQARLFFAPPHRL
IHATALALSPRRSTGSPSSRGWSRSTICTSQAVMHIPASSKRLMQIFRAL
VFSDCVFREAARLGSRA*
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