prot_H-elongata_contig57866.13261.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig57866.13261.1
Unique Nameprot_H-elongata_contig57866.13261.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length271
Homology
BLAST of mRNA_H-elongata_contig57866.13261.1 vs. uniprot
Match: A0A6H5JPC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPC8_9PHAE)

HSP 1 Score: 240 bits (613), Expect = 2.320e-75
Identity = 119/162 (73.46%), Postives = 143/162 (88.27%), Query Frame = 0
Query:   98 ISAQNVARQVYRESGLRGFYRGIGVSILQFAPTSAIWWAAYGLYSKAFIQALENFYPSQLPALTAERRKIGAQAAAGLCTGMTTVILTNPLDVLRTRLQVQGRHGDNRTLRSEYRALIAESGPGGLLRGLVPRMLAMAPASVLIVTVYELIKRLSRKAPTTP 259
            ++A+ VARQVY ESGLRGFYRG G+S+LQFAPTSAIWWAAYG+YS+AF++AL N  P  +P LTA++R++G QAAAG CTGMTTV+LTNPLDVLRTRLQV+GR GD+RT+ SEYR L+AESGP GL++GL PR+LA+APASVLIV+VYELIKRLSRK P  P
Sbjct:  107 VTAREVARQVYGESGLRGFYRGFGISVLQFAPTSAIWWAAYGVYSRAFVRALGNL-PEPVPKLTAQQRQVGGQAAAGFCTGMTTVLLTNPLDVLRTRLQVEGRRGDDRTIVSEYRILMAESGPRGLMKGLGPRILAVAPASVLIVSVYELIKRLSRKTPLAP 267          
BLAST of mRNA_H-elongata_contig57866.13261.1 vs. uniprot
Match: D8LS61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS61_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 1.460e-72
Identity = 116/158 (73.42%), Postives = 138/158 (87.34%), Query Frame = 0
Query:  102 NVARQVYRESGLRGFYRGIGVSILQFAPTSAIWWAAYGLYSKAFIQALENFYPSQLPALTAERRKIGAQAAAGLCTGMTTVILTNPLDVLRTRLQVQGRHGDNRTLRSEYRALIAESGPGGLLRGLVPRMLAMAPASVLIVTVYELIKRLSRKAPTTP 259
            ++  QVY ESGLRGFYRG G+S+LQFAPTSAIWWAAYG+YS+AF++AL N  P  +P LTA++R++G QAAAG CTGMTTV+LTNPLDVLRTRLQV+GR GD+RT+ SEYR L+AESGP GL++GL PR+LAMAPASVLIV+VYELIKRLSRK P  P
Sbjct:  140 DIIGQVYGESGLRGFYRGFGISVLQFAPTSAIWWAAYGVYSRAFVRALGNL-PEPVPELTAQQRQVGGQAAAGFCTGMTTVLLTNPLDVLRTRLQVEGRRGDDRTIASEYRILMAESGPRGLMKGLGPRILAMAPASVLIVSVYELIKRLSRKTPLPP 296          
BLAST of mRNA_H-elongata_contig57866.13261.1 vs. uniprot
Match: A0A835YRA5_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRA5_9STRA)

HSP 1 Score: 156 bits (395), Expect = 6.550e-42
Identity = 108/270 (40.00%), Postives = 136/270 (50.37%), Query Frame = 0
Query:    1 MTAGAASSTVTQFFTVPIDVISQKMMVNGPRGGQVVPTAAAARGEARPAGEMAVATASDQQGTLRRTVAGAGGGSGGTSCEGIQARQGEERGEGRRHISAQNVARQVYRESGLRGFYRGIGVSILQFAPTSAIWWAAYGLYS---------------KAFIQALENFYPSQLPALTAERRKIGAQAAAGLCTGMTTVILTNPLDVLRTRLQVQ-GRHGDNRTLRSEYRALIAESGPGGLLRGLVPRMLAMAPASVLIVTVYELIKRLSRK 254
            M AGA +S   Q  TVPIDV+SQ++MV G  GG+  PT AAA                                                            +AR+VY   G+RGFYRG   +++QFAPTSA WW+AYGLY                K  + A  +  P  L   + E R+I  QA AG   G TTV+LTNPLDV+RTRLQV+ G      T+ SE RAL A +G   L++GL PRM+++APASVL+VT YE IKR+SRK
Sbjct:  136 MVAGAGASVAMQVATVPIDVVSQRLMVAGIAGGEGGPTTAAA------------------------------------------------------------IAREVYATGGVRGFYRGFAAAVMQFAPTSAAWWSAYGLYKXXXXXXXXXXXXXXXKEPLAARIDALPLNL---SEEARQILVQATAGYLAGATTVVLTNPLDVIRTRLQVRRGAAAAGATMLSEARALWAAAGARALMKGLGPRMISVAPASVLVVTTYEYIKRVSRK 342          
BLAST of mRNA_H-elongata_contig57866.13261.1 vs. uniprot
Match: A0A7S2V638_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V638_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.580e-34
Identity = 89/254 (35.04%), Postives = 123/254 (48.43%), Query Frame = 0
Query:    3 AGAASSTVTQFFTVPIDVISQKMMVNGPRGGQVVPTAAAARGEARPAGEMAVATASDQQGTLRRTVAGAGGGSGGTSCEGIQARQGEERGEGRRHISAQNVARQVYRESGLRGFYRGIGVSILQFAPTSAIWWAAYGLYSKAFIQALENFYPSQLPALTAERRKIGAQAAAGLCTGMTTVILTNPLDVLRTRLQVQGRHGD--NRTLRSEYRALIAESGPGGLLRGLVPRMLAMAPASVLIVTVYELIKRLSRK 254
            +GA  S   Q FT+P+DV+SQ+MMV G     + P A+                                                              +ARQ+Y + G+RGFY+G+G S++QFAPTSAIWW  Y        +     + ++  A         +QA AG   G   V+LTNPLDV+RTRLQV G      NRT  +E++ L+A  G   L +GLVPR++A+APASV+I++VYE IKR+S K
Sbjct:  154 SGAGCSAAFQVFTIPVDVVSQRMMVAGKGDANMRPKASV-------------------------------------------------------------LARQIYEKHGIRGFYKGVGASLMQFAPTSAIWWTTYHAVELHVERVSRPLFSNKDNAARV------SQAIAGFTGGTVAVLLTNPLDVIRTRLQVLGTENSTANRTFVTEFQHLLATEGAKSLTKGLVPRLIAVAPASVIIISVYEFIKRVSVK 340          
BLAST of mRNA_H-elongata_contig57866.13261.1 vs. uniprot
Match: A0A5J4Y3N1_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y3N1_9CHLO)

HSP 1 Score: 132 bits (332), Expect = 9.760e-33
Identity = 95/260 (36.54%), Postives = 133/260 (51.15%), Query Frame = 0
Query:    3 AGAASSTVTQFFTVPIDVISQKMMVNGPRGGQVVPTA---AAARGEARPAGEMAVATASDQQGTLRRTVAGAGGGSGGTSCEGIQARQGEERGEGRRHISAQNVARQVYRESGLRGFYRGIGVSILQFAPTSAIWWAAYGLYSKAFIQALENFYPSQLPALTAERRK---IGAQAAAGLCTGMTTVILTNPLDVLRTRLQVQGRHGDNR--TLRSEYRALIAESGPGGLLRGLVPRMLAMAPASVLIVTVYELIKRLSRK 254
            AGA +S VTQ   VP+DV+SQ++MVN  R  Q  PT    A++   +    + A  T    +     T A A GG  G +                       +AR + ++ G+RG YRG G S+  F P+SAIWW+AYG Y KA     E     +       R     +  Q ++ + +G+T+ +LTNPLDV++TRLQV  R  D +  T R   + LIAE GP GLLRG+ PR+ + A  S  +VT YE +KR+  K
Sbjct:  125 AGAVASLVTQSIIVPVDVVSQRLMVND-RPSQPAPTPNTHASSSNTSSNGSQKAGLTTHHTR--AASTAASAPGGQNGFA-----------------------LARLIVQQDGVRGLYRGFGASVATFVPSSAIWWSAYGAYQKAIWHQYEGLTGRRAEGRMQARSPSEVVAVQTSSAVLSGVTSAVLTNPLDVVKTRLQVAMRQQDGQQPTFRGIAQKLIAEEGPKGLLRGVAPRITSTALWSTCMVTTYEFLKRICLK 358          
BLAST of mRNA_H-elongata_contig57866.13261.1 vs. uniprot
Match: A0A7S4NRY9_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NRY9_GUITH)

HSP 1 Score: 127 bits (320), Expect = 2.440e-31
Identity = 83/252 (32.94%), Postives = 125/252 (49.60%), Query Frame = 0
Query:    3 AGAASSTVTQFFTVPIDVISQKMMVNGPRGGQVVPTAAAARGEARPAGEMAVATASDQQGTLRRTVAGAGGGSGGTSCEGIQARQGEERGEGRRHISAQNVARQVYRESGLRGFYRGIGVSILQFAPTSAIWWAAYGLYSKAFIQALENFYPSQLPALTAERRKIGAQAAAGLCTGMTTVILTNPLDVLRTRLQVQGRHGDNRTLRSEYRALIAESGPGGLLRGLVPRMLAMAPASVLIVTVYELIKRLSRK 254
            AG  +S V+Q   VPID++SQK M+N   G                          D  G+L                                     +V++++ R+ G++GFY+G G S+  +AP+SAIWW +YG Y +  +Q+  +F P      T+   K   +A+AG   G+   + TNP+DV RTRLQV+G   D   LR+  R L  + GP  LL+G+  R++A  P+S++IVTVYEL+KRLS++
Sbjct:  133 AGGCASLVSQTIVVPIDIVSQKQMMNFGTG--------------------------DSNGSLV------------------------------------HVSKEILRQDGVKGFYKGFGASLCVYAPSSAIWWGSYG-YLRERLQS--HFMP------TSHASKRLTEASAGASAGLVAAVATNPIDVARTRLQVEGHPRDGSNLRTTLRHLWCQEGPKSLLKGVQARIMASVPSSIMIVTVYELVKRLSKR 313          
BLAST of mRNA_H-elongata_contig57866.13261.1 vs. uniprot
Match: UPI0018F4016C (solute carrier family 25 member 44 n=1 Tax=Tachyglossus aculeatus TaxID=9261 RepID=UPI0018F4016C)

HSP 1 Score: 121 bits (303), Expect = 5.970e-29
Identity = 85/250 (34.00%), Postives = 119/250 (47.60%), Query Frame = 0
Query:    3 AGAASSTVTQFFTVPIDVISQKMMVNGPRGGQVVPTAAAARGEARPAGEMAVATASDQQGTLRRTVAGAGGGSGGTSCEGIQARQGEERGEGRRHISAQNVARQVYRESGLRGFYRGIGVSILQFAPTSAIWWAAYGLYSKAFIQALENFYPSQLPALTAERRKIGAQAAAGLCTGMTTVILTNPLDVLRTRLQVQGRHGDNRTLRSEYRALIAESGPGGLLRGLVPRMLAMAPASVLIVTVYELIKRLS 252
            AG ++S V Q  TVPIDV+SQ +MV               RG  +  G   +A  +  +GTL RT                                 ++V RQ++R  GLRGFYRG   S+L + P SA WW  Y  Y+    + L    P   P L         QA +G     T   LTNP+DV+R R+QV+GR    +T    +R L+AE GP GL +GL  R++A  P+++++V  YE +K+LS
Sbjct:  115 AGGSASLVAQSITVPIDVVSQHLMVQR-------------RGPGQELGRFQLARGAGGRGTLGRT---------------------------------RDVVRQIFRADGLRGFYRGYVASLLTYIPNSAAWWPFYHFYA----EQLSRLCPKDCPHLL-------LQAISGPLAAATASTLTNPMDVIRARVQVEGRDSIVQT----FRQLMAEEGPWGLTKGLSARIIAATPSTIVVVVGYETLKKLS 303          
BLAST of mRNA_H-elongata_contig57866.13261.1 vs. uniprot
Match: A0A1V9ZQ95_9STRA (Mitochondrial Carrier (MC) Family n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQ95_9STRA)

HSP 1 Score: 120 bits (302), Expect = 8.670e-29
Identity = 84/252 (33.33%), Postives = 125/252 (49.60%), Query Frame = 0
Query:    3 AGAASSTVTQFFTVPIDVISQKMMVNGPRGGQVVPTAAAARGEARPAGEMAVATASDQQGTLRRTVAGAGGGSGGTSCEGIQARQGEERGEGRRHISAQNVARQVYRESGLRGFYRGIGVSILQFAPTSAIWWAAYGLYSKAFIQALENFYPSQLPALTAERRKIGAQAAAGLCTGMTTVILTNPLDVLRTRLQVQGRHGDNRTLRSEYRALIAESGPGGLLRGLVPRMLAMAPASVLIVTVYELIKRLSRK 254
            +GA +S V Q   VP+D++SQ+MM++G  G  +                        Q  T  RT             +G+ +                 +A+ +YR  G+RGFY+G   SIL +AP+SA+WW +YG+    + + L NF    +       R++ AQA  G   G+ T I+TNP+DV+RTR Q+  + G   T    ++ LI   G  GL  G V R++AM P+ VL++T YEL+KRLSRK
Sbjct:  123 SGATASVVNQTVIVPLDIVSQRMMIDGQGGPDM------------------------QSKTRHRT-------------QGLMS-----------------IAKDIYRTQGVRGFYKGYVPSILTYAPSSALWWGSYGVVWPHYYRLL-NFDIDPM------WRQMIAQAFGGGTAGVVTAIITNPMDVIRTRTQIHTQFGAVDT----FKYLIKREGIPGLWTGAVARVMAMGPSGVLVITAYELVKRLSRK 309          
BLAST of mRNA_H-elongata_contig57866.13261.1 vs. uniprot
Match: A0A369RWF2_9METZ (Solute carrier family 25 member 44 n=2 Tax=Trichoplax TaxID=10227 RepID=A0A369RWF2_9METZ)

HSP 1 Score: 121 bits (304), Expect = 1.170e-28
Identity = 86/270 (31.85%), Postives = 140/270 (51.85%), Query Frame = 0
Query:    3 AGAASSTVTQFFTVPIDVISQKMMVNGPRGGQVVPTAAAARGE-----------ARPAGEMAVATASDQQGTLRRTVAGAGGGSGGTSCEGIQARQGEE-------RGEGRRHISAQNVARQVYRESGLRGFYRGIGVSILQFAPTSAIWWAAYGLYSKAFIQALENFYPSQLPALTAERRKIGAQAAAGLCTGMTTVILTNPLDVLRTRLQVQGRHGDNRTLRSEYRALIAESGPGGLLRGLVPRMLAMAPASVLIVTVYELIKRLSRK 254
            AG A+S + Q F VPID++SQK+MV G +  +   + + +  +           ++    +A    +D+   +R   A A      +S +  +     +         +  +  SA+ +A ++++  G+RGFYRG  +SIL F P+SAIWW +Y  Y+      L  F P   P L        AQA AG   G+T+ +L NP+DV+RTR+QV     D +++ +  + LI E G  G  +G+  R+++MAP+S++I+  YE IK LS K
Sbjct:  113 AGGAASVIAQSFGVPIDIVSQKLMVQGQQAPESYTSHSPSLKKEIANQDQYDRKSKATTTIASRHTTDRPFAIRNPAAAASXXXXSSSQKSTKTINSPQFRSLYTLSQQDAKLKSAKTIANEIWKAYGIRGFYRGYLISILTFGPSSAIWWGSYAAYN----DLLSKFIPPNTPHLV-------AQATAGATAGITSAVLINPVDVIRTRMQVL----DTKSIIATTKTLIQEEGLAGFTKGMSARVISMAPSSIIIIISYETIKNLSAK 367          
BLAST of mRNA_H-elongata_contig57866.13261.1 vs. uniprot
Match: A0A7S1X816_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X816_9CHLO)

HSP 1 Score: 116 bits (291), Expect = 2.100e-28
Identity = 68/185 (36.76%), Postives = 104/185 (56.22%), Query Frame = 0
Query:   82 GIQARQGEERGEGRRHISAQNVARQVYRESGLRGFYRGIGVSILQFAPTSAIWWAAYGLYSKAFIQALENFYP------SQLPALTAERRKIGA-QAAAGLCTGMTTVILTNPLDVLRTRLQVQ--GRHGDNRTLRSEYRALIAESGPGGLLRGLVPRMLAMAPASVLIVTVYELIKRLSRKAPT 257
            G + R G++     ++ +     R +    G+RGFYRG+G S+  + P SAIWW+AYG Y +    A+E +          +  ++A    I A Q +A +  G+T+ ++TNPLDV++TR+QV   GR G   T    +R L+   G  GL+RG+VP+M   A  S  +V+VYE +KRL+ K PT
Sbjct:    9 GAKGRGGQDGSASPQYRNGLQAVRMIAASEGIRGFYRGLGPSLATYMPASAIWWSAYGAYQRLIWNAVEVWVDRGGAGQGSIEEVSARGSTIAAVQTSASVAAGLTSGVITNPLDVIKTRIQVAHTGRGGQVPTFMGVFRDLVRHDGVAGLMRGVVPKMANTALWSTCMVSVYEFLKRLAMKDPT 193          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57866.13261.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPC8_9PHAE2.320e-7573.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS61_ECTSI1.460e-7273.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YRA5_9STRA6.550e-4240.00Mitochondrial carrier domain-containing protein n=... [more]
A0A7S2V638_9STRA1.580e-3435.04Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A5J4Y3N1_9CHLO9.760e-3336.54Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2... [more]
A0A7S4NRY9_GUITH2.440e-3132.94Hypothetical protein n=2 Tax=Guillardia theta TaxI... [more]
UPI0018F4016C5.970e-2934.00solute carrier family 25 member 44 n=1 Tax=Tachygl... [more]
A0A1V9ZQ95_9STRA8.670e-2933.33Mitochondrial Carrier (MC) Family n=1 Tax=Thrausto... [more]
A0A369RWF2_9METZ1.170e-2831.85Solute carrier family 25 member 44 n=2 Tax=Trichop... [more]
A0A7S1X816_9CHLO2.100e-2836.76Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 166..254
e-value: 1.3E-18
score: 66.7
coord: 2..146
e-value: 1.6E-13
score: 50.4
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 61..144
score: 12.194
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 165..251
score: 18.458
IPR023395Mitochondrial carrier domain superfamilyGENE3D1.50.40.10coord: 1..266
e-value: 8.5E-38
score: 131.7
IPR023395Mitochondrial carrier domain superfamilySUPERFAMILY103506Mitochondrial carriercoord: 1..247
NoneNo IPR availablePANTHERPTHR46080:SF3MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN Jcoord: 2..254
NoneNo IPR availablePANTHERPTHR46080FAMILY NOT NAMEDcoord: 2..254
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 227..248
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..114
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 138..226
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 249..270
NoneNo IPR availableTMHMMTMhelixcoord: 226..248
NoneNo IPR availableTMHMMTMhelixcoord: 115..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57866contigH-elongata_contig57866:143..2576 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57866.13261.1mRNA_H-elongata_contig57866.13261.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig57866 63..3572 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig57866.13261.1 ID=prot_H-elongata_contig57866.13261.1|Name=mRNA_H-elongata_contig57866.13261.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=271bp
MTAGAASSTVTQFFTVPIDVISQKMMVNGPRGGQVVPTAAAARGEARPAG
EMAVATASDQQGTLRRTVAGAGGGSGGTSCEGIQARQGEERGEGRRHISA
QNVARQVYRESGLRGFYRGIGVSILQFAPTSAIWWAAYGLYSKAFIQALE
NFYPSQLPALTAERRKIGAQAAAGLCTGMTTVILTNPLDVLRTRLQVQGR
HGDNRTLRSEYRALIAESGPGGLLRGLVPRMLAMAPASVLIVTVYELIKR
LSRKAPTTPRATTSSEEIYS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018108Mitochondrial_sb/sol_carrier
IPR023395Mt_carrier_dom_sf