prot_H-elongata_contig57852.13260.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig57852.13260.1
Unique Nameprot_H-elongata_contig57852.13260.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length105
Homology
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BLAST of mRNA_H-elongata_contig57852.13260.1 vs. uniprot
Match: D8LNL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNL1_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 6.420e-31
Identity = 66/107 (61.68%), Postives = 78/107 (72.90%), Query Frame = 0 
Query:    1 WHLQAVVEPGDLLIAINGQSLGSNNFGFEDAIERCSRASMPRRGEAIWVLRFARMWGASAAEIECALGVEA-CGVFDAEGNPLH-LVTARLHPSAPPYFHLNSPTRQ 105
            ++L+A+VEPGDLL+AING+ L  + F FEDAI  CSRAS+PR      VLRFARM GASAAEIECA G +  C  FDA   P   LVTA+LHPSAP +F LN PTR+
Sbjct:  133 FYLKAIVEPGDLLVAINGKKLTGSRFSFEDAIAVCSRASLPR------VLRFARMKGASAAEIECAFGADVVCATFDAMDAPQQRLVTAQLHPSAPSHFFLNPPTRR 233
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BLAST of mRNA_H-elongata_contig57852.13260.1 vs. uniprot
Match: A0A835Z599_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z599_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 8.630e-13
Identity = 44/107 (41.12%), Postives = 57/107 (53.27%), Query Frame = 0 
Query:    3 LQAVVEPGDLLIAINGQSLGSNNFGFEDAIERCSRASMPRRGEAIWVLRFARMWGASAAEIECALGVEACGVFDAEGNPL-----HLVTARLHPSAPPYFHLNSPTR 104
            L  V++P DL++A+NG+ LG   F FE AI   S A  PR       LRFAR+      E+E +  V  C  FD +  P       LVTA++ P AP +F LN PTR
Sbjct:  119 LTTVIQPRDLIVAVNGRVLGGAAFTFEKAIAMLSTAPPPR------TLRFARIPALDPLEVELSTRVTPCATFDIQLPPSPSDMPRLVTAQIDPGAPAFFILNPPTR 219
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57852.13260.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LNL1_ECTSI6.420e-3161.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z599_9STRA8.630e-1341.12Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57852contigH-elongata_contig57852:36..1462 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57852.13260.1mRNA_H-elongata_contig57852.13260.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig57852 36..1462 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig57852.13260.1 ID=prot_H-elongata_contig57852.13260.1|Name=mRNA_H-elongata_contig57852.13260.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=105bp
WHLQAVVEPGDLLIAINGQSLGSNNFGFEDAIERCSRASMPRRGEAIWVL
RFARMWGASAAEIECALGVEACGVFDAEGNPLHLVTARLHPSAPPYFHLN
SPTRQ
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