prot_H-elongata_contig57824.13251.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig57824.13251.1
Unique Nameprot_H-elongata_contig57824.13251.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length388
Homology
BLAST of mRNA_H-elongata_contig57824.13251.1 vs. uniprot
Match: D7G8N6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8N6_ECTSI)

HSP 1 Score: 293 bits (750), Expect = 8.030e-95
Identity = 151/264 (57.20%), Postives = 183/264 (69.32%), Query Frame = 0
Query:  142 LIREPGTSYESDIGQSTLLKSWSARYTKTRR-------------TEDLRSGPPVRKTHDGEVT---KDGKWTNLILSFVVNGETIHERERMFSFLHLFHSASTHPKCHLMGNSLVDRILLDNRLSSTLSESTWTTTALHHGLVYGTQGPLTHPSRNSANAWMGIGAIPTCESVLKETKNMSALGADHVDMQRWTEIELPFSDFLLNARLVLTRQALKNDIALSLHEAIFLSCIVHATDHVMLFRVYWGRVFNFNPHG--KLGNW 387
            +IR  G +Y+S IG+STL+KSWS RYTKTRR             TE   +    +K  D        +G W N I+SFVVNGE  H RERM+  LH +HS S H KCH+MGNSL DRIL+D+R++  LSESTWTTTALHHGL YGTQGPLTHP RN  N W G+GA+ T +SV+ E  NMS+LGADH D +RW ++ELPF+DFLLNARLVLTR   KNDI   LHEA+FLSCIVHA+DH ++ R+ WG+VFN +     K G W
Sbjct:    1 MIRPVGVTYQSGIGKSTLIKSWSMRYTKTRRRPQPLPGAKELTPTEKQAAVAAAKKQADYNPEPWKNNGVWENKIVSFVVNGEAWHSRERMYGLLHHYHSGSAHTKCHMMGNSLADRILVDDRVTEKLSESTWTTTALHHGLQYGTQGPLTHP-RNERNKWTGLGAVATRDSVVAEGDNMSSLGADHADKKRWADLELPFADFLLNARLVLTRVMKKNDIPPDLHEALFLSCIVHASDHTLIHRIQWGKVFNLDTTNTFKPGTW 263          
BLAST of mRNA_H-elongata_contig57824.13251.1 vs. uniprot
Match: A0A6H5J9N5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9N5_9PHAE)

HSP 1 Score: 230 bits (587), Expect = 2.580e-69
Identity = 141/340 (41.47%), Postives = 190/340 (55.88%), Query Frame = 0
Query:   56 YYVKWIMSQILAMYSLIFWRTLVDDDDIVRVFEETSIIIALRRD----HEAEKAEREAFNALKACTEEKAQPLLETRHYYIDVKRCELDLLIREPGTSYESDIGQSTLLKSWSARYTKTRRT-----------EDLRSGPPVRKTHDGEVTKDGKWTNLILSFVVNGETIHERERMFSFLHLFHSASTHPKCHLMGNSLVDRILLDNRLSSTLSESTWTTTALHHGLVYGTQGPLTHPSRNSANAWMGIGAIPTCESVLKETKNMSALG-ADHVDMQRWTEIELPFSDFLLNARLVLTRQALKNDIALSLHEAIFLSCIVHATDHVMLFRVYWGRVFNFN 379
            YY++W ++ +L ++S  FWR     DD+  + E TS+I  LR       +A + E+ A +           P+ E R YYIDVK C L+ + R+PG++YE   G    +K WS  YTKTR                RSG     +H        KW     SF+VNG+ + +     SFLH++ + S+H KCH++GNSLV RI  D  L   L ESTWTTT LH  L+ GT GPLT+P R + N WMGIG   + +SV+ ET NM+ LG ADH    RWTE++LP +DF+L AR VL R    N I + L EA+FLS I+HA DHV+  R+ WG  F  +
Sbjct:    6 YYIRWPLAVLLGVWSAFFWRA-PTKDDVAALIEGTSLITLLRHGLPPGTDASEEEQPATS-----------PMREERRYYIDVKTCLLEHVTRQPGSTYEE--GVVFPIKFWSMSYTKTRSIGRSSXXXXXXXXXXRSGSDADTSHGKP-----KWEVRFQSFIVNGKEVTDPASQMSFLHVYLTCSSHAKCHVLGNSLVQRIYSDELLKDKLMESTWTTTWLHSALMEGTHGPLTYP-RTTTNKWMGIGCPASHKSVVAETLNMTPLGGADHARTARWTELDLPLADFMLGARRVLLRAMHDNQIPMDLLEALFLSVIMHAVDHVLADRIMWGLNFKLD 325          
BLAST of mRNA_H-elongata_contig57824.13251.1 vs. uniprot
Match: A0A6H5LBR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBR7_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 2.690e-40
Identity = 87/189 (46.03%), Postives = 104/189 (55.03%), Query Frame = 0
Query:  142 LIREPGTSYESDIGQSTLLKSWSARYTKTRR-----TEDLRSGPP-----------VRKTHDGEVTK------------------------------------DGKWTNLILSFVVNGETIHERERMFSFLHLFHSASTHPKCHLMGNSLVDRILLDNRLSSTLSESTWTTTALHHGLVYGTQGPLTHP 278
            +IR  G +Y+S IG+STL+KSWS RYTKTRR     T   R   P           +   H  + +K                                    +G W N I+SFVVNGE  H RERM+  LH +HS S H KCH+MGNSL DRIL+D+R++  LSESTWTTTALHHGL YGTQGPLTHP
Sbjct:    1 MIRPVGVTYQSGIGKSTLIKSWSMRYTKTRRRPQQMTRSRRFLSPLVRSCAQSHRFINNCHTVDRSKPKQSLPGAKELTPAEKQAAVAAAKKQADYNPEPWKNNGVWENKIVSFVVNGEAWHSRERMYGLLHHYHSGSAHTKCHMMGNSLADRILVDDRVTEKLSESTWTTTALHHGLQYGTQGPLTHP 189          
BLAST of mRNA_H-elongata_contig57824.13251.1 vs. uniprot
Match: A0A6P5A8U5_BRABE (LOW QUALITY PROTEIN: uncharacterized protein LOC109483924 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5A8U5_BRABE)

HSP 1 Score: 103 bits (256), Expect = 6.810e-21
Identity = 95/329 (28.88%), Postives = 154/329 (46.81%), Query Frame = 0
Query:   44 LYHRHHLIQIPVYYVKWIMSQILAMYSLIFWRTLVDDDDIVRVFEETSIIIALRRDHEAEKAEREAFNALKACTEEKAQPLLETRHYYIDVKRCELDLLIREPGTSYESDIGQSTLLKSWSARYTKTRRTEDLRSGPPVRKTHDGEVTKDGKWTNLILSFVVNGETIHERERMFSFLHLFHSASTHPKCHLMGNSLVD-------RILLDNRLSSTLSESTWTTTALHHGLVYGTQGPLTHPSRNSANAWMGIGAIPTCESVLKETKNMSALGADHVDMQRW-TEIELPFSDFLLNARLVLTRQALKNDIALSLHEAIFLSCIVHATDH 364
            L+ RHHL+Q P+Y ++WI + + ++Y L+F   +  D DIV   E T++ + +R   + +  E                       Y + V+ C+L  L       Y+        LK+ S RYTK                        GK    +L F  NG  I  R ++FS ++ +H+ S H K HL  NSL         R ++ N +  TL ES++T+  LH+GL++ +   L      + + ++G G + T ES+++E++NMSAL A H  M  W +  +  F+  L  +RL L R   ++ + L L +A+F   IVH+ DH
Sbjct:   26 LFRRHHLLQSPMYLIRWIYAALYSLY-LLFVMRVPTDKDIVGYIENTTMGMLIRPATDGKSGE-----------------------YEVTVRDCKLRAL-----GGYK--------LKNMSLRYTK------------------------GKIGVQVLCFTRNGVRISNRCQIFSTIYFYHTHSLHTKSHLFSNSLXXXXXXCLVRHIVHNDVK-TLQESSYTSIPLHYGLLHSSVSALAWDG--NVSRYLGYGHVGTRESLVEESRNMSAL-ARHQAMDHWKSHGKESFAGKLYRSRLALQRVMERHGVDLKLLDALFNHTIVHSVDH 289          
BLAST of mRNA_H-elongata_contig57824.13251.1 vs. uniprot
Match: A0A6P5AKS3_BRABE (uncharacterized protein LOC109483926 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5AKS3_BRABE)

HSP 1 Score: 101 bits (252), Expect = 2.020e-20
Identity = 95/322 (29.50%), Postives = 152/322 (47.20%), Query Frame = 0
Query:   44 LYHRHHLIQIPVYYVKWIMSQILAMYSLIFWRTLVDDDDIVRVFEETSIIIALRRDHEAEKAEREAFNALKACTEEKAQPLLETRHYYIDVKRCELDLLIREPGTSYESDIGQSTLLKSWSARYTKTRRTEDLRSGPPVRKTHDGEVTKDGKWTNLILSFVVNGETIHERERMFSFLHLFHSASTHPKCHLMGNSLVDRILLDNRLSSTLSESTWTTTALHHGLVYGTQGPLTHPSRNSANAWMGIGAIPTCESVLKETKNMSALGADHVDMQRW-TEIELPFSDFLLNARLVLTRQALKNDIALSLHEAIFLSCIVHATDH 364
            L+ RHHL+Q P+YY++WI +   ++Y L F      D DIV   E T++++ +R   +    E                       Y + V+ C+L    R  G  Y+        LK+ S RY                        K GK    +LSF  NG  +  R ++FS ++ +H+ S H K HL  NSLV R ++DN +   L ES++T+  LH+ L++ +   L      + + ++G G     ES+++E++NMSAL A H  M+RW +  +  F+  LL +RL L     +++I   L + +F   IVH+ DH
Sbjct:   21 LFRRHHLLQSPMYYIRWIYAAFYSLYLLFFMEP-PTDRDIVGYIENTTMVMLIRPAADGRLGE-----------------------YEVTVRDCKL----RASG-GYK--------LKNMSLRY------------------------KRGKRGVRLLSFTRNGVRMSNRGQIFSTVYFYHTHSFHTKSHLFSNSLV-RHIVDNNVKI-LQESSYTSIPLHYELLHSSLSVLEWDG--NVSRYLGYGGACIRESLVEESRNMSAL-AGHQAMERWKSHGKDSFAGKLLRSRLALQGVMERHEIDPKLLDPLFNHVIVHSLDH 276          
BLAST of mRNA_H-elongata_contig57824.13251.1 vs. uniprot
Match: UPI001604557D (uncharacterized protein LOC118418579 n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001604557D)

HSP 1 Score: 89.0 bits (219), Expect = 2.070e-16
Identity = 65/178 (36.52%), Postives = 101/178 (56.74%), Query Frame = 0
Query:  192 KDGKWTNLILSFVVNGETIHERERMFSFLHLFHSASTHPKCHLMGNSLVDRILLDNRLSSTLSESTWTTTALHHGLVYGTQGPLTHPSRNSANAWMGIGAIPTCESVLKETKNMSALGADHVDMQRWTEIELPFSDFLLNARLVLTRQAL-----KNDIALSLHEAIFLSCIVHATDH 364
            K G+    IL F  NGE I +  ++FSF   + + S+H  CHL  NSLV  I+  +R   TL EST+T+  LH+GL++    PL   S  + ++++ +G + T ESV+KE+KNMSA    H   +RW   +L   + LL  +L  +R+AL     ++++   L E +F   +VH+ DH
Sbjct:    6 KKGEDGVKILHFTRNGEEITDMSQIFSFWFFYGTLSSHANCHLFSNSLVRHIV--DRDLKTLQESTYTSIPLHYGLLHSPISPL--QSDGNVSSFLAVGVVGTRESVMKESKNMSAWEG-HQSGRRW---DLLGQESLLY-KLFRSRRALQGVMKRHEVDQKLLEPLFNHIVVHSMDH 174          
BLAST of mRNA_H-elongata_contig57824.13251.1 vs. uniprot
Match: C3Z144_BRAFL (Uncharacterized protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Z144_BRAFL)

HSP 1 Score: 90.1 bits (222), Expect = 2.350e-16
Identity = 66/178 (37.08%), Postives = 101/178 (56.74%), Query Frame = 0
Query:  192 KDGKWTNLILSFVVNGETIHERERMFSFLHLFHSASTHPKCHLMGNSLVDRILLDNRLSSTLSESTWTTTALHHGLVYGTQGPLTHPSRNSANAWMGIGAIPTCESVLKETKNMSALGADHVDMQRWTEIELPFSDFLLNARLVLTRQAL-----KNDIALSLHEAIFLSCIVHATDH 364
            K G+    IL F  NGE I +  ++FSF   + + S+H KCHL  NSLV  I+  +R   TL EST+T+  LH+GL++    PL   S  + ++++ +G + T ESV+KE+KNMSA    H   +RW   +L   + LL  +L  +R+AL     ++ +   L E +F   +VH+ DH
Sbjct:  114 KKGEDGVKILHFTRNGEEISDMSQIFSFWFFYGTLSSHAKCHLFSNSLVRHIV--DRDLKTLQESTYTSIPLHYGLLHSPISPL--QSDGNVSSFLAVGVVGTRESVMKESKNMSAWEG-HQSGRRW---DLLGQESLLY-KLFRSRRALQGVMKRHGVDQKLLEPLFNHIVVHSMDH 282          
BLAST of mRNA_H-elongata_contig57824.13251.1 vs. uniprot
Match: UPI00160002B3 (uncharacterized protein LOC118410277 n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI00160002B3)

HSP 1 Score: 87.0 bits (214), Expect = 2.690e-15
Identity = 69/196 (35.20%), Postives = 106/196 (54.08%), Query Frame = 0
Query:  192 KDGKWTNLILSFVVNGETIHERERMFSFLHLFHSASTHPKCHLMGNSLVDRILLDNRLSSTLSESTWTTTALHHGLVYGTQGPLTHPSRNSANAWMGIGAIPTCESVLKETKNMSALGADHVDMQRWTEI-ELPFSDFLLNARLVLTRQALKNDIALSLHEAIFLSCIVHATDHVMLFRVYWGRVFNFNPHGKLGN 386
            K GK    +L+F  NG  +  R  +FS ++ +H  S H K HL  NSLV R ++DN +  TL ES++T+  LH+ L++ +   L      S   ++G G +   ESV+KE++NMSAL   H  ++RW    +  F+  L  +RL L     ++DIA  L +A+F   IVH+ DH  +    + R F+ +P  K  N
Sbjct:  114 KTGKNGVQVLNFTRNGVDVTNRCEIFSTIYFYHIYSMHTKSHLFSNSLV-RHIVDNDVH-TLQESSYTSIPLHYELLHSSLSVLEWGGNMSR--YLGYGGVCIRESVVKESRNMSALEG-HQAVRRWNSHGKDSFAGKLFRSRLALQSVMERHDIAPKLLDALFNHTIVHSVDHHGISEWSYLR-FSLHPWDKNCN 303          
BLAST of mRNA_H-elongata_contig57824.13251.1 vs. uniprot
Match: A0A8K0F0A4_BRALA (Hypp5078 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0F0A4_BRALA)

HSP 1 Score: 80.1 bits (196), Expect = 6.030e-13
Identity = 58/173 (33.53%), Postives = 95/173 (54.91%), Query Frame = 0
Query:  192 KDGKWTNLILSFVVNGETIHERERMFSFLHLFHSASTHPKCHLMGNSLVDRILLDNRLSSTLSESTWTTTALHHGLVYGTQGPLTHPSRNSANAWMGIGAIPTCESVLKETKNMSALGADHVDMQRWTEIELPFSDFLLNARLVLTRQALKNDIALSLHEAIFLSCIVHATDH 364
            K G+    IL F  NG+ + +R +MFS ++ +H+ S H K HL  NSLV R ++DN +  TL ES++T+  LH+ L++ +   L      S   ++G G     ES+++E++NMSAL     +    +  +  F+  L  +RL L     ++ I  +L +A+F   IVH+ DH
Sbjct:  113 KTGRNGVQILHFTRNGDDVTDRSQMFSTIYFYHTHSMHTKSHLFSNSLV-RHIVDNDVK-TLQESSYTSMPLHYVLLHSSLSVLMWDGNMSQ--YLGYGDACIRESLVEESRNMSALDGHRAEEHWNSHGKDTFAGKLFRSRLALRDVMGRHGIDPTLLDALFNHTIVHSVDH 281          
BLAST of mRNA_H-elongata_contig57824.13251.1 vs. uniprot
Match: A0A8K0F328_BRALA (Hypp5079 protein n=2 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0F328_BRALA)

HSP 1 Score: 79.0 bits (193), Expect = 1.490e-12
Identity = 61/174 (35.06%), Postives = 92/174 (52.87%), Query Frame = 0
Query:  192 KDGKWTNLILSFVVNGETIHERERMFSFLHLFHSASTHPKCHLMGNSLVDRILLDNRLSSTLSESTWTTTALHHGLVYGTQGPLTHPSRNSANAWMGIGAIPTCESVLKETKNMSALGADHVDMQRWT-EIELPFSDFLLNARLVLTRQALKNDIALSLHEAIFLSCIVHATDH 364
            K G+    IL+F  NG  +  R  MFS ++ +H  S H K HL  NSLV R ++DN +  TL ES++T+  LH+ L++ +   L      S   ++G G     ES+L+E++NMSAL     +  RW    +  F+  L  +R  L     ++DI   L +A+F   IVH+ DH
Sbjct:  114 KAGRNGVQILNFTRNGVEVGNRSEMFSTVYFYHIHSMHTKSHLFSNSLV-RHIVDNDVK-TLQESSYTSIPLHYVLLHSSLSVLMWDGNMSR--YLGYGNACIRESILEESRNMSALEGHRAE-HRWNLHGKNTFAGKLFRSRQALQSVMERHDIDPKLLDALFNHTIVHSVDH 282          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57824.13251.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7G8N6_ECTSI8.030e-9557.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9N5_9PHAE2.580e-6941.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LBR7_9PHAE2.690e-4046.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6P5A8U5_BRABE6.810e-2128.88LOW QUALITY PROTEIN: uncharacterized protein LOC10... [more]
A0A6P5AKS3_BRABE2.020e-2029.50uncharacterized protein LOC109483926 n=1 Tax=Branc... [more]
UPI001604557D2.070e-1636.52uncharacterized protein LOC118418579 n=1 Tax=Branc... [more]
C3Z144_BRAFL2.350e-1637.08Uncharacterized protein n=1 Tax=Branchiostoma flor... [more]
UPI00160002B32.690e-1535.20uncharacterized protein LOC118410277 n=1 Tax=Branc... [more]
A0A8K0F0A4_BRALA6.030e-1333.53Hypp5078 protein n=1 Tax=Branchiostoma lanceolatum... [more]
A0A8K0F328_BRALA1.490e-1235.06Hypp5079 protein n=2 Tax=Branchiostoma lanceolatum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 75..387
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..74
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..55
NoneNo IPR availableTMHMMTMhelixcoord: 55..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57824contigH-elongata_contig57824:440..3626 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57824.13251.1mRNA_H-elongata_contig57824.13251.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig57824 410..3626 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig57824.13251.1 ID=prot_H-elongata_contig57824.13251.1|Name=mRNA_H-elongata_contig57824.13251.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=388bp
MKQRKRADGSHSPLSRPLSSPPHPGAKAISTRLHVKSHHLTGKLYHRHHL
IQIPVYYVKWIMSQILAMYSLIFWRTLVDDDDIVRVFEETSIIIALRRDH
EAEKAEREAFNALKACTEEKAQPLLETRHYYIDVKRCELDLLIREPGTSY
ESDIGQSTLLKSWSARYTKTRRTEDLRSGPPVRKTHDGEVTKDGKWTNLI
LSFVVNGETIHERERMFSFLHLFHSASTHPKCHLMGNSLVDRILLDNRLS
STLSESTWTTTALHHGLVYGTQGPLTHPSRNSANAWMGIGAIPTCESVLK
ETKNMSALGADHVDMQRWTEIELPFSDFLLNARLVLTRQALKNDIALSLH
EAIFLSCIVHATDHVMLFRVYWGRVFNFNPHGKLGNW*
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