prot_H-elongata_contig57733.13241.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig57733.13241.1
Unique Nameprot_H-elongata_contig57733.13241.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length63
Homology
BLAST of mRNA_H-elongata_contig57733.13241.1 vs. uniprot
Match: A0A6H5JQY5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQY5_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 1.880e-28
Identity = 53/56 (94.64%), Postives = 54/56 (96.43%), Query Frame = 0
Query:    1 VHNVPEGLAVALVLHPRGVSKLNTALWCVFTSLPQPLMAVPAFLFVGQFMPFLPVS 56
            VHNVPEGLAVALVLHPRGVSKLNT LWCVFTSLPQPLMAVPAFLFVGQFMPFLP+ 
Sbjct:  305 VHNVPEGLAVALVLHPRGVSKLNTGLWCVFTSLPQPLMAVPAFLFVGQFMPFLPIG 360          
BLAST of mRNA_H-elongata_contig57733.13241.1 vs. uniprot
Match: A0A835Z5V1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5V1_9STRA)

HSP 1 Score: 102 bits (254), Expect = 5.870e-25
Identity = 48/56 (85.71%), Postives = 51/56 (91.07%), Query Frame = 0
Query:    1 VHNVPEGLAVALVLHPRGVSKLNTALWCVFTSLPQPLMAVPAFLFVGQFMPFLPVS 56
            VHNVPEGLAVALVLHPRGVSKLNT LWC+FTSLPQPLMAV A+ FV QF+PFLPV 
Sbjct:  188 VHNVPEGLAVALVLHPRGVSKLNTGLWCIFTSLPQPLMAVLAYAFVEQFLPFLPVG 243          
BLAST of mRNA_H-elongata_contig57733.13241.1 vs. uniprot
Match: A0A836CI09_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI09_9STRA)

HSP 1 Score: 101 bits (252), Expect = 1.610e-24
Identity = 47/56 (83.93%), Postives = 51/56 (91.07%), Query Frame = 0
Query:    1 VHNVPEGLAVALVLHPRGVSKLNTALWCVFTSLPQPLMAVPAFLFVGQFMPFLPVS 56
            VHN+PEGLAVALVLHPRGVSKLNT LWC+FTSLPQPLMAV A+ FV QF+PFLPV 
Sbjct:  207 VHNIPEGLAVALVLHPRGVSKLNTGLWCIFTSLPQPLMAVLAYKFVEQFLPFLPVG 262          
BLAST of mRNA_H-elongata_contig57733.13241.1 vs. uniprot
Match: A0A7S2UW33_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UW33_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 2.130e-24
Identity = 46/56 (82.14%), Postives = 51/56 (91.07%), Query Frame = 0
Query:    1 VHNVPEGLAVALVLHPRGVSKLNTALWCVFTSLPQPLMAVPAFLFVGQFMPFLPVS 56
            VHNVPEGLAVALVL+PR VSKLN+ALWCVFTSLPQPLMAVPA+LF+  F+P LPV 
Sbjct:   59 VHNVPEGLAVALVLNPRKVSKLNSALWCVFTSLPQPLMAVPAYLFIEHFIPLLPVG 114          
BLAST of mRNA_H-elongata_contig57733.13241.1 vs. uniprot
Match: A0A812VWP9_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VWP9_SYMMI)

HSP 1 Score: 95.5 bits (236), Expect = 8.030e-24
Identity = 43/56 (76.79%), Postives = 49/56 (87.50%), Query Frame = 0
Query:    1 VHNVPEGLAVALVLHPRGVSKLNTALWCVFTSLPQPLMAVPAFLFVGQFMPFLPVS 56
            VHN+PEGLAVALVL+ RGVSKL TALWC+FTS+PQP+MAVPAF F+ QF P LPV 
Sbjct:   17 VHNIPEGLAVALVLNSRGVSKLRTALWCIFTSIPQPIMAVPAFFFIEQFKPLLPVG 72          
BLAST of mRNA_H-elongata_contig57733.13241.1 vs. uniprot
Match: A0A7S1FWC4_9STRA (Hypothetical protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FWC4_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.580e-22
Identity = 43/56 (76.79%), Postives = 50/56 (89.29%), Query Frame = 0
Query:    1 VHNVPEGLAVALVLHPRGVSKLNTALWCVFTSLPQPLMAVPAFLFVGQFMPFLPVS 56
            VHNVPEGLAVA+VL PRGVSKL+ ALWC+FTS+PQP+MAVPA+LFV  F+PFLP  
Sbjct:  124 VHNVPEGLAVAVVLLPRGVSKLSAALWCIFTSVPQPIMAVPAYLFVEHFIPFLPAG 179          
BLAST of mRNA_H-elongata_contig57733.13241.1 vs. uniprot
Match: A0A7S1FXS5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FXS5_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 7.960e-22
Identity = 43/56 (76.79%), Postives = 50/56 (89.29%), Query Frame = 0
Query:    1 VHNVPEGLAVALVLHPRGVSKLNTALWCVFTSLPQPLMAVPAFLFVGQFMPFLPVS 56
            VHNVPEGLAVA+VL PRGVSKL+ ALWC+FTS+PQP+MAVPA+LFV  F+PFLP  
Sbjct:  220 VHNVPEGLAVAVVLLPRGVSKLSAALWCIFTSVPQPIMAVPAYLFVEHFIPFLPAG 275          
BLAST of mRNA_H-elongata_contig57733.13241.1 vs. uniprot
Match: A0A1J1EKT9_THETH (Zinc/iron permease n=1 Tax=Thermus thermophilus TaxID=274 RepID=A0A1J1EKT9_THETH)

HSP 1 Score: 87.8 bits (216), Expect = 3.870e-21
Identity = 41/56 (73.21%), Postives = 47/56 (83.93%), Query Frame = 0
Query:    1 VHNVPEGLAVALVLHPRGVSKLNTALWCVFTSLPQPLMAVPAFLFVGQFMPFLPVS 56
            +HN+PEGLA++LVL PRGVS L  ALW VF+SLPQPLMAVPA+LFV  F PFLPV 
Sbjct:    1 MHNIPEGLAISLVLVPRGVSALGAALWSVFSSLPQPLMAVPAYLFVEAFQPFLPVG 56          
BLAST of mRNA_H-elongata_contig57733.13241.1 vs. uniprot
Match: A0A430UT04_THESC (ZIP family metal transporter (Fragment) n=3 Tax=Thermus scotoductus TaxID=37636 RepID=A0A430UT04_THESC)

HSP 1 Score: 85.9 bits (211), Expect = 3.520e-20
Identity = 42/56 (75.00%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    1 VHNVPEGLAVALVLHPRGVSKLNTALWCVFTSLPQPLMAVPAFLFVGQFMPFLPVS 56
            VHN+PEGLA++LVL PRGVS L  ALW VF+SLPQPLMAVPAFLFV  F P LPV 
Sbjct:   18 VHNIPEGLAISLVLIPRGVSVLGAALWSVFSSLPQPLMAVPAFLFVEVFKPALPVG 73          
BLAST of mRNA_H-elongata_contig57733.13241.1 vs. uniprot
Match: A0A7S2PRV5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PRV5_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 3.760e-20
Identity = 39/56 (69.64%), Postives = 47/56 (83.93%), Query Frame = 0
Query:    1 VHNVPEGLAVALVLHPRGVSKLNTALWCVFTSLPQPLMAVPAFLFVGQFMPFLPVS 56
            VHN+PEGLAVA+VL PR VSKL  ++WC+ TSLPQPLMAVPAF+FV  F+P LP+ 
Sbjct:   89 VHNIPEGLAVAIVLLPRRVSKLTASMWCIATSLPQPLMAVPAFMFVNTFVPILPIG 144          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57733.13241.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQY5_9PHAE1.880e-2894.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z5V1_9STRA5.870e-2585.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CI09_9STRA1.610e-2483.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UW33_9STRA2.130e-2482.14Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A812VWP9_SYMMI8.030e-2476.79Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
A0A7S1FWC4_9STRA1.580e-2276.79Hypothetical protein n=3 Tax=Corethron hystrix Tax... [more]
A0A7S1FXS5_9STRA7.960e-2276.79Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A1J1EKT9_THETH3.870e-2173.21Zinc/iron permease n=1 Tax=Thermus thermophilus Ta... [more]
A0A430UT04_THESC3.520e-2075.00ZIP family metal transporter (Fragment) n=3 Tax=Th... [more]
A0A7S2PRV5_9STRA3.760e-2069.64Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11040:SF70coord: 1..55
NoneNo IPR availablePANTHERPTHR11040ZINC/IRON TRANSPORTERcoord: 1..55
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 62..62
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..61
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..38
NoneNo IPR availableTMHMMTMhelixcoord: 39..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57733contigH-elongata_contig57733:391..1274 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57733.13241.1mRNA_H-elongata_contig57733.13241.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig57733 391..1274 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig57733.13241.1 ID=prot_H-elongata_contig57733.13241.1|Name=mRNA_H-elongata_contig57733.13241.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp
VHNVPEGLAVALVLHPRGVSKLNTALWCVFTSLPQPLMAVPAFLFVGQFM
PFLPVSAVCFFL*
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