prot_H-elongata_contig57681.13236.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig57681.13236.1
Unique Nameprot_H-elongata_contig57681.13236.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length148
Homology
BLAST of mRNA_H-elongata_contig57681.13236.1 vs. uniprot
Match: A0A6H5L2R8_9PHAE (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2R8_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 8.420e-43
Identity = 88/156 (56.41%), Postives = 109/156 (69.87%), Query Frame = 0
Query:    1 MMLLPIAVFMGELFTWRE-GVDGFITRTDLHSYCYILMNFFAGGAGFFLNFAALWCVGATSATTYAVVNTVNNCPVSILGYFLFK-ATVTFTQLEFIVVNIIGGFIYSGGKIQATREKEI---------NGDVEAVPLVSGTQYEEETYKRSPGSR 145
            +++LP+AV  GE+FT     + GF+ R DLH+  Y+ +N  AG AGFFLNFAALWCV ATSATTYAVVNTVNN PVSILGY+L   A ++  Q EFIVVNI+GGFIYS  KI+  + KE          NGDVEA+PLV GT  + ++ + SPG R
Sbjct:  270 LIMLPLAVCFGEVFTLESTSLVGFLDRADLHTPTYLGINLGAGAAGFFLNFAALWCVSATSATTYAVVNTVNNFPVSILGYYLLPGARISHQQWEFIVVNIVGGFIYSAAKIKEQKAKERAEALLASQDNGDVEAIPLVGGTTDDLKS-RNSPGRR 424          
BLAST of mRNA_H-elongata_contig57681.13236.1 vs. uniprot
Match: A0A7S2S116_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S116_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 3.600e-21
Identity = 56/124 (45.16%), Postives = 73/124 (58.87%), Query Frame = 0
Query:    2 MLLPIAVFMGELFTWR----EGVDGFITRTDLHSYCYILMNFFAGGAGFFLNFAALWCVGATSATTYAVVNTVNNCPVSILGYFLFKATVTFTQLEFIVVNIIGGFIYSGGKIQATREKEINGD 121
            +LL +AV  GEL T      E   G     +     + L+N   G  GFFLNFA LWCVG TSATTYAV+ ++N  PV++LG  +FKA + F    FI++NI GG +YS  +IQAT  K+   D
Sbjct:  207 ILLVVAVLSGELRTLSSMSLENPGGLSVERN-----FALLNVVTGVNGFFLNFAQLWCVGTTSATTYAVIGSLNKIPVALLGSLIFKANLNFQGFIFILINIGGGLMYSYAQIQATVRKDEKDD 325          
BLAST of mRNA_H-elongata_contig57681.13236.1 vs. uniprot
Match: A0A7S2FDK8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FDK8_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 3.920e-20
Identity = 50/115 (43.48%), Postives = 71/115 (61.74%), Query Frame = 0
Query:    2 MLLPIAVFMGELFTWREGVDGFITRTDLHSYCYILMNFFAGGAGFFLNFAALWCVGATSATTYAVVNTVNNCPVSILGYFLFKATVTFTQLEFIVVNIIGGFIYSGGKIQATREK 116
            +L+P A   GE  T    ++     TD     +I +N  AG  GFFLN A+LWCV +TSATTYA+V +VN  PVS+LG +LF+  +T     +I++++ GGFIYS  K+Q  R +
Sbjct:  103 LLVPFAFSFGEFATISNTME---VVTDP---MFISINLVAGSMGFFLNLASLWCVSSTSATTYALVGSVNKIPVSLLGVWLFQTVITAQGASYIILSMCGGFIYSYVKLQEARTR 211          
BLAST of mRNA_H-elongata_contig57681.13236.1 vs. uniprot
Match: D8LTL4_ECTSI (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTL4_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 8.100e-20
Identity = 54/116 (46.55%), Postives = 72/116 (62.07%), Query Frame = 0
Query:    2 MLLPIAVFMGELFTWREGVDGFITRTDLHSYCYILMNFFAGGAGFFLNFAALWCVGATSATTYAVVNTVNNCPVSILGYFLFKATVTFTQLEFIVVNIIGGFIYSGGKIQATREKE 117
            +L P A  MG+ FT       F T   L +  Y+    F+G  G  LNFA+LWCVGATSATTYAVV +VN  P ++LGY LF + ++    EF++V++IGGF+YS  K+Q  R  E
Sbjct:  214 LLTPAAFMMGD-FTI------FWTTPQLRTVTYMTALLFSGVVGVLLNFASLWCVGATSATTYAVVGSVNVIPTALLGYQLFDSAISTQMGEFMLVSMIGGFMYSFAKLQEKRSLE 322          
BLAST of mRNA_H-elongata_contig57681.13236.1 vs. uniprot
Match: A0A7S2SW66_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW66_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.710e-19
Identity = 52/115 (45.22%), Postives = 73/115 (63.48%), Query Frame = 0
Query:    2 MLLPIAVFMGELFTWREGVDGFITRTDLHSYCYILMNFFAGGAGFFLNFAALWCVGATSATTYAVVNTVNNCPVSILGYFLFKATVTFTQLEFIVVNIIGGFIYSGGKIQATREK 116
            +LLP+A  +GE+ T    +D  IT  +     ++ +N  AG  GFFLN A+LWCV ATSATTYA+V +VN  PV++LG FLF A ++     +I V++ GGFIYS  K+  +  K
Sbjct:  207 LLLPLAFGLGEVDTALANLD-IITSLN-----FLFVNIVAGSMGFFLNLASLWCVSATSATTYALVGSVNKIPVALLGAFLFDAAISSQGAIYIGVSMCGGFIYSYVKLTESPRK 315          
BLAST of mRNA_H-elongata_contig57681.13236.1 vs. uniprot
Match: A0A7S3XRI4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRI4_HETAK)

HSP 1 Score: 86.3 bits (212), Expect = 1.340e-18
Identity = 46/113 (40.71%), Postives = 67/113 (59.29%), Query Frame = 0
Query:    3 LLPIAVFMGELFTWREGVDGFITRTDLHSYCYILMNFFAGGAGFFLNFAALWCVGATSATTYAVVNTVNNCPVSILGYFLFKATVTFTQLEFIVVNIIGGFIYSGGKIQATRE 115
            +L +A   GEL     G+  F    DL +  +   N + G  GF LN A+LWCVGA SATTYA+V ++N  PVS+LG+  F  T+T     +I ++++GGF+YS  K  A ++
Sbjct:   51 MLIMATLKGEL-----GI--FFNSPDLWTLPFFFTNLYTGVVGFGLNLASLWCVGANSATTYAIVGSLNKIPVSVLGFLFFDVTITAQSAIYITMSMLGGFLYSYAKHTAPKK 156          
BLAST of mRNA_H-elongata_contig57681.13236.1 vs. uniprot
Match: A0A7S1XWK5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XWK5_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 4.490e-18
Identity = 44/110 (40.00%), Postives = 69/110 (62.73%), Query Frame = 0
Query:    2 MLLPIAVFMGELFTWREGVDGFITRTDLHSYCYILMNFFAGGAGFFLNFAALWCVGATSATTYAVVNTVNNCPVSILGYFLFKATVTFTQLEFIVVNIIGGFIYSGGKIQ 111
            ++L +A+F GE     E         DL +  +  +N +AG  GF LN A+LWCVG+TSATTYAVV + N  P +I+G+FLF++ ++   + ++ + +IG FIYS  K++
Sbjct:  271 IMLTLALFKGEFGVLYEA------GMDLWTPAFTFINVYAGSVGFLLNLASLWCVGSTSATTYAVVGSFNKVPTAIVGWFLFQSPISPETVTYMTIAMIGSFIYSAAKLK 374          
BLAST of mRNA_H-elongata_contig57681.13236.1 vs. uniprot
Match: A0A836C853_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C853_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 4.180e-16
Identity = 45/113 (39.82%), Postives = 65/113 (57.52%), Query Frame = 0
Query:   37 MNFFAGGAGFFLNFAALWCVGATSATTYAVVNTVNNCPVSILGYFLFKATV---------------TFTQLEFIVVNIIGGFIYSGGKI----QATREKEINGDVEAVPLVSG 130
            +N FAG AGF LNFA+LWCVGATSATTYA+V +VN  P+ +LG+ LFK+ +               T     ++ +++ GGF+YS  K+    QA  E+  + +    P+  G
Sbjct:  301 LNLFAGAAGFCLNFASLWCVGATSATTYAIVGSVNKVPMMVLGWMLFKSPIVXXXXXXXXXXXXXXTAQSALYMTISLTGGFMYSWAKVRQAPQAATERPRDAERHLAPIKEG 413          
BLAST of mRNA_H-elongata_contig57681.13236.1 vs. uniprot
Match: L0PC84_PNEJ8 (GDP-mannose transporter n=1 Tax=Pneumocystis jirovecii (strain SE8) TaxID=1209962 RepID=L0PC84_PNEJ8)

HSP 1 Score: 58.9 bits (141), Expect = 6.700e-8
Identity = 27/76 (35.53%), Postives = 44/76 (57.89%), Query Frame = 0
Query:   35 ILMNFFAGGAGFFLNFAALWCVGATSATTYAVVNTVNNCPVSILGYFLFKATVTFTQLEFIVVNIIGGFIYSGGKI 110
            +L   F+ G    + + +LWC+ ATS+TTY+++  +N  PVSI G   FK   TF  +  I++    G +Y+ GK+
Sbjct:  112 LLSGVFSAG----IAYTSLWCIRATSSTTYSMIGALNKLPVSIFGLVFFKTPTTFLTISAIIIGFFSGVLYTIGKM 183          
BLAST of mRNA_H-elongata_contig57681.13236.1 vs. uniprot
Match: L1IT10_GUITC (TPT domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IT10_GUITC)

HSP 1 Score: 55.8 bits (133), Expect = 2.600e-6
Identity = 27/73 (36.99%), Postives = 44/73 (60.27%), Query Frame = 0
Query:   35 ILMNFFAGGA-GFFLNFAALWCVGATSATTYAVVNTVNNCPVSILGYFLFKATVTFTQLEFIVVNIIGGFIYS 106
            + M FF+ G  G  +    +WC+ ATS +TY++V  +N  P SILG F+F+  V+   L  + + +IGG ++S
Sbjct:  252 VQMAFFSTGVNGIVIALCTMWCIEATSGSTYSMVGALNKIPSSILGIFIFRNPVSVLNLVGVGIGLIGGVVFS 324          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57681.13236.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5L2R8_9PHAE8.420e-4356.41TPT domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2S116_9STRA3.600e-2145.16Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2FDK8_9STRA3.920e-2043.48Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
D8LTL4_ECTSI8.100e-2046.55TPT domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2SW66_9STRA1.710e-1945.22Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3XRI4_HETAK1.340e-1840.71Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1XWK5_9STRA4.490e-1840.00Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A836C853_9STRA4.180e-1639.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
L0PC84_PNEJ86.700e-835.53GDP-mannose transporter n=1 Tax=Pneumocystis jirov... [more]
L1IT10_GUITC2.600e-636.99TPT domain-containing protein n=1 Tax=Guillardia t... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11132SOLUTE CARRIER FAMILY 35coord: 22..114
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 109..147
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..83
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 89..108
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..34
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 57..62
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..56
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 84..88
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availableTMHMMTMhelixcoord: 64..83
NoneNo IPR availableTMHMMTMhelixcoord: 35..57
NoneNo IPR availableTMHMMTMhelixcoord: 87..106
IPR038736GDP-mannose transporter Vrg4-likePANTHERPTHR11132:SF251GDP-MANNOSE TRANSPORTER 1-RELATEDcoord: 22..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57681contigH-elongata_contig57681:170..2225 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57681.13236.1mRNA_H-elongata_contig57681.13236.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig57681 164..2225 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig57681.13236.1 ID=prot_H-elongata_contig57681.13236.1|Name=mRNA_H-elongata_contig57681.13236.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=148bp
MMLLPIAVFMGELFTWREGVDGFITRTDLHSYCYILMNFFAGGAGFFLNF
AALWCVGATSATTYAVVNTVNNCPVSILGYFLFKATVTFTQLEFIVVNII
GGFIYSGGKIQATREKEINGDVEAVPLVSGTQYEEETYKRSPGSRRP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038736Vrg4-like