prot_H-elongata_contig57566.13227.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig57566.13227.1
Unique Name	prot_H-elongata_contig57566.13227.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	240

Homology

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BLAST of mRNA_H-elongata_contig57566.13227.1 vs. uniprot
Match: A0A126WYY7_SARFS (Putative LOV domain-containing protein n=1 Tax=Sargassum fusiforme TaxID=590727 RepID=A0A126WYY7_SARFS)

HSP 1 Score: 335 bits (858), Expect = 1.960e-112
Identity = 167/192 (86.98%), Postives = 177/192 (92.19%), Query Frame = 0

Query:    1 AENDSLKGSIVGSLGERGRELVAKCAPEDAGGTLVTTNPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASSGFLQLTRYKLTEVLGRNCRFLQGPETDPRAVDKIRTAIEEGYDTSACLLNYRADGTTFWNQFFVAALRDGEGATVNYVGVQCKVGDDYARIVVTAQNKQLASLSAAAAASR 192
            AEN+SLKGSI+GSLG+ GRELVAKC+PEDA  TLVT NPTQATKILDDPDYSLVKALQTAQQNFVITDAS PDNPIVFAS+GFL+LTRYKL EVLGRNCRFLQGPETDPRAVDKIRTAI+EGYDTS CLLNYRAD TTFWNQFFVAALRDGEG TVNYVGVQCKVGDDYARIVV AQ KQLA   +AA ++R
Sbjct:   95 AENESLKGSIIGSLGQHGRELVAKCSPEDAESTLVTANPTQATKILDDPDYSLVKALQTAQQNFVITDASPPDNPIVFASNGFLELTRYKLNEVLGRNCRFLQGPETDPRAVDKIRTAIDEGYDTSVCLLNYRADDTTFWNQFFVAALRDGEGNTVNYVGVQCKVGDDYARIVVNAQKKQLARSGSAAGSTR 286

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BLAST of mRNA_H-elongata_contig57566.13227.1 vs. uniprot
Match: A0A126X4A7_9PHAE (Putative LOV domain-containing protein n=1 Tax=Sargassum thunbergii TaxID=127542 RepID=A0A126X4A7_9PHAE)

HSP 1 Score: 338 bits (866), Expect = 2.090e-112
Identity = 167/192 (86.98%), Postives = 178/192 (92.71%), Query Frame = 0

Query:    1 AENDSLKGSIVGSLGERGRELVAKCAPEDAGGTLVTTNPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASSGFLQLTRYKLTEVLGRNCRFLQGPETDPRAVDKIRTAIEEGYDTSACLLNYRADGTTFWNQFFVAALRDGEGATVNYVGVQCKVGDDYARIVVTAQNKQLASLSAAAAASR 192
            AEN+SLKGSI+GSLG+RGRELVAKC+PEDA  TLVT NPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFAS+GFL+LTRYKL EVLGRNCRFLQGPETDPRAVDKIRTAI+EGYDTS CLLNYRADGTTFWNQFFVAALRDG+G TVNYVGVQCKVGDDYARIVV AQ KQ A   + A ++R
Sbjct:  187 AENESLKGSIIGSLGQRGRELVAKCSPEDAESTLVTANPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASNGFLELTRYKLNEVLGRNCRFLQGPETDPRAVDKIRTAIDEGYDTSVCLLNYRADGTTFWNQFFVAALRDGDGNTVNYVGVQCKVGDDYARIVVNAQKKQFARSGSTAGSTR 378

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BLAST of mRNA_H-elongata_contig57566.13227.1 vs. uniprot
Match: A0A126X308_SARHM (Putative LOV domain-containing protein n=2 Tax=Sargassum TaxID=3015 RepID=A0A126X308_SARHM)

HSP 1 Score: 341 bits (874), Expect = 4.760e-111
Identity = 174/212 (82.08%), Postives = 185/212 (87.26%), Query Frame = 0

Query:    1 AENDSLKGSIVGSLGERGRELVAKCAPEDAGGTLVTTNPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASSGFLQLTRYKLTEVLGRNCRFLQGPETDPRAVDKIRTAIEEGYDTSACLLNYRADGTTFWNQFFVAALRDGEGATVNYVGVQCKVGDDYARIVVTAQNKQLASLSAAAAASRWAALPPTGQPSSNPPVAGMA 212
            AEN+SLKGSI+GSLG+RGRELVAKC+PEDA  TLVT NPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFAS+GFL+LTRYKL EVLGRNCRFLQGPETDPRAVDKIRTAI+EGYDTS CLLNYRADGTTFWNQFFVAALRDGEG TVNYVGVQCKVGDDYARIVV AQ KQLA   + A ++R        QP   P  +G A
Sbjct:  386 AENESLKGSIIGSLGQRGRELVAKCSPEDAESTLVTANPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASNGFLELTRYKLNEVLGRNCRFLQGPETDPRAVDKIRTAIDEGYDTSVCLLNYRADGTTFWNQFFVAALRDGEGNTVNYVGVQCKVGDDYARIVVNAQKKQLARSGSTAGSARRGPQTQREQPVQRPSTSGTA 597

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BLAST of mRNA_H-elongata_contig57566.13227.1 vs. uniprot
Match: A0A126X2D5_9PHAE (Putative LOV domain-containing protein n=1 Tax=Scytosiphon dotyi TaxID=180438 RepID=A0A126X2D5_9PHAE)

HSP 1 Score: 339 bits (870), Expect = 1.160e-110
Identity = 168/189 (88.89%), Postives = 178/189 (94.18%), Query Frame = 0

Query:    1 AENDSLKGSIVGSLGERGRELVAKCAPEDAGGTLVTTNPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASSGFLQLTRYKLTEVLGRNCRFLQGPETDPRAVDKIRTAIEEGYDTSACLLNYRADGTTFWNQFFVAALRDGEGATVNYVGVQCKVGDDYARIVVTAQNKQLASLSAAAA 189
            AENDSLKGSIVGSLGERGRELVAKC P D GG+LVT NP QATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFAS GFL+LTRYKLTEVLGRNCRFLQGPETDP+AVDKIR AI+EGYDTS CLLNYRADGTTFWNQFFVA+LRDG+G TVNYVGVQCKVGDDYA+IVVT QN+QLAS SA++A
Sbjct:  381 AENDSLKGSIVGSLGERGRELVAKCVPADTGGSLVTANPKQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASGGFLELTRYKLTEVLGRNCRFLQGPETDPKAVDKIRKAIDEGYDTSVCLLNYRADGTTFWNQFFVASLRDGKGDTVNYVGVQCKVGDDYAKIVVTEQNRQLASPSASSA 569

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BLAST of mRNA_H-elongata_contig57566.13227.1 vs. uniprot
Match: A0A126WXQ5_9PHAE (Putative LOV domain-containing protein n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A126WXQ5_9PHAE)

HSP 1 Score: 323 bits (827), Expect = 3.310e-108
Identity = 162/186 (87.10%), Postives = 169/186 (90.86%), Query Frame = 0

Query:    1 AENDSLKGSIVGSLGERGRELVAKCAPEDAGGTLVTTNPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASSGFLQLTRYKLTEVLGRNCRFLQGPETDPRAVDKIRTAIEEGYDTSACLLNYRADGTTFWNQFFVAALRDGEGATVNYVGVQCKVGDDYARIVVTAQNKQLASLSA 186
            AENDSLKGSIV SLG RGRELVAKC PEDA G LVT NPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFAS GFL+LT YKL +VLGRNCRFLQGPETDPRAVDKIR AIEEG D S CLLNYRAD TTFWNQFFVAALRDG GATVNYVGVQCKVGDDYARIVV+ QN++L++ SA
Sbjct:   77 AENDSLKGSIVSSLGGRGRELVAKCVPEDAEGPLVTANPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASGGFLELTGYKLMDVLGRNCRFLQGPETDPRAVDKIRNAIEEGSDASVCLLNYRADNTTFWNQFFVAALRDGAGATVNYVGVQCKVGDDYARIVVSEQNRKLSAPSA 262

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BLAST of mRNA_H-elongata_contig57566.13227.1 vs. uniprot
Match: A0A126WZ78_9PHAE (Putative LOV domain-containing protein n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A126WZ78_9PHAE)

HSP 1 Score: 317 bits (813), Expect = 1.020e-105
Identity = 161/188 (85.64%), Postives = 170/188 (90.43%), Query Frame = 0

Query:    1 AENDSLKGSIVGSLGERGRELVAKCAPEDAGGTLVTTNPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASSGFLQLTRYKLTEVLGRNCRFLQGPETDPRAVDKIRTAIEEGYDTSACLLNYRADGTTFWNQFFVAALRDGEGATVNYVGVQCKVGDDYARIVVTAQNKQLASLSAAA 188
            AENDSLKGSIV SLG+RGR LVA+CAPED GG ++T NPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFAS GFL+LT YKL+EVLGRNCRFLQGPETDPRAVDKIR AIEE  D S CLLNYRAD TTFWNQFFVAALRDG+G TVNYVGVQCKVGDDYARIVV+ QNKQLA  S +A
Sbjct:  109 AENDSLKGSIVQSLGDRGRTLVAECAPEDVGG-IITANPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASRGFLELTGYKLSEVLGRNCRFLQGPETDPRAVDKIRKAIEESADASVCLLNYRADMTTFWNQFFVAALRDGDGKTVNYVGVQCKVGDDYARIVVSEQNKQLAGPSGSA 295

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BLAST of mRNA_H-elongata_contig57566.13227.1 vs. uniprot
Match: A0A126WV07_9PHAE (Putative LOV domain-containing protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A126WV07_9PHAE)

HSP 1 Score: 310 bits (793), Expect = 2.710e-99
Identity = 155/182 (85.16%), Postives = 166/182 (91.21%), Query Frame = 0

Query:    2 ENDSLKGSIVGSLGERGRELVAKCAPEDAGGTLVTTNPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASSGFLQLTRYKLTEVLGRNCRFLQGPETDPRAVDKIRTAIEEGYDTSACLLNYRADGTTFWNQFFVAALRDGEGATVNYVGVQCKVGDDYARIVVTAQNKQLAS 183
            ENDSLKGSIV SLG+RGRELVAKC PE+A G L+T NP QATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASSGFL+LT YKL EVLGRNCRFLQGP TDP+AVDKIR AIE+  DTS CLLNYRADGTTFWNQFFVA+LRDG+G TVNYVGVQCKVGDDYARIVV  QN+QL++
Sbjct:  380 ENDSLKGSIVESLGDRGRELVAKCVPEEAEG-LITANPKQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASSGFLELTGYKLNEVLGRNCRFLQGPATDPKAVDKIRKAIEDKSDTSVCLLNYRADGTTFWNQFFVASLRDGDGNTVNYVGVQCKVGDDYARIVVGEQNRQLST 560

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BLAST of mRNA_H-elongata_contig57566.13227.1 vs. uniprot
Match: A0A6H5L7C4_9PHAE (BZIP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7C4_9PHAE)

HSP 1 Score: 289 bits (740), Expect = 4.890e-91
Identity = 152/204 (74.51%), Postives = 159/204 (77.94%), Query Frame = 0

Query:    2 ENDSLKGSIVGSLGERGRELVAKCAPEDAGGTLVTTNPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASSGFLQLTRYKLTEVLGRNCRFLQGPETDPRAVDKIRTAIEEGYDTSACLLNYRADGTTFWNQFFVAALRDGEGATVNYVGVQCKVG--------------------DDYARIVVTAQNKQLASLS 185
            EN+SLKGSIVGSLGERGRELVAKC P D GG+L          ILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFAS GFL LTRYKL EVLGRNCRFLQG ETDPRAVDKIR AI+EGYDTS CLLNYRADGTTFWNQFFVA+LRDG+G TVNYVGVQCKVG                    DDYA+IVV  QN+Q A  S
Sbjct:  387 ENESLKGSIVGSLGERGRELVAKCMPADTGGSL----------ILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASGGFLALTRYKLAEVLGRNCRFLQGAETDPRAVDKIRKAIDEGYDTSVCLLNYRADGTTFWNQFFVASLRDGKGNTVNYVGVQCKVGTESMYRRRIHAPLAAFECVGDDYAKIVVNEQNRQFAGQS 580

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BLAST of mRNA_H-elongata_contig57566.13227.1 vs. uniprot
Match: C5NSW4_9PHAE (Aureochrome1-like protein (Fragment) n=1 Tax=Fucus evanescens TaxID=87147 RepID=C5NSW4_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 1.720e-83
Identity = 129/143 (90.21%), Postives = 131/143 (91.61%), Query Frame = 0

Query:    1 AENDSLKGSIVGSLGERGRELVAKCAPEDAGGTLVTTNPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASSGFLQLTRYKLTEVLGRNCRFLQGPETDPRAVDKIRTAIEEGYDTSACLLNYRADGTTFWNQF 143
            AENDSLKGSIVGSLGERGRELVA  +PED  GTLVT NPTQATK LDDPDYSLVKALQTAQQN VITDASL DNPIVFASSGFL+LTRY LTEVLGRNCRFLQGPETDPRAVDKIRTAIEEG DTS CLLNYRADGTTFWN F
Sbjct:   54 AENDSLKGSIVGSLGERGRELVAMFSPEDEDGTLVTANPTQATKTLDDPDYSLVKALQTAQQNSVITDASLADNPIVFASSGFLELTRYTLTEVLGRNCRFLQGPETDPRAVDKIRTAIEEGCDTSVCLLNYRADGTTFWNLF 196

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BLAST of mRNA_H-elongata_contig57566.13227.1 vs. uniprot
Match: A0A7S2WVR6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVR6_9STRA)

HSP 1 Score: 256 bits (653), Expect = 1.790e-82
Identity = 125/177 (70.62%), Postives = 141/177 (79.66%), Query Frame = 0

Query:    1 AENDSLKGSIVGSLGERGRELVAKCAPEDAGGTLVTTNPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASSGFLQLTRYKLTEVLGRNCRFLQGPETDPRAVDKIRTAIEEGYDTSACLLNYRADGTTFWNQFFVAALRDGEGATVNYVGVQCKVGDDYARIVVTAQ 177
            AEND L+ +I   +G    EL+A C   +  G+L+  NP  AT+ILDDPDYSLVKALQTAQQNFVITD SLPDNPIVFASSGFL LT Y L +VLGRNCRFLQGPETDPRAV KIR AI+EG+DTS CLLNYR DG+TFWNQFFVA LRD EG  VNYVGVQCKV DD+AR +  ++
Sbjct:   76 AENDKLRAAITEHMGSEADELLAACT--EGTGSLIAANPNDATRILDDPDYSLVKALQTAQQNFVITDPSLPDNPIVFASSGFLTLTGYSLDQVLGRNCRFLQGPETDPRAVHKIRKAIQEGFDTSVCLLNYRIDGSTFWNQFFVAPLRDSEGNVVNYVGVQCKVSDDFARAIAQSE 250

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig57566.13227.1 vs. uniprot

BLAST of mRNA_H-elongata_contig57566.13227.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A126WYY7_SARFS	1.960e-112	86.98	Putative LOV domain-containing protein n=1 Tax=Sar...	[more]
A0A126X4A7_9PHAE	2.090e-112	86.98	Putative LOV domain-containing protein n=1 Tax=Sar...	[more]
A0A126X308_SARHM	4.760e-111	82.08	Putative LOV domain-containing protein n=2 Tax=Sar...	[more]
A0A126X2D5_9PHAE	1.160e-110	88.89	Putative LOV domain-containing protein n=1 Tax=Scy...	[more]
A0A126WXQ5_9PHAE	3.310e-108	87.10	Putative LOV domain-containing protein n=1 Tax=Des...	[more]
A0A126WZ78_9PHAE	1.020e-105	85.64	Putative LOV domain-containing protein n=1 Tax=Dic...	[more]
A0A126WV07_9PHAE	2.710e-99	85.16	Putative LOV domain-containing protein n=1 Tax=Ish...	[more]
A0A6H5L7C4_9PHAE	4.890e-91	74.51	BZIP domain-containing protein n=2 Tax=Ectocarpus ...	[more]
C5NSW4_9PHAE	1.720e-83	90.21	Aureochrome1-like protein (Fragment) n=1 Tax=Fucus...	[more]
A0A7S2WVR6_9STRA	1.790e-82	70.62	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000014	PAS domain	PFAM	PF13426	PAS_9	coord: 71..161 e-value: 5.5E-15 score: 55.5
IPR000014	PAS domain	TIGRFAM	TIGR00229	TIGR00229	coord: 73..160 e-value: 2.6E-6 score: 25.6
IPR000014	PAS domain	PROSITE	PS50112	PAS	coord: 49..122 score: 9.363
None	No IPR available	GENE3D	3.30.450.20		coord: 63..195 e-value: 8.4E-40 score: 138.1
None	No IPR available	PANTHER	PTHR47429	FAMILY NOT NAMED	coord: 49..166
IPR035965	PAS domain superfamily	SUPERFAMILY	55785	PYP-like sensor domain (PAS domain)	coord: 64..162

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig57566	contig	H-elongata_contig57566:318..3585 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig57566.13227.1	mRNA_H-elongata_contig57566.13227.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig57566 318..3585 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig57566.13227.1 ID=prot_H-elongata_contig57566.13227.1|Name=mRNA_H-elongata_contig57566.13227.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=240bp
AENDSLKGSIVGSLGERGRELVAKCAPEDAGGTLVTTNPTQATKILDDPD
YSLVKALQTAQQNFVITDASLPDNPIVFASSGFLQLTRYKLTEVLGRNCR
FLQGPETDPRAVDKIRTAIEEGYDTSACLLNYRADGTTFWNQFFVAALRD
GEGATVNYVGVQCKVGDDYARIVVTAQNKQLASLSAAAAASRWAALPPTG
QPSSNPPVAGMASAAPAAPASVPSSAAAVAGARPSGSQI*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000014	PAS
IPR035965	PAS-like_dom_sf