prot_H-elongata_contig57514.13221.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig57514.13221.1
Unique Nameprot_H-elongata_contig57514.13221.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length315
Homology
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BLAST of mRNA_H-elongata_contig57514.13221.1 vs. uniprot
Match: D8LC27_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC27_ECTSI)

HSP 1 Score: 224 bits (570), Expect = 1.170e-62
Identity = 180/364 (49.45%), Postives = 216/364 (59.34%), Query Frame = 0 
Query:    1 QRRSDLKKEAIRAKRGPYQAFDDEEFEGEIGPGAKRKVLSHYDEVKKDGPRLTLGQGGTARDGXXXXXXXXXXXXXXXXXXXXXXXVEVKDASEYFTTEEMVKMRKXXXXXXXRLRKREEAGASSSLGLEAAIQDSSNSSAIGGA-------------------------DHGSRATRAVK---GEESSNG-DSSKRFERAMEKASVRANEKLADSFAKPPTPIDQIAPPLXXXXXXXXXXXXXXXADPMPFAEELDTDLGVSLARARRLAQMKEKARERKARDVGEASQQVLSQRRVKTELVEQG---------------------------VAVKKELKEEEEGAEGAIVFTSTTEFTTRLE 308
            +RR +L KEAIRAKRG YQA+DDEEFEGEIGPGA+RKVLSHYDE KK+GPRLTLGQGGTARD                        V+VKDASEY+TTEEM K +K XXXXXX             LGLEAA+ DSS                                 DHGSRA+RA +    E++  G D  KRF+ A+ +A  RA+EKLADSFAKPP             XXXXXXXXXXXX +P  FAEELD+DLGVSLARARRLAQMK+KA+ RK+RD+GEA +  +++++VKTE  E+G                           V+VK+E+     G +G +VFTSTTEFT+RLE
Sbjct:  336 ERRKELDKEAIRAKRGAYQAYDDEEFEGEIGPGAERKVLSHYDEAKKEGPRLTLGQGGTARDAAAAEGGEEGEKKKVLESLK----VDVKDASEYYTTEEMAKFKKPXXXXXXXXXXXXXXXXXXXLGLEAALHDSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHGSRASRAARLAASEKADRGEDKRKRFDTALARAGERASEKLADSFAKPPX------------XXXXXXXXXXXXXEPEAFAEELDSDLGVSLARARRLAQMKDKAKARKSRDIGEAVRDAMARKKVKTEAAEEGPKAEDNXXXXXXXXXXXXMAVDXXXXXVSVKEEV-----GGDGGMVFTSTTEFTSRLE 678
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57514.13221.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LC27_ECTSI1.170e-6249.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005011SNU66/SART1 familyPFAMPF03343SART-1coord: 6..308
e-value: 5.6E-22
score: 78.1
IPR005011SNU66/SART1 familyPANTHERPTHR14152SQUAMOUS CELL CARCINOMA ANTIGEN RECOGNISED BY CYTOTOXIC T LYMPHOCYTEScoord: 5..308

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57514contigH-elongata_contig57514:699..3678 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57514.13221.1mRNA_H-elongata_contig57514.13221.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig57514 699..3678 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig57514.13221.1 ID=prot_H-elongata_contig57514.13221.1|Name=mRNA_H-elongata_contig57514.13221.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=315bp
QRRSDLKKEAIRAKRGPYQAFDDEEFEGEIGPGAKRKVLSHYDEVKKDGP
RLTLGQGGTARDGGAAGPAGDEERAGKAVKVKESLKVEVKDASEYFTTEE
MVKMRKPKKMRKKRLRKREEAGASSSLGLEAAIQDSSNSSAIGGADHGSR
ATRAVKGEESSNGDSSKRFERAMEKASVRANEKLADSFAKPPTPIDQIAP
PLPPAPPTSTTPSPPVPADPMPFAEELDTDLGVSLARARRLAQMKEKARE
RKARDVGEASQQVLSQRRVKTELVEQGVAVKKELKEEEEGAEGAIVFTST
TEFTTRLEVRYKCW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005011SNU66/SART1